Trachemys scripta elegans (red-eared slider): 117877251
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Entry
117877251 CDS
T07347
Symbol
ABCC8
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117877251 (ABCC8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117877251 (ABCC8)
Transporters [BR:
tst02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
117877251 (ABCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_21
nSTAND1
AAA_25
RsgA_GTPase
DEAD
TMD0_ABC
TraD_N
Motif
Other DBs
NCBI-GeneID:
117877251
NCBI-ProteinID:
XP_034626073
LinkDB
All DBs
Position
4:complement(102311131..102447647)
Genome browser
AA seq
1617 aa
AA seq
DB search
MPGREANPAAFSAATVYVCVDAPPSPARCAQRPSSSTMSLAFCGNENNSAAYNVEKGVLN
NGCFVDALNVVPHVFLLFITFPILFIGWGSQSSKVHIHHSTWLHFPGHNLRWILTFILLF
VLVCEIAEGIVSDGVSESRHLHLYMPAGMAFLAAITSVVYYHNIETSNFPKLLIALLFYW
TLAFITKTIKFVKFCDNGVGFSQLRFCLTGLLVILYGMLLSVEINVIRVRRYVFFKTPKE
VKPPEDLQDLGVRFLQPFVNLLSKGTYWWMNTFIKTAHKKPIDLKAIGKLPIAMRALTNY
IRLNEAFEAQKNKRSPYPQGSKSIWCALCWAFGRPLVLSSTFRILADLLGFAGPLCISGI
VHHVGKGNNTIRPQIKILGVFFISSQEFLANAYVLAVLLFFALLLQRTILQASYYVAIET
GINLRGAIQTKIYNKIMQLSTSNMSMGEMTAGQICNLVAIDTNQLMWFFFLCPNLWAMPV
QIIVGVLLLYYLLGISALIGAVVIIVLAPVQYFVATKLSQAQRSTLEYSNERLKKTNEML
RGIKLLKLYAWEHIFHSSVEETRQKEMTSLKAFALYTSISIFMNAAIPIAAVLTTFVVHA
HLTGNADFSPSVAFASLSLFHILVTPLFLLSSVVRSTVKALVSVQKLSEFLSSEEIGEEH
DKCSEPRCADNHSKYQVVPLKVVNRKRPAREDWNNYSSHMRRPVNITEGDDFCVKITNGF
FTWTPEGSATLSNIDIRIPQGQLTMIVGQVGCGKSSLLLATLGEMQKTSGNVFWNSSIPD
SETGEDVSPEKETAVDTEVRKRGSVAYASQKPWLLNATVEENIIFESPFNKQRYKAVIDA
CSLQPDIDILPHGDQTQIGERGINLSGGQRQRISVARALYQQTNVVFLDDPFSALDIHLS
DHLMQEGILKMLREDKRTIVLVTHKLQYLPHADWIITMKDGTIQREGTLKDIQKSESELF
EHWKTLMNRQDQELEKETIIERKPVLERKNLRRTRYSREALLKDDEEDEEEITESDDDDN
LSSVLHQRAKMPWRACGKYLSSAGILLLPLLVLSQLLKHTVMVAIDYWLAQWTSDVISAK
SDVEQKNCSACQEFNHSRYSRVFSILCCLGIILCLVTSIAVEWTGLKVAKKLHYCLLNKI
ILAPMRFFETTPLGSILNRFSADCNTIDQHIPATLECLSRSTLLCVSALAVISFVTPMFL
IALLPLAIICYFIQKYFRVASRDLQQLDDSTQLPLLCHFSETVEGLTTIRAFRYEGRFRQ
KLLEYTDSNNIASLFLTAANRWLEVRMEYIGACVVLIAAVTSITKSLYNQLSSGLVGLGL
TYALMVSNYLNWMVRNLADMEIQLGAVKRINGLLKTEAENYEGLLSPSQIPQNWPARGEI
QIQNLSVRYDSNLKPVLKHVSAHISPGQKIGICGRTGSGKSSFSLAFFRMVDTFEGRIII
DGIDIAKLPLQTLRSRLSIILQDPILFSGTIRFNLDPEKKCTDSMLWEALEIAQLKHVVK
ALPGGLDAIVTEGGENFSQGQRQLFCLARAFVRKTSIFIMDEATASIDMATENILQKVVM
TAFADRTVVTIAHRVHTILNADLVIVMKRGVILEYDKPEVLLEQEDSVFASFVQADK
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgccggggagggaggccaaccccgccgccttcagcgccgcgacagtctatgtgtgtgtg
gatgcgcccccctcccctgcgcgctgcgcgcagcgtcccagctcctccaccatgtccttg
gcgttctgtggcaatgagaataactcggccgcttacaacgtggagaaaggggtgctcaac
aacggctgctttgtcgacgcgctcaacgtggtgccgcacgtcttcctgctcttcatcacc
ttccctatcctcttcataggatggggaagtcagagttccaaagttcatatacatcatagc
acttggcttcattttcccggccacaatttacgttggatcttgactttcatccttttgttt
gtgctggtgtgtgaaatagcagagggcatagtgtcagatggggtttcagaatcccgtcat
ttgcacctgtacatgccagctggtatggcattcttggcagccatcacatctgttgtttac
taccataacatcgaaacatcaaattttccaaagttattaatagccttgctgttctactgg
accttagcttttataaccaaaactatcaaatttgtaaagttctgtgataatggggttgga
ttttctcagcttcgattttgcctcacgggacttctggttattctatatggaatgctacta
tctgtagaaattaatgtcatcagggtgaggagatacgttttcttcaaaacccccaaagag
gttaagccacccgaggatcttcaggatcttggagttcggttcctacagccctttgtgaat
ctgctgtccaaaggaacatactggtggatgaatacattcatcaagaccgcccataaaaag
ccaatagacttgaaagccataggcaagctgcctatcgccatgagagctctgacaaattac
attcgccttaatgaggcttttgaagcacaaaagaacaaaaggtctccatatccacaagga
tccaaatcaatttggtgcgctctctgctgggcatttgggagaccactagttctcagcagc
actttccgtattctggctgacttgcttgggtttgctggtccgctctgtatctctgggatt
gttcaccacgttggaaaaggaaataacaccatccgtccgcagattaaaattcttggtgtt
ttctttatttcatctcaagagttcctggccaatgcctatgttttggctgtccttctattt
ttcgcccttctgttgcaaaggacaattctccaggcatcatactatgtcgccattgaaact
ggaattaacttgagaggagcaattcagacaaaaatatacaataagattatgcaactgtcc
acttcaaacatgtctatgggggaaatgactgcaggccagatctgtaacctggttgccata
gatacaaaccaactgatgtggttcttcttcctctgccctaacctttgggctatgcctgtg
cagattattgtaggtgtgcttctgctctactacctgcttggaatcagtgccttaattgga
gcagtagtgatcatagttcttgcacctgtccagtactttgtggcaacaaaactctcacag
gcccaaagaagcacattggaatattccaatgagagactgaagaaaacaaatgagatgctt
cggggcattaaactccttaaactctatgcctgggaacatatctttcacagcagtgtggag
gaaacccggcaaaaggaaatgaccagccttaaggcctttgctctctatacctccatatca
attttcatgaatgcagcaataccaattgcagctgtacttacaacatttgtggtccatgcc
cacctgactggaaacgctgacttctccccatcagtggcctttgcctcactctctctcttt
cacattcttgtcaccccgctgttcctgctctccagtgtggtcagatctactgtcaaagct
ctggtcagtgtgcagaaactgagtgaatttttgtcaagtgaagaaattggagaagagcat
gataaatgttcagagccaagatgtgcagacaaccacagcaaataccaggtggttcccctc
aaagttgttaaccgtaagaggcctgccagagaagactggaacaattacagctctcacatg
agaagacctgttaacatcacagaaggagatgatttttgtgtaaagatcacaaatggattt
ttcacctggacgcctgaaggatctgcgacattgtccaacattgatatccgaatccctcaa
ggtcagttaacaatgatcgtaggacaggtgggctgtggtaagtcttcactcttactagcg
acacttggggagatgcagaagacttccgggaatgtattctggaacagcagtattcctgac
agcgagacaggggaagatgtcagcccagagaaggaaaccgctgttgacacggaagtcagg
aaaagaggatcagtggcatatgcctcacagaaaccatggctgctcaatgctactgtggaa
gagaatatcatttttgaaagccccttcaacaaacaaagatacaaagcagtgattgatgct
tgctcccttcagcctgatattgacattcttcctcatggagaccaaacccagattggagag
aggggtatcaatctttctggagggcagcgtcagcgcatcagtgtggcaagagcactttac
cagcagacaaatgttgtgttcctagacgatccattttcggcactggatatccacttaagt
gaccatcttatgcaggaagggatcctgaaaatgctaagggaagacaagaggaccattgtt
ctggtcacccacaaactacagtacctgccacatgctgactggatcattacaatgaaggat
ggtaccattcaaagagaagggacactcaaggacattcagaaatcagagtctgagctcttt
gaacactggaaaacactcatgaatcgacaggaccaagaactggagaaggaaactataatt
gaaagaaaacctgttttggagaggaagaacctcaggaggaccaggtattcccgagaagct
ctgctaaaagatgatgaagaggatgaagaagaaataacagaaagcgatgatgatgacaac
ctatcttctgtgcttcatcagagagcaaagatgccttggcgagcctgtggaaagtacctc
agctcagcagggattctgctcttgcctttactggtcctttcacagctcttaaaacacaca
gttatggtggctattgactactggcttgcacagtggacatctgatgtaatttctgcaaag
agtgacgtagaacaaaagaattgttctgcatgccaggaatttaatcattctcgctattca
agggtgttcagcattctctgctgccttgggattatattgtgtcttgtcacgtcaatagca
gtggagtggactggtctaaaagttgccaaaaaactacactattgtctgctgaataaaatt
attttggcaccaatgagattttttgaaacaacaccactgggaagcatcttgaacagattt
tcagctgattgcaacaccatcgaccagcacattcctgctaccctggaatgcctgagccgc
tccactttgctgtgtgtatccgctcttgcagtaatttccttcgtcacgccaatgtttctc
attgccctgcttcctctcgctatcatatgttatttcatccagaaatactttcgagtggcc
tcaagggacctgcaacagttggatgacagcacccagctgccattactttgccatttttca
gagactgtggaaggtttaaccactatacgagctttcaggtatgaaggccgattccgacag
aagcttcttgaatatacagattccaacaatatcgcttcccttttccttacagctgccaat
cgctggctggaagttcgcatggaatacattggagcgtgtgtggttctcatagcagctgtg
acttctattaccaagtccctgtacaatcagctgtcttcaggacttgtgggcttagggcta
acctatgctcttatggtgtctaattacctgaactggatggttcgtaacctggctgatatg
gagatccagctgggagcagtgaaaagaatcaatggccttctaaaaacagaagctgaaaat
tatgaagggctcctttctccttcgcagattcctcagaactggcctgccagaggtgagatc
caaatacagaacctgagtgtccggtatgacagcaacctaaagccagtcctaaagcacgtc
agtgctcacatttctccagggcaaaagattggaatctgtggcagaacaggcagtgggaaa
tcctccttttctcttgcctttttcagaatggttgacacctttgaagggaggattatcatt
gatggcatagacattgcaaagctccctttacagacgctaagatccaggctgtcaatcatt
ctccaagatcctattttgttcagcggtacaatccggtttaacttggatccagaaaagaaa
tgcacagacagcatgctgtgggaagccttggaaatagcacaactcaaacatgtggtgaaa
gcactaccaggaggtttagatgccatagtcacagaaggtggagaaaattttagccagggg
caaagacagctgttctgcttagcacgggcatttgtgcggaagacaagtatcttcatcatg
gatgaagccacagcatctattgacatggcaacagagaacattcttcagaaagttgtaatg
actgcgtttgctgaccgcactgtggtaaccatagcacacagggtacacactattctgaat
gcagatttagtcattgtaatgaagagaggggttattttggagtatgataagcctgaggtt
ctgttggagcaagaagatagtgtgtttgcttcttttgtacaagccgataaataa
DBGET
integrated database retrieval system
