Trachemys scripta elegans (red-eared slider): 117877618
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Entry
117877618 CDS
T07347
Symbol
TLR3
Name
(RefSeq) toll-like receptor 3
KO
K05401
toll-like receptor 3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04217
Necroptosis
tst04620
Toll-like receptor signaling pathway
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117877618 (TLR3)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117877618 (TLR3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117877618 (TLR3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tst04054
]
117877618 (TLR3)
04090 CD molecules [BR:
tst04090
]
117877618 (TLR3)
Pattern recognition receptors [BR:
tst04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117877618 (TLR3)
CD molecules [BR:
tst04090
]
Proteins
117877618 (TLR3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Tlr3_TMD
TIR
LRR_9
TIR_2
LRRNT
DHU1_N
Motif
Other DBs
NCBI-GeneID:
117877618
NCBI-ProteinID:
XP_034626748
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All DBs
Position
5:80138520..80163207
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AA seq
896 aa
AA seq
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MRDSHPSWTCLSYSLLTFSLLCVTAENQCKIGNQVADCSHLKLKQIPSDLPINITALDIS
HNQLNKLPPANLTKYSQLIYLDAGSNSLSKLQPELCQTLPLLKVLKLQHNQLHELTDNVF
ASCSSLTELNLGYNIIKIKSNPFKNLKNLNKLDVSHNRLLSTKLGSQQQLESLRELVLSE
NKITELKKEELDFLSKTSLNRLDLSSNPLKEFHTGCLHAIGNLYGLVLNNVELGENHTEK
LCLELSGTRIQNLSLSQVQLSYIYKSTFHGLQTTNITALNLSKNYLNMIDNDSFTWLSNL
ENLNLEDNRIYHLSSHSLYGLSNVKYLNLRRSHVRKIDDFSFRWLSHLEYLLIDSNNFQA
ITPNMFTGLDNLKYLSLCNWTNGLQIITNKTFSSLANSTLQFLNLTKSRITKIESGAFSW
LGHLKILDLGLNEINQMLTGHEFKGLQNIEDIYLSYNKQLTLTSESFAFVPSLRKLMLRK
VACSNLDLSPSPFHPLRNLTILDISNNNLANVKDDLFDGLHKLEILDLQHNNLARLWKHA
NPGGPVLFLKDLLNLHILNLKSNGLDEIPVQVFKGLFQLRSLDLGSNNLNLLPASLFDDQ
ISLNSLILQKNLITSVEEKVFGTAFKNLKELEMDSNPFDCTCESISWFVSWLNVTQTNIP
GLDTHYLCNTPPKYHSNLVMHFDISPCKDSAPFKLLYIISTTVIMLLLFIVILIHFEGWR
IAFYWNVSVNRVLGFTEIDRQQEEFDYDAYIIHARRDRNWVSKNFIPLEENDQSQIRFCL
EERDFEAGISEFEATINSIKKSRKIIFVVTEHLLKDPWCKKFKVYHAVQQAVEQSRDSII
LIFLHDIPDYKLNHALCLRRGMFKSRCILDWPAQKERVSAFHQQLKMALKSSSNMH
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgagagattcccatcccagttggacctgcttgtcttacagcctgttgaccttttccttg
ctttgtgtaacagctgagaaccaatgtaagatcggaaatcaagtggctgattgcagtcat
ctaaagctgaaacaaattccttcagatctcccaattaatataacagcgttggacatttct
cataaccagctaaacaagctaccacctgcaaatttaacaaagtacagccagcttatttac
ttggatgcaggatccaactccctctctaaacttcagccagaactgtgccaaactttgccc
ctgttgaaagttttgaagctgcaacataatcagttgcatgagctcactgacaatgttttt
gcttcctgttccagcctgacagagctcaatttagggtacaacataataaagatcaaaagc
aatcctttcaaaaacctgaagaatttgaacaaactggatgtatctcataatcgtttgctt
tctacaaaattaggatctcagcaacagttggagagccttcgtgagctcgtgctatcagag
aataaaatcactgagttaaaaaaggaagaactagattttcttagcaagacttccttaaat
aggcttgacttatcatcaaacccactgaaagagtttcacacaggttgtttacatgcaatt
ggaaatctgtatggccttgtgctgaacaacgttgagcttggcgaaaatcacacagagaaa
ctttgcttggaattgtcaggcacaagaattcagaatctgtcactgagccaggtccagctt
tcttatatttacaagtcaaccttccacggactgcaaacaacaaacatcacagctttaaac
ctttccaaaaattatttgaacatgatagacaatgactcttttacctggctttcaaactta
gagaatttaaacctagaggataataggatttatcacttatcttctcattcattgtatgga
ttgtccaatgtcaaatatttgaatctgagacggtcacatgtcagaaaaattgatgatttc
tcctttcgttggctaagccatttagagtatcttcttatagatagtaataattttcaagca
attactcctaatatgttcacaggcttggacaatctgaaatatttgagtctatgtaactgg
accaatggcttacaaataataactaataaaacattttcatcacttgctaattctactctg
cagtttcttaatcttacaaaaagtagaatcacaaaaatagaaagtggagcattttcttgg
ttgggacacctaaaaattcttgatttgggactcaatgaaataaaccaaatgctcacaggt
catgagtttaaaggtctgcaaaatattgaggatatctacctttcctacaacaaacagttg
actttgacaagcgaatcgtttgcttttgttccaagccttagaaaactgatgctacggaag
gtagcttgtagcaatctggacctctctccttcaccttttcaccctctacggaatctaacc
atcctggatatcagcaacaacaatctagctaatgtaaaagatgatttgtttgatggactt
cacaaacttgaaattctggatttgcaacataataatttggctcgactttggaaacatgcc
aatccgggtggccctgtcctttttttaaaagatcttcttaacctgcatatacttaatttg
aagtctaatggcttggatgagattccagtacaagttttcaagggattgtttcaattaaga
agcctggatttaggatcaaataatttgaacttgcttccagcatctttgtttgatgaccag
atatctctgaattcattgatccttcaaaaaaatcttataacatctgttgaagaaaaagtg
tttgggacagctttcaagaatctgaaagaactagagatggattccaatccatttgactgc
acctgtgaaagtatctcctggtttgttagttggcttaatgtgacccaaacaaacatacct
ggattagatacccattacctttgcaacacaccacctaaatatcatagtaatctggtgatg
cattttgacatttcaccctgcaaagatagtgccccttttaaattactgtatataataagc
accactgtgataatgctcctcctctttattgttattcttatccattttgaaggctggagg
atagcattttactggaacgtgtcagtaaatcgagtacttggttttacagaaatagacagg
caacaggaagaatttgattatgatgcctacattattcatgcaagaagggacaggaattgg
gtgtccaagaacttcattcctctggaagaaaatgatcagtctcaaattaggttttgttta
gaggaacgagactttgaagcaggcatatctgaatttgaagccactattaatagtataaaa
aaaagtcggaagattatctttgttgtcactgaacatctcttaaaagatccctggtgcaaa
aagttcaaggtgtaccatgctgtccagcaagctgttgagcaaagtcgggattccatcata
ctgatcttccttcatgacattccagattacaaactgaatcatgcactttgcttgagaaga
ggaatgttcaaatctcgctgcatcttggattggccagctcagaaagaacgggtcagtgca
tttcatcagcaattaaaaatggcacttaaatctagcagcaacatgcattga
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