Trachemys scripta elegans (red-eared slider): 117877576
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Entry
117877576 CDS
T07347
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
KO
K15184
AF4/FMR2 family member 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117877576 (AFF1)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
117877576 (AFF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
BRD4_CDT
Motif
Other DBs
NCBI-GeneID:
117877576
NCBI-ProteinID:
XP_034626593
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All DBs
Position
5:complement(23497601..23668427)
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AA seq
1224 aa
AA seq
DB search
MCQEVPQLFPVLVLESLYNEDRNLLRIRERERRNQEALQERETYPENAPLFAEPYKTNKE
DELSSRIQNMLGNYEEVKELISTKSHQNLIGIPKSIVPLIHQGKPDRPFFPEKTSSTLPT
SFQHSTRHQAMGPPGLAPPSASNSIRYPKTQARMEPAASLHTKSHSLSSGQSQGPEQRRS
GQESHRGGRHKKNDRRVDENGAAELQATLSELSPLLSSLSSPLAPLSPLHSSQHIHSRSQ
NNNKSHGQTYNPMKSPQDFVAGLHDNETRDSSAINLAQPSSQTFPPALPPKNSAMQQKPT
AYVRPMDGQDQAPNESPELKPLPEEYPGQPYGKIADLKANAKAKLSKLKIPSEPIEQTFP
NEVHCVEEILKEMTHSWPPPLTAIHTPSTAEPSKFPFPIKESQLVGSVIQNQKQYDAPSK
TLPNSQQGTSMLQDDLQLSDSEDSDDDRVSEKPPPSSAPPSASQSQPESVASAHSSSAES
GSTSDSDSSSDSESESSSSDSEANEPPRTSTSEPDPPTSNKWQLDNWLTKVNQPAAPNEN
LSEVVHRHGHQESKGQGKSSSSSSHERSESNELHSKNSSKITRAPQAVHLPSKRTCQKSP
TRTEEPSRRPTVGTKKPSKVPQQEAHRGSLKVESEPGPYGVKDQSSRDKPKVKTKGRPKS
RDKKELKPMVQESLEKKKHKSSHQAIAKAFLDPKPVKDIVAGGAPEHFPLSPVAQSQKSA
TPTRTSGKKPAIVVREDFHRDKLLLPIRDKTLLSPLRDFPIPHALVVKIELCLLSRIPQP
PGKGSRQKKLEGKELPSARKQDLEKKSTETPNKPLKKRKGEVEKETDKKKIKLEKETKSL
LSSSHKDSSKMKVSKFPSETLKKELLLPPPLPPMSTAQPAQKPAKMAQKRHKGESNTCSQ
LPATNNRTAKSKSNHKDSSSSKHRKVEGKHSEHSKSNKVGGPSGDVKNPFPVPSLPNGTS
KPRRPQIKFEKQHPMEYHIEEAKRLKHKADTMTDKVAKAFQYLEAALSFIEYGIAMESDA
LTPKSAYTIFTDTIDLLKFIMTLKSFSDTSASAHEKIFAVLCMRCQSILHMAMFRYKKDT
AVKYSRTLNEHFKNSSRVTQAPSPCVARSTGTPSPLSPMPSPASSVSSQPGSNASNCGSG
AIGSSINTLHNIPSITFSYVNITSYILYAYDIWEQADALARKNKEFFAELSTAVCTLALN
SSMTELVHYTRQGLQWLRLETNTP
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgtgccaagaggtgccacaattatttcctgttctagttcttgagagcttatacaatgag
gatagaaatttgctccggatcagagagagagagagacggaatcaggaagctcttcaggag
agagagacatacccggaaaatgcccccctctttgcagaaccttacaagactaacaaagaa
gatgaattgtccagccgaattcagaacatgctgggtaattatgaagaggtgaaggagcta
atcagcaccaagtcccatcagaatctcatagggataccgaagagcattgttcctctgatc
catcagggaaagcctgatcgcccgttctttcctgaaaagaccagcagtacattaccaacc
tcattccagcacagcacccgccaccaggccatgggaccccccggtttggctcccccctct
gctagtaactccatccgctacccaaagacacaagcaagaatggaaccagctgcaagtttg
cacaccaaaagccacagcttgtccagtggtcagagccaaggtccagaacagagacgcagt
ggtcaggaaagccatcgtggtggtcgccacaagaaaaatgatagacgtgttgatgaaaat
ggtgctgctgaactgcaagccaccctctcagagctttctcccttactgtcctctttgtct
tctccactggcacccctgtcacctctacattccagtcagcatatccattccaggtcacag
aacaacaacaaaagtcatgggcagacttacaatccaatgaaatcgcctcaggacttcgtg
gcaggattgcatgataatgaaactcgggacagttcagccattaatctggcccaaccatct
tctcagacatttcctccagccttgccgcccaaaaacagtgcaatgcagcagaaacctact
gcgtatgtcagaccaatggatggccaagatcaggcgccaaatgagtcaccggagctcaag
ccacttccggaggaataccctggacaaccctatgggaaaatagcagatttaaaagcaaat
gccaaggccaaactatccaaattgaaaataccttctgagcccattgagcaaaccttcccc
aatgaagtccattgcgttgaagaaattttgaaggaaatgacccactcatggccacctccc
ttgacagctatccatacgcctagcacagctgagccttcaaaatttccttttccaataaag
gaatcccagcttgttggatctgtaatacagaatcagaagcagtatgatgcaccttcaaaa
acattgcctaattcacagcaaggaacatcaatgctacaagatgacctccagctcagtgat
agtgaagacagtgatgatgatcgggtctctgaaaagccacctccctcatctgctcctcca
agtgcctcacaatcgcagcctgagagtgtggcatcagcacattccagcagtgcggagtca
gggagcaccagtgactcagacagctcctcagattccgagagtgagagcagttcgagtgac
agcgaagcaaacgagccaccgagaacttctacgtctgagcctgacccaccaacatcaaat
aaatggcagctggacaactggctaaccaaggtgaaccaaccagcagcaccaaatgagaat
ctcagtgaggttgtccatagacatggtcatcaggagagcaaggggcaagggaaaagcagc
agcagcagctctcatgaacgttctgaatcaaatgagttgcactccaaaaactcaagcaaa
ataaccagggctccccaggcggtacatcttcccagcaaacggacctgccagaagtctccc
acgcgcactgaggagccctctcggaggcccactgttggtaccaagaagcccagcaaggtc
ccacaacaagaggctcacaggggaagcctgaaagtggaaagtgagcctggtccatatggg
gttaaagaccagtcttccagagacaagccaaaagtaaaaacgaaagggaggccaaaatcc
agagataaaaaagaattgaaaccaatggtgcaagagtccttggaaaagaaaaagcacaag
agctcacaccaagccattgctaaagcatttttggaccctaagcctgtgaaagacattgtg
gctggcggtgccccagaacatttccccctcagccctgtagcgcaaagccagaagtccgcc
acccccaccaggactagtggcaaaaagcccgctattgtggtcagagaggacttccataga
gacaaacttctcttgcctatcagggataagacgttgttatcacccctgagggatttcccc
atccctcatgctcttgtggttaaaattgagctgtgtctcctttcaagaattccacagcca
cctgggaaagggagtcgccagaagaaacttgagggtaaagagctcccaagtgcgaggaag
caggatttggaaaagaaaagcacagaaactcctaacaagcctctcaaaaagaggaaggga
gaagtggaaaaagagactgataagaagaaaatcaagttggagaaagaaaccaaatcattg
ttgtcttcaagtcacaaagactccagtaaaatgaaagtatccaaatttccatccgagaca
ctgaagaaagagctcctgctaccaccaccattgccaccaatgtctactgcgcagcctgcc
cagaagccagccaagatggcacaaaagagacacaagggcgagagcaacacctgcagccag
ctgcctgccacaaataaccgaactgccaagagcaagagcaaccacaaggattcttcatcc
tccaagcacaggaaagtggaggggaagcattctgaacattctaaaagcaacaaagtaggt
ggaccttcaggagatgtcaaaaaccctttcccggtgccttctttgccaaatggtacctcc
aagccaaggagacctcaaatcaagtttgaaaaacaacatccgatggagtatcacatagag
gaggccaaaagactgaagcacaaagctgacacaatgacagacaaggttgcaaaggcattt
cagtacttggaggctgcgctttccttcatcgagtatggaattgctatggaatctgatgca
ctgacaccaaaatcagcatacaccatattcacagacaccatagatctccttaaatttata
atgacattaaaatccttttcagatacctcggcatctgcacatgaaaaaatctttgctgtt
ttgtgcatgcgctgccagtccattctgcacatggcaatgtttcgttacaaaaaagacact
gcagtaaagtattcccgaaccctcaatgaacacttcaagaattcttccagagtcacgcaa
gcaccttctccatgtgttgcaagaagcacaggcacaccttctcctctttccccgatgccc
tctcctgccagctctgtgagttcccagccaggatcaaatgctagcaactgtggcagtgga
gccattggttcttcaatcaacaccctacataatatcccaagcataaccttttcctacgtc
aacatcacttcctatatcctctatgcctacgatatttgggagcaggccgatgcactggcc
aggaagaataaggaattctttgccgaactcagtacagcggtgtgcactctggcactgaac
agtagtatgactgaactggtacactacactaggcagggtttacagtggctgagactggaa
acaaatacgccttaa
DBGET
integrated database retrieval system
