Trachemys scripta elegans (red-eared slider): 117877612
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Entry
117877612 CDS
T07347
Symbol
RAB11FIP5
Name
(RefSeq) rab11 family-interacting protein 5 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117877612 (RAB11FIP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117877612 (RAB11FIP5)
Membrane trafficking [BR:
tst04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117877612 (RAB11FIP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Alk_phosphatase
Motif
Other DBs
NCBI-GeneID:
117877612
NCBI-ProteinID:
XP_034626722
LinkDB
All DBs
Position
5:135058978..135171268
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AA seq
1576 aa
AA seq
DB search
MSLLRVAEQEPPLQRWLPTHVQVTVLQARGLRTKAGGGGGKPGTSDAYTIIQLGREKYST
SVAEKSSGSPEWKEECAFELPPGALELEEPADWGGGSPRGQGGCELVLTVMHRALIGLDK
FLGQATVPLQPVFRESRSMKSQWHKLHSKAGKKEKERGEIQVTIQFTRNNLTASMFDLSM
KDKPRSPFGKLKDKMKGKKKYDLESASAIISSSTGALDMEEDYELGRKKSKGKGGFFKNK
LRKSSLTQSNTSLGSDSTTSSASGSLANNFGITINVPEVTKSPSRHSSLSTEHSVKDYLP
SPKLTHKRAFSDEISQVNVVAEPKAIQSLKPKNDPVSRSSLCVNGSHVYSDEPAPKSPMS
GLPSSLPLSLPLQNIARKSEEGFHAGFPPPDSEDLPWGASSFEKGQQKEEPRFLPSPPSL
AVQEENKVSTKAVTLSNHLGRAKLEEGSRLEIKPVQIATPLVFSMEVTKDKPLEETRKED
KKSKISLFHHGGTKSDAGNKSLGEKLGSSLTVSPQVTAAGDEKSKSSSWFGSKDTKEPSQ
KPSFHSGSQATKEVVGHLYSSEDYSPSASIGLNKPQQESSTQSAGAPIPEATPTPQGLRP
PREQTPVAPPVCDWDDTFDAFATSRLKPEIREESLLASVVMEGLAYVDDPSPTESPAELA
QENKTEIAKTEPQAADEVSLGPGSWEDVTLLKGMEENLLKTAQEATLREDGVLSHLPLSS
LLESEKTSTSPPWSAWSAVGASGKEEDVAALTTQNSARAKWAPETVHVLKPTVAYNEEEP
SSAGEDEWTTTGTETIGGLSESDRTVAEKEHEVEESRFRPCPPSDDGIFEEESSPVSAPG
LLTKSNLVLEKPSEALPGNNAVPTSLVSKVEAAEKPPAVVDVSDGQNSSNTEGMIDIKPL
GGGLQICAQLEADEASMKLGSDFHERHVPSAVWTETPEREEENSEAAGLEMTMGAPPPKP
RRWFTPGDFREEGDEANLETQRSQQDNESQRENEEGPEVEIHPQYTHVSRENGSPVAVSP
PALGAAIIEAKARSVPSVAGDADSATEDWVANLKAKANEFAERDASSGENLLEINEETGA
EQFETCPSKFSLDRLGLSDAEDDANKLETVKPGFPPQSQELTERRSGAGWGLSETAPAFP
ERNEILPEQLIPSKPDTPRDPESSRSLPFCMAVEEQWPATHYPSPSPASQLERSDLQEHP
SRPRRKSGQGANQGHPSKTPAQPAEREPQAPEALVSPTRASEQGSDSADRPEPLSSQRFS
WSADRVIDFKKADFWRPVSGEEGREQDDISTLGNPFSPRVSPSSPNNPFVEKPPDVLPIR
ATSPERPGQGGLNFKDLHEEAAPHGFQPAKLPGNQLVELPLLHGNQPLAFSTPSLVAATN
PQQFNFPSPIVCPTTGGVPAVTSRAAAQSSCPLLQTGGMKVSTLTVLPKETQPAEKPSFH
QTSSPHPVKPISAAVAEVSGEKKQHRSTLTTALSSGLEKLKTVTTSSVQPVTPSSQLEKV
ESKKLKDAALPDQSAKYYHLTHDELIQLLLQREKELSRKEEHIHELENYIDQLLVRIMER
SPTLLQIPLEKNTTSK
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgctgcgggtggcggagcaggagccgcccctgcagcgctggctgcccacccac
gtccaggtgaccgtgctgcaggcccggggcttgcggaccaaggcagggggcggcgggggg
aagccgggcaccagcgacgcctacaccatcatccagctgggccgggagaagtacagcacc
tcggtggcggagaagagctccggcagcccggagtggaaggaggaatgcgccttcgagctg
cccccgggggccctggagctggaggagccggcggactggggagggggctccccccggggc
caggggggctgcgagctggtgctcaccgtcatgcaccgggcgctcatcggcctggacaag
ttcctgggccaagccaccgtgcccctgcagccggtcttcagggagagccgctccatgaag
agccagtggcacaagctacattccaaggctgggaaaaaggagaaggagcgaggagagatc
caggtcaccatccagtttacccgcaacaacctgacggccagcatgttcgacctttccatg
aaggacaagccccggtcgcccttcggcaagctgaaggacaaaatgaaggggaagaagaaa
tacgacttggaatctgcctctgctatcatctccagcagcacaggggccctcgacatggag
gaggactacgagctagggcgcaagaaatccaaaggcaagggcggtttcttcaagaacaag
cttcgcaagtcctccctgacccagtccaacacctcgctgggctccgacagcaccacctcc
tcagccagcggtagcctggctaacaactttggcataaccatcaacgttcccgaggtaacc
aaatccccgagcagacacagcagtctgtccacagagcactctgtgaaagactatctgcct
tcgccaaaattaacccacaagagagcattcagtgatgagatctcccaggttaacgtggta
gcggagccgaaagcaatccaaagcctgaagccaaagaatgaccctgtctccagatcctct
ctctgtgtcaatggaagccatgtttacagtgatgaacctgcaccaaagagcccgatgtct
ggcctaccgagctccttgccgctgtccctgcctctacagaatatcgccagaaagtctgag
gagggtttccatgctggcttccctcctcctgactctgaagacctgccatggggagccagc
agctttgagaaggggcagcagaaagaagagcccagattccttccctctcctcccagctta
gcagtacaagaggagaacaaggtctcaaccaaagcggtaaccctcagcaaccacctaggc
agagccaagttggaagaaggcagccgcttagagatcaaacccgtgcagatcgcaacaccg
ctggtcttctccatggaggtgacgaaagacaaaccccttgaggaaaccagaaaggaagac
aagaagtccaagatcagcctcttccatcacggggggaccaaaagtgatgcagggaacaag
agcttgggagagaagctggggtcatccctgaccgtatctccacaagtaacagctgctgga
gacgagaagagtaagagcagcagctggtttggatccaaggacaccaaagaaccttctcag
aaacccagtttccactctgggtcgcaagctaccaaagaggtcgttgggcacctttattcc
tctgaggattacagtccctctgcctccataggacttaacaaaccacagcaggagtcttca
acccaaagcgctggcgcccctattccagaagccactcccacaccccaaggactccgccct
cctcgagaacagactcctgttgctcctcccgtctgtgactgggatgacacctttgatgcc
tttgcaacgagtagactcaaaccagaaattcgggaggaaagccttttggcttctgtagtt
atggagggcctggcctacgtcgatgatccgagtccaacagaaagcccagctgaactggct
caggaaaacaagactgagatagctaagactgagccacaagctgctgatgaagtgtctcta
ggccccgggtcctgggaagatgtaacgctcttaaaaggaatggaggaaaacttactgaag
acagcgcaggaagctacgctgagagaagatggtgtgttgagtcatttgcctttaagctct
ctgttggagagtgagaaaactagcacctctccaccttggtcagcctggtctgcagtggga
gcttcggggaaggaggaggatgtagcagcattgactactcaaaatagtgccagagcgaaa
tgggccccagaaacggtgcacgtattaaaaccgactgtagcatacaatgaggaggagccc
agtagtgcaggggaagatgaatggacgaccacaggcacagaaacaattggcggtctatcg
gaaagcgaccgaaccgtcgccgagaaggaacacgaggttgaagagagcaggttcaggcca
tgtccaccttccgatgacggcatcttcgaagaggaaagcagccctgtgagtgccccaggc
ttattgaccaaaagcaatttagtcttggagaaacccagtgaggcacttcctgggaataac
gctgtcccaacatcgttggtgtcaaaagtggaggcagcggagaagccgccagctgtagtc
gacgtcagtgatggtcagaattctagtaacacagaggggatgattgatataaagccactc
ggaggtgggcttcagatatgtgcacaactggaggcagatgaagccagcatgaaactaggt
tctgactttcacgagagacatgttccctccgctgtatggactgagaccccagagagagag
gaggagaacagcgaggcagctggtttggagatgaccatgggggcaccgccgccaaagcct
cggagatggttcacacctggggatttcagagaggaaggtgatgaggccaatttggagacg
cagaggagccagcaagacaacgaatctcagcgtgaaaatgaggagggcccagaggtggaa
attcacccgcaatatacccatgtaagccgagagaacggttccccagtggctgtcagccca
cctgcgttgggagcagcgataattgaagcaaaagcgagatctgtcccttcggtcgctgga
gatgctgattccgccacagaggactgggtggctaatttgaaggcaaaagctaatgagttc
gcagaacgggacgcctcttctggggaaaacctgctagagataaatgaggagactggagct
gagcagttcgagacttgcccttcgaaattctcactagacagattaggcctgtcagatgct
gaagacgacgcaaacaaattggaaacggtaaagccaggcttccctccccagtcacaagag
ctcaccgagcgacgctccggcgccgggtggggcttgtcggagactgcaccggcgttccca
gagaggaacgagatactccctgagcagctgattccttcaaagcccgatactcccagagat
ccggaatccagccgatcgctgccgttctgcatggctgtggaggagcagtggccagctacg
cactacccgagccccagcccagctagccagcttgaaaggtcagatctgcaagagcatccc
tcgcggccaaggcgtaaatcggggcagggagctaaccagggccatcctagcaaaacacca
gcccagcccgctgaacgggagcctcaagccccagaagcgttagtgagcccgaccagggcg
tcggagcagggtagcgattcagccgacaggcccgagccattgtcgagtcagcggtttagc
tggtcagcagatcgagtgatagacttcaaaaaggctgacttctggaggccagtgagcggg
gaggagggcagagagcaggatgacatttcaaccctgggcaaccctttcagcccccgagtc
agcccctcttccccaaacaatccctttgtggaaaagccaccagacgtgctcccgattcgg
gccacgtcacccgaaaggcctggtcagggaggcttaaacttcaaagaccttcatgaggaa
gctgctccacatggcttccagcctgctaagctcccagggaaccagctagttgaacttcct
ctcttgcatggcaaccaacccttggccttctccacaccttcccttgtggctgcaactaac
ccccagcagttcaatttcccttcccccatcgtgtgccctacaacgggtggggtgcctgcg
gtgaccagccgggcagcagcccagtcctcctgccctttgctgcagaccggtggcatgaaa
gtctcaacgctcacggttttgcccaaggagacacagccggctgagaagccctctttccat
cagacaagcagtcctcatccagtgaagcccataagtgctgccgtggcagaggtctccggg
gagaagaagcagcacaggtccaccctgaccactgccctgagcagtggcctggaaaagctg
aagaccgtcaccacgagtagtgtccagccagtgaccccttcatcgcagctggagaaagtg
gagtccaagaagctaaaggatgctgctctgccggaccagtctgccaagtattatcacctg
acccacgatgaactcatccaactgctgctgcagagagagaaggagctgagccggaaggag
gagcacatccatgaactggagaactacattgaccagctgctggtgcgcatcatggaacgg
tctcccaccctccttcagatccccctggaaaaaaacacgaccagcaagtaa
DBGET
integrated database retrieval system
