Trachemys scripta elegans (red-eared slider): 117877430
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Entry
117877430 CDS
T07347
Symbol
FEN1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03030
DNA replication
tst03410
Base excision repair
tst03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117877430 (FEN1)
03410 Base excision repair
117877430 (FEN1)
03450 Non-homologous end-joining
117877430 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tst03032
]
117877430 (FEN1)
03400 DNA repair and recombination proteins [BR:
tst03400
]
117877430 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117877430 (FEN1)
DNA replication proteins [BR:
tst03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
117877430 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
117877430 (FEN1)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
117877430 (FEN1)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117877430 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
XPG_I_2
RRF
Motif
Other DBs
NCBI-GeneID:
117877430
NCBI-ProteinID:
XP_034626435
LinkDB
All DBs
Position
4:complement(116146300..116149318)
Genome browser
AA seq
382 aa
AA seq
DB search
MGIHGLAKLIADVAPGAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGADMLQNEEGET
TSHLMGMFYRTIRMVENGIKPVYVFDGKPPQLKSGELAKRTERRAEAEKQLQEAQEAGEE
DNVEKFSKRLVKVTKQHNDECKKLLTLMGIPYVEAPGEAEASCATLVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASEAKKLPIQEFHLNRVLQDLDLTWEQFVDLCILLGCDYCESIRG
IGPKRAVELIKQHKTIEKIVQHIDPKKYPLPENWLHKEAQQLFLQPDVVDPEAVELKWSE
PDEDGLVLFMCGEKQFNEERIRNGIKRLSKSRQGSTQGRLDDFFKVTGSITSAKRKEPEP
KGSAKKKAKGNSAAAAKFKKGK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgggaatccacggcctggccaagctgatcgcagacgtggcgcccggtgccatccgagag
aatgacatcaagagttatttcggccggaaggtggcgattgacgcctccatgagcatctac
cagttcctgattgccgtgcggcagggagctgacatgctgcagaatgaggaaggtgagacc
accagccacctgatgggcatgttctaccgaaccattcgtatggtggagaatggtatcaaa
ccggtctatgtctttgatggcaagcccccccagctgaagtcgggcgagctggccaagcgg
actgagcgccgggccgaggcagagaagcagctccaggaggcccaagaggcaggggaagag
gacaatgtggagaaattcagcaagaggctagtcaaggtgacgaagcagcacaatgacgag
tgcaagaagctgctgaccctgatgggcattccctatgtggaggcgccaggtgaggctgaa
gccagctgtgccaccttagtgaaagctggcaaagtctatgcagctgccactgaggacatg
gactgcctgacctttggcagccccgtgctgatgcggcaccttacggccagtgaggccaag
aagctccctatccaggagttccacctgaaccgtgtcctgcaggacctggacctaacatgg
gagcagtttgtggacctgtgcatccttctgggctgtgactactgtgagagcatacgtggc
attgggcccaagcgtgctgtggagctcatcaagcagcataagaccattgaaaagattgtg
cagcacatagatcccaagaagtaccccctgcctgagaactggctgcacaaggaggcccag
cagctcttcctgcagcctgacgtggtggaccctgaggctgtggagctgaagtggagcgag
ccagatgaggatgggctcgtcctttttatgtgtggggagaagcagttcaacgaagaacgg
atccgcaatggaatcaagaggctgagcaagagccgccaaggcagcactcagggccgtctg
gatgacttcttcaaggtgactggctccatcacctcagccaagcgtaaggagccagaaccc
aagggctcagccaagaagaaagcaaaaggcaatagtgcagcagcagcaaagttcaaaaag
gggaaataa
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integrated database retrieval system
