Trachemys scripta elegans (red-eared slider): 117877588
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Entry
117877588 CDS
T07347
Symbol
SEC31A
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117877588 (SEC31A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117877588 (SEC31A)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tst02044
]
117877588 (SEC31A)
Membrane trafficking [BR:
tst04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117877588 (SEC31A)
Secretion system [BR:
tst02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
117877588 (SEC31A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
TPR_Sec16
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_HPS5
Prp18
SRA1
Motif
Other DBs
NCBI-GeneID:
117877588
NCBI-ProteinID:
XP_034626636
LinkDB
All DBs
Position
5:complement(16274851..16339263)
Genome browser
AA seq
1339 aa
AA seq
DB search
MRTPRNHLFLEQFQRRIVQPCPFLLKGLKSRQDLSTQQRSSAQWSTHLLGLESDSQLNLT
QVWEKHFWDGRMKLKEIDRTAMQAWSPAQQHPIYLATGTSAQQLDATFSTNASLEIFELD
LSDPSLDMKSCATFSSSHRYHKLIWGPHTMASDGSLSGVLIAGGENGNIILYDPSKIMAG
ESEVIIAQKDKHTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATPMTPGAKTQPPE
DISCIAWNRQVQHILASASPSGRATVWDLRKNEPIIKVSDHSNRMHCSDLAWHPDVATQM
VLASEDDRLPVIQMWDLRFASSPLRVLENHTRGILTIAWSMADSELLLSCGKDAKILCSN
PNTGEVLYELPTNTQWCFDVQWCPRNPAILSAASFDGRISIYSIMGGSTDGLRQKQVDKL
SSSFGNLDPFGMGQPLPPLQLPQQTTPQSTVLPLKKPPKWVRRPVGASFSFGGKLVTFEN
IKSHQQGPEQQQHHHVYVSQVVTEKEFLNRSDQLQEAVQSEGFINYCQKKIEAAQTDFEK
NVWSFLKVNFEEDSRGKYLELLGYRKDDLGQKITSALNKESLVDGKPEEALKESDQSVQS
DDEDSQATEEPFLGERTKEETEDLTSGKETFNISVSGDVDGLITQALLTGNFESAVDLCL
HDNRMADAIILAIAGGQELLSRTQKKYFAKVQSKITRLITAVVTKNWKEIVQSCDLQNWR
EALAAVLTYARPDEFAALCDLLGTRLENEGDNLLQTQACLCYICAGNVEKLVACWTRAQD
GNSPLSLQDLIEKVVILRKAVQFTRSMDADAVGALLAEKMSQYANLLAAQGSIATALAFL
PADTNQPKIMLLRDRLCRAQGELPVGQETPKSPYEREPMPKGRAGSVAGQMQMPQGPAQQ
YYQQVRIAPTVTTWSNKTPTALPSHPPAASPSDTQGDNPPPPGFIMPPGAAHPNVSPHQA
ASPGYTVYPQAGARQPYPQTYQPTQQYSYGTGGPALYQPQQPIAPPASNSYANPPYMPPA
SPHSAPSQLYPGQPQPSPTSLNPGSSFPAPPSGASFQHGRQGAPATSVAYALSTGPTGTL
PATNELPASQRTENQSSQDKASTLEGPQNGWNDPPALNRMTKKKKIPDNFMPPVPITSPI
MNPLPDPQSQLQQPPTSLPPAAQATFQPSHLPSGQPILQNPFQPIQQPLGQSVMPPAISK
TSTEGAPGAPIGNTIQHVQSLPAEKITKKPIPDEHLILKTTFEALIQRCLSSATDPQTKR
KLDDANKRLEFLYDKLREQTLSPAIINGLHSIAKSIETRNYTEGLNIHTHIVSTSNFSET
SAFMPVLKVVLTQANKLGV
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgaggacacccagaaatcatcttttccttgagcagtttcagagaaggattgtgcaacct
tgcccgtttttacttaagggtttgaagtccagacaggatctttccacacaacagcgttct
tcagcccagtggagcacacacctgcttggcttagagtcagactcccaactaaacctcact
caagtttgggaaaaacatttctgggacggcaggatgaagttaaaggagattgatcgtact
gctatgcaggcctggagccctgcccaacaacatcccatttacctggctacaggtacatct
gctcaacagttggatgcaactttcagtaccaatgcttctctggaaatatttgaattggac
ttgtctgatccttcgttggatatgaaatcctgtgcaactttctcctcctcgcacaggtac
cataaattgatatggggacctcatacaatggcttcagatggtagtctttctggagttcta
attgcaggcggtgaaaatggaaatattattctgtatgatccatctaaaattatggctgga
gagagtgaagttataattgcacagaaagacaagcacactgggccagtaagagctttggac
gtgaatattttccagacaaaccttgtagcatcaggtgctaatgagtctgaaatctatatc
tgggacttgaacaactttgccacaccaatgacaccaggagctaagacccagcctccagaa
gacatcagctgcattgcatggaacaggcaagtccagcacatcttggcctctgccagtcct
agtggtcgtgctactgtgtgggatctgaggaagaatgagcctatcatcaaagtcagcgac
cacagcaaccggatgcactgttcagacttggcttggcaccctgatgtggctacacagatg
gtcctggcttccgaagatgacaggttgcctgtaattcagatgtgggatcttaggtttgct
tcttctcctcttcgtgttttggaaaaccatacaaggggtattttgaccattgcttggagt
atggcagattctgagctgttactaagctgtggaaaggatgctaagattctctgctctaac
cctaatacaggggaggtgttgtatgagcttcccacaaatacccaatggtgctttgacgtt
cagtggtgtcccagaaaccctgctatcctttcagctgcttcttttgatggacggatcagc
atttactccatcatgggagggagcacagatggtttgaggcagaaacaggtagacaagctt
tcatcctcctttgggaatcttgatccatttggcatggggcagcccctccctccgttgcag
cttccacagcagacaactcctcagagcactgttctaccgttaaagaagccacccaaatgg
gtccgacggcctgtgggtgcatcattttcatttggagggaagctcgttacatttgagaat
ataaagtctcatcaacaaggacccgagcagcagcagcaccaccacgtgtatgtgagtcaa
gttgtcacggagaaagagtttctgaaccgctcggatcagctgcaagaagctgtgcaatcc
gaaggcttcatcaactactgtcagaaaaaaatagaagctgcccagactgattttgagaaa
aatgtgtggtctttcttaaaggtgaattttgaagaagattctcgtggcaaataccttgaa
cttttggggtacaggaaggatgacctagggcaaaagattacttcagctctgaataaagag
agtcttgtagatggcaaaccagaggaggctcttaaagaatcggaccaatcagtacaaagt
gatgatgaagatagccaagctactgaagagccgttcttgggagagagaacaaaagaggag
actgaagatctgacatctggaaaagaaacgtttaacatctctgtcagtggagatgttgat
ggtttgattacccaggctttgctgactggtaacttcgaaagtgcagttgatctctgctta
catgataatcgcatggctgatgccatcatattggccatagcaggtggacaagagctgctg
tcaaggactcagaaaaagtactttgctaaggtgcaaagcaaaattaccaggctcattact
gccgttgtgacaaagaactggaaggagatcgttcagtcatgtgatttgcaaaactggaga
gaggcgctggctgctgtgttgacttatgctaggccagatgaatttgcagctctctgtgat
ctgttgggcactagacttgaaaacgaaggggacaatctcctgcagacacaggcttgtctg
tgttatatttgtgctgggaatgtagagaaactagttgcgtgttggactagagctcaggat
ggaaacagccccttgtcccttcaggacctcattgagaaagtagtaatcctgcgtaaggct
gtgcagtttacacgatctatggacgctgatgctgtcggggctcttctggctgagaagatg
agtcagtatgccaatctgttggctgcacagggcagcattgctactgcattggctttcctt
ccggcagacaccaaccagccaaagatcatgctgttgcgggacagactttgcagagcccag
ggagaacttccagtgggacaggagacaccaaagtccccgtatgagagagagcccatgccc
aagggacgagctggatctgtggctggacaaatgcagatgccccaaggcccagcccagcag
tattatcagcaggttagaattgcccctactgtcactacctggagtaacaaaactcctact
gcccttcccagccatcctcctgcagcctctccctctgacacacagggagacaatcctcca
cccccaggttttattatgccacccggggctgctcatccgaatgtgtcgccacatcaggcc
gcctctcccggctacactgtgtacccgcaggcgggggcacgacagccgtacccgcagact
tatcagccaacacagcagtattcttatggaacggggggaccagcactctatcagcctcaa
caacctattgctcctcctgcttcaaactcctacgctaaccctccctatatgcctcctgct
tctccccattccgcgccctctcagttatatccaggacaacctcaaccctctccaacaagc
ttgaatcctggctcttctttccccgcccctccttctggtgcatccttccagcatggcaga
caaggagctccagcaacttctgtggcttatgcactgtctactggaccaacaggtactctg
cctgcaaccaatgagcttcctgcatcccaaagaacagaaaatcagtcttctcaagacaag
gcctctaccctggaaggacctcaaaatggttggaacgatcctcctgcattgaacagaatg
acaaagaagaagaagatacctgataacttcatgcctcctgttcccatcacatccccaata
atgaatcctctgccggatccacaatcccagctgcaacagccgccaacttcactgccacct
gcagcccaggctacgtttcagccctcgcatcttccatcagggcagcccattttacaaaat
cctttccagcctattcagcagcctctggggcaatcggtcatgcctccggctatctcaaaa
actagtacagagggggcaccaggagctccaattggcaataccatacagcatgtgcagtcg
ttgccagcggagaagattacaaagaagcctattcctgatgagcaccttattctgaagacc
acatttgaagctctcatccagagatgcctgtcatctgccacagatccacaaacgaagagg
aaattagatgatgccaacaaacgcctggagtttctgtatgacaaacttagggaacagaca
ctctccccagcaatcatcaacggcttgcacagcattgcaaagagcatcgaaacgcgcaac
tacacagagggactgaacatccacacccacatagtcagcaccagcaacttcagcgagacg
tctgccttcatgccagtgctgaaagtcgtcctcacccaagccaataagctgggggtctga
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integrated database retrieval system
