Trachemys scripta elegans (red-eared slider): 117877155
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Entry
117877155 CDS
T07347
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117877155 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117877155 (ARID2)
03021 Transcription machinery [BR:
tst03021
]
117877155 (ARID2)
03036 Chromosome and associated proteins [BR:
tst03036
]
117877155 (ARID2)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
ARID
117877155 (ARID2)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117877155 (ARID2)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
117877155 (ARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
DUF5532
Motif
Other DBs
NCBI-GeneID:
117877155
NCBI-ProteinID:
XP_034625869
LinkDB
All DBs
Position
1:55300474..55467089
Genome browser
AA seq
1833 aa
AA seq
DB search
MANSTGKTQPDQRRKGLAFLDELRQFHHSRGSPFKKIPVVGGKELDLHALYTRVTTLGGF
GKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVQPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGDEWKEKTDRDFVKFWKDI
VEDNEVRDLISDRNKSQDVPSEEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMARDRFLKMRGMEILGNLCKAEDNGVLICEYVDQESYKEIICHLTLPDVLLVISALE
VLYMLTEMGEVACTKIAKVDKSIDTLVCLVSMDIQMFGPDALTAVKLIEHQSSNHQVSEI
RPQAVEHVSSQAHATAVPASRAAQHIAPPPGIVEIDSEKFACQWLNAHFEVNSDCSVSRA
EMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDPNNNGQAHIHVVGVKRRA
IPLPIQMYYQQQPTSATPVVRVDSIPDVSPSPSPAGIPHGPQSVGNHFQRIPVNNQSSNL
TATQMSFPIQGVHTVAQTVSRIPQNPSVHTQQQQNATVTVIQNKTPISCEVVKATVIQSS
VSQSAVPVTIAVGGAAQASNQNHSSAGPQPSVAVVSSQTLLHHQPVIQQQSPLHAVVPGQ
IPSGTPVTVIQQAVPQGHIFGRVQNLPACTSAVSQGQQLITTSSQPLQTSSQQPSAGNQQ
QDTVIIAPQQYVTTSASNIVSATTVQNFQVAAGQVVTIAGVQNPQTSRVGFQNIAPKPLP
SQQVPSTVVQQPMQQQQPPSQQSVVIVSQPTQQGQTYAPAIHQIVLTNPASLPAGQTVQL
TGQPNITPSSSPSPGPVTNNQVPTVMSSPSTAQSQGPPPTVSQMLSVKRQQQQQHSPAPS
QQQVQVQVQQQQPVQMQVQPPQANAGVGQPSSGESSLIKQLLLPKRGPSTPGGKLILPAP
QIPPPNNARAPSPQVVYQVANNQAPSFGVQGQSPAQQLLVGQQNVQLVQSAIQPQGAVQT
VPISNLQILPGQLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNTTQLIAPAGIS
MSGTQTGVGLQVQTLPATQAPPAGQSPCAAAPPFKGDKIICQKEEEAKEATGLHVHERKI
EVMENPSCRRGAANTSNGDAKENEMQVGSLLNGRKYNDSSLPPSNSGKTQNEANQCSQVS
NGPSLELGENGAPGKQNFEQMDTQEIKSDLKKPLVNGICDFDKGDGSHLSKNIPNHKTSN
HVGNGEISPVEQGNSDVTQQETAKGDQGERISNGPILTLNSSPVVSGTQEAAKLLTQQLS
GTNTDLPNGPLASSLNSDVPQQRPSVVVSPHSTASVIQGHQIITVPHSGPRVSQSTLSSE
VRSTNGTAEFKTVKRPAEDNDRETVPGIPNKVGVRIVTISDPNNAGCSATMVAVPAGADP
STVAKVAIESAVQQKQQHPTTYIQSMVTQSTPVTPVPTMQVQGQQINLQPSSYPAPSQHG
EQVKKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFSF
ITHLQDKHCSRDALLAGLKQDEHGQAGNQKPSNKQPTAGGSTSTPRAQKAIVNHPSAALM
ALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENHLSVLAI
SNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacgggtaaaacccaaccagaccagcggagaaagggactcgctttcctg
gacgagctgcggcagtttcaccacagcagagggtctccttttaagaagatccctgtggtg
ggtgggaaggagctggatcttcacgctctctacaccagagtcaccactttaggcggattt
gggaaggtatctgagaagaatcagtggggagaaattgtagaggagtttaactttcccaga
agttgttctaatgctgccttcgctttaaaacagtattacttgcgctatctagaaaagtac
gagaaagtacatcattttggggaggacgatgatgaggtacaaccaggcaatccaaagcca
caacttcctataggtgcaattccatcttcctacaattaccaacaacacagtgtgtcagat
tatcttcgtcaaagctatgggctgtctatggactttaattcgccaaatgactataataaa
ttggtgctttcactgttatctggactcccgaatgaagtggactttgctattaatgtgtgc
actcttctgtcaaatgaaagcaagcatgtcatgcagcttgaaaaggaccctaaaatcatc
actctactgcttgctaatgctggggtatttgatgacactttaggatcattttctactgta
tttggagacgaatggaaggagaaaactgatagagattttgttaagttttggaaggatatt
gtcgaggataatgaagtacgtgacctcatttctgacagaaacaaatctcaagatgttcca
tcagaagaatggatatgggaatccttatttcatccacctcgcaagttgggcattaatgat
attgaagggcagcgggtacttcagattgcagtgatattgcgaaatctttcctttgaggag
ggaaatgttaaacttttggcagctaatcgtacctgtcttcggttcctgctactctctgct
catagtcattttatttctctacgacaattggggcttgacacactaggaaatattgcagca
gagcttctgttggaccctgttgatttcaaaactactcatctaatgtttcacactgttaca
aaatgcctaatggcaagggatagattcttaaaaatgagaggcatggaaatcttggggaat
ctttgtaaagctgaagataatggtgtattaatttgtgaatatgtggatcaagaatcctac
aaagaaataatatgtcatctcactttaccagatgtgctgcttgtaatctcagcactcgaa
gttctatacatgctcacagaaatgggagaagtggcctgcacaaagattgctaaagtagac
aagagcatagatacattagtatgtctggtttctatggacatccagatgtttggacctgat
gcacttactgcagtaaaactcattgaacatcaaagctccaaccatcaagtatctgaaatc
aggccacaggcggtggagcatgtttcctcacaggcccatgcaacagctgtcccagcatca
agagcagcacagcatattgctccaccaccaggaatagtggaaatagatagtgagaaattt
gcatgtcagtggttgaatgcacattttgaggtgaattcagattgctcagtctctcgagca
gaaatgtactctgaatacctctcaacctgcagtaaattagctcgaggtggaatcctaaca
tcaactggattttataaatgtcttcgaactgtctttccaaatcacacagtgaagagagta
gaggatccaaataacaacgggcaggcacatatacatgtagtaggagttaaaaggagagct
ataccacttcccattcagatgtactatcagcaacaaccaacttctgctacccctgtcgtc
cgggttgattctattcctgatgtatctccgtctccttcaccagcaggaatcccacatgga
ccacaaagtgtagggaaccattttcagaggatcccagttaacaaccaatcttcaaatctg
acagcaacacagatgtcttttccaattcaaggtgttcacactgtggcacagactgtttct
agaattccacaaaatccttcagttcacacacagcagcaacaaaatgctacagtgactgtc
attcagaataaaactccaatttcctgtgaggtagtcaaggccacagtaatacagagctca
gtttcccaatctgcagttcctgttactattgctgtaggtggagcagcacaagcttctaat
caaaatcacagcagtgcaggaccacaaccatctgttgctgttgtcagttctcagacattg
cttcaccaccaaccagtaattcaacaacagtctccattacatgcagtggtaccaggacag
ataccttcaggcactcctgttacggtaattcaacaagctgtacctcagggtcatatattt
ggcagagtacagaacctaccagcatgcacttcagcagtttcacagggtcaacagttaatc
actacatcatcacaacctttgcaaacttcatctcagcagccctctgctggtaaccagcaa
caagacacagtcatcatagcaccccaacaatatgtcacgacctctgcatccaatattgtt
tctgccactacagtacagaattttcaggttgcagctgggcaggtggttactattgctggt
gtccaaaatccacaaacttctagggtagggtttcagaatattgcgccaaagcctctacct
tctcagcaagtcccatctacagtggtacaacaacccatgcagcagcagcagccaccatcc
caacaaagtgtagtgattgtaagccagccaactcagcaaggtcaaacatatgcaccagcc
attcaccaaattgtgctaactaatccagcttctcttccagctggtcaaactgtccagttg
actggacaaccaaacataactccatcttcctcaccatctcctggaccagttacaaataac
caggttcctacagtaatgtcatctccatctactgctcagtcacaaggaccccctcctact
gtcagtcagatgctttccgtgaagaggcagcaacagcagcaacattcgcctgcgccatca
caacaacaggtacaagtacaagtccagcaacaacaaccggtacaaatgcaagttcagcca
ccgcaagctaatgcaggagttggtcagccttcctctggtgaatctagtctgataaaacag
ctgcttcttccaaaacgaggcccttcaactcctggtggtaagcttatactcccagctcca
cagattcctccacctaacaatgcaagagctcctagtcctcaggtggtttatcaggtggcc
aataaccaagcaccaagttttggagttcaaggacagtctccagctcagcagctattagtt
ggacagcaaaatgttcagctggtccagagtgcaatccagccccaaggggcagtacaaaca
gtacccatttctaatctacaaatattgccaggccagttgatctcaaatagcccagcaacc
attttccaagggacttctggcaaccaggttaccataacagttgtgccaaatactagtttt
gctactgcaactgtgagtcagggaaatacaactcagcttattgctccagcaggaatctca
atgagtggaacacagacaggagttgggcttcaggtgcaaacacttccagctactcaagca
cctccagctggacaatcaccatgtgctgctgctcctccattcaaaggtgataaaataatt
tgccaaaaggaggaagaagcaaaggaagcaacaggtttacacgttcatgaacgtaaaatt
gaagttatggaaaatccctcttgccgaagaggagctgcgaacaccagtaatggggatgca
aaggaaaatgaaatgcaggtgggaagtcttttaaatgggagaaagtataatgactccagt
ctacctccttctaactcagggaaaactcaaaatgaggccaatcagtgctcacaagtcagt
aacgggccatcattagaattgggtgagaatggagctcctggaaagcagaactttgaacaa
atggacacacaggaaattaaaagtgatttgaagaagcccctagttaatggaatctgtgat
tttgataaaggagatggttctcatttgagcaaaaacattccaaatcacaaaacttccaat
catgtaggaaatggtgagatctctccagtggaacaagggaattcagatgtcacgcagcaa
gagactgccaaaggtgatcaaggggaaaggatttctaatgggcctatattaactttgaat
agttcacctgttgtaagcggtacacaggaagctgcaaaactgttaacccagcaacttagt
ggtaccaacactgatttacccaatggacctttagcttcaagtttgaattcagatgtgcct
cagcaacgcccaagtgtagttgtctcaccacattctacagcctctgttatacaggggcat
caaatcataacagttccacactcaggacctagagtgtcccagtctaccctgtcatctgaa
gttcggtctactaatggcacagcagaattcaaaactgtaaagaggccagcagaggataat
gatagggaaactgttccagggattccaaataaagtaggagttagaattgttacaatcagt
gaccccaacaatgccggttgcagtgcaactatggttgctgtgccagctggagcggatcca
agcactgtagctaaagtagcaatagaaagcgctgttcagcaaaagcagcagcatccaaca
acatatatacaaagcatggtcacacagagcacacctgtgacaccggtaccaacaatgcaa
gtacagggccagcagatcaatttgcagccttcttcatacccagcaccaagtcaacatggc
gagcaagtgaaaaaacctggacagaacttcatgtgtctgtggcaatcttgtaaaaagtgg
tttcaaacaccatcacaagttttttatcatgcagcaactgaacatggaggaaaagacgtc
tatccagggcagtgcttatgggagggttgtgaacctttccagcggcagaggttttccttc
attacccacttacaggataagcactgctccagagatgctctacttgcaggattaaaacaa
gatgaacacggacaagcaggaaatcagaaaccttccaataagcagccaactgcagggggt
agcacctctactcctagagcacagaaggctattgtgaatcatcctagtgctgccctcatg
gcactaagaaggggatcaagaaaccttgtcttcagagatttcacagatgaaaaagaggga
ccaataactaaacacatccgattaacagctgccttaatattaaaaaatattggtaaatat
tcagaatgtggtcgcagattgctaaagagacatgaaaatcacctatcagtgctagccatt
agtaacatggaagcttcctccacacttgccaaatgcctttatgaacttaattttacagtc
cagagtaaagaacaagaaaaagactctgaaatgctgcagtga
DBGET
integrated database retrieval system
