Trachemys scripta elegans (red-eared slider): 117877170
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Entry
117877170 CDS
T07347
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117877170 (CTR9)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
117877170 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_6
TPR_7
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
117877170
NCBI-ProteinID:
XP_034625898
LinkDB
All DBs
Position
4:complement(96430224..96457632)
Genome browser
AA seq
1176 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQDKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGRRSRKGGEFDEFVNDESDEDLPVSRKKKRRKGSGSEQDGEEEDGERKKKKRRRP
QKGDDGTDDEENENGPRPKKRRPPKAERKKAAKPERLPPSMKGKIKSKAIISSSEDSSDE
DKLKIADDGNARNSNSDSDDAEQQRNKRIMSDSDSDNRNKSGSEVGSPRRSSAHPSDEDS
DSDRSARKKRRSDSEQSDNESVQSGRSHSVQSGRSHSGGSENESRPASRSGDSDRDSDRG
SDNEGSGRESGNESEPEASNIEGSEHGSEGGSDDSD
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcggctcgatcgagatccccctccgggacactgacgaggtcattgagcttgac
ttcgatcagttaccggagggggatgaagttataagtatcctgaaacaggaacatactcag
ctgcacatatggattgctttagcgttggaatattacaaacaaggaaaaacagaagatttt
gtgaaactgttggaagctgcacgaatagatggtaacttggattatagagaccatgaaaaa
gatcagatgacatgcttggatactctggcagcatactatgtacagcaggcacggaaggaa
aagaataaagacaacaagaaggagctcattacacaagctaccctgctgtatactatggct
gacaaaattatcatgtatgatcagaatcacttgttgggaagagcctgcttctgtctgctg
gagggtgataaaatggaccaggctgacgcccagtttcattttgtgctcaaccagtctcca
aataatattccagccctccttggtaaagcatgcatttcgttcaacaagaaagattataga
ggagcccttgcctactacaaaaaagcactgcgaaccaacccaggttgtccagctgaggtt
cgattaggcatgggccattgcttcgtgaaactgaacaagttggaaaaagctcgtctggca
ttcagcagggccctggagctcaattcgaaatgtgtaggggctttggttggattggctgtt
ctagagctcaataacaaagaggctgattctatcaaaaatggtgttcaactcctttctaga
gcttacacaattgatcccagtaacccaatggtgctgaaccacttggctaatcacttcttc
ttcaaaaaggattatggtaaagtccagcacttggctctccatgctttccataatacagaa
gttgaagctatgcaggcagagagttgctaccagctggcccggtcttttcacgtacaggaa
gattatgaccaagctttccagtattactaccaagccacgcagtttgcctcatcctctttt
gtattaccattttttggattgggtcaaatgtacatttatcggggggacaaggagaatgca
tcacaatgctttgaaaaagttttgaaagcctaccctaacaattatgagactatgaaaatc
cttggatctctttatgctgcttcagaagaccaagataaacgagatattgcaaaaggtcac
ttgaagaaagtcacagaacagtatccagatgacgtagaagcgtggattgaactagcgcaa
atccttgagcagactgacatacagggtgccctctcagcctatggaacagcaacacgcatc
cttcaggagaaagtgcaggctgatgtcccaccagagattttgaataatgtgggtgctctc
cattttaggcttggaaacctaggtgaagcaaagaaatactttttggcatctctggatcgt
gctaaggcagaagctgaacatgatgagcattactacaatgctatctcagtaacaacgtcc
tataatcttgccagattatatgaggcaatgtgtgaattccatgaagcagaaaagctatat
aaaaacattttaagagaacatcctaactatgttgactgctatttgcgcttaggagctatg
gctagagataaaggcaatttttatgaggcttctgattggtttaaagaagcacttcaaata
aatcaggaccatccagatgcttggtctttaattggtaatcttcacttggctaaacaagag
tggggtccaggacagaagaaatttgaaaggatattgaaacaaccatccacgcaaaatgac
acttactccatgctggctcttggtaatgtctggttgcaaactttgcatcagcccaccagg
gatagagagaaggaaaagcgccatcaagatcgtgcactagcaatctacaagcaagtactt
agaaatgatccaaagaatttgtatgctgctaatggcataggagctgtattggcacacaaa
ggatatttccgtgaggctcgtgatgtttttgcccaagtgagagaggcaacagcagatatc
agtgatgtgtggctgaatttggcacacatctacgtagaacagaagcagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcagaatactgaagtatta
ttgtacttggcccgagcactcttcaaatgtggcaaattacaggaatgcaaacagactttg
ctgaaggctagacatgtagcacccagtgatacagtccttatgtttaatgtggctctagtg
ctacagaggctagccacctctgtcctgaaagatgaaaaaagtaacctgaaggaagtacta
aatgctgtgaaagaactggagttagcccacagatacttcagttatttaagtaaagtagga
gataaaatgagatttgatttggctcttgctgctactgaagccaggcaatgctctgattta
ctgagccaagctcagtatcatgtggctcgtgcacgcaagcaggatgaagaagagagagaa
ctgcgtgccaagcaagaacaagaaaaggagttgctccgccaaaaactgcttaaagaacag
gaagaaaaacgtctccgagagaaagaagaacagaagaaacttctggaacaaagagcccaa
tatgtggagaagaccaagaatattttgatgtttactggagaagtagaaggatcgaaggag
aagaaacgtggtggcggaaggcgttccaggaaaggaggagaatttgatgagtttgtcaat
gatgagagtgacgaagatctgcctgtgtccagaaagaaaaagaggaggaaaggcagtggt
agtgaacaggatggtgaagaagaagatggagagaggaagaagaaaaagaggaggagaccc
cagaaaggagatgatggaactgatgatgaagaaaatgaaaatggcccaagacctaaaaaa
cgacgtccacccaaagcagagaggaaaaaggctgccaagccagaacgtctgcctccttca
atgaagggaaagatcaaatcaaaagccataatttcatctagtgaagattcttctgatgag
gataaactcaaaattgctgatgatggaaatgccaggaacagcaacagtgattctgatgat
gctgaacagcagcgcaataaacgcatcatgtcggacagcgattcagataacagaaacaag
tctggtagtgaggtaggtagtccacggaggtccagtgctcatccatctgatgaggattct
gacagtgacaggtcagccagaaagaagagacggtcagattcagaacagtctgacaatgag
tctgtgcaatctggaagaagccactctgtacagtcgggaagaagtcactccggtggctca
gagaatgaatctcgtccagcttctcgcagtggtgattcagacagagactctgatagagga
tctgacaacgagggctctggcagagagtctggcaatgaatctgaaccagaggcatccaac
atcgaggggtctgaacatggatcagaaggtggatcagatgatagcgattag
DBGET
integrated database retrieval system
