KEGG   Trachemys scripta elegans (red-eared slider): 117877670
Entry
117877670         CDS       T07347                                 
Symbol
LARP1B
Name
(RefSeq) la-related protein 1B
  KO
K18757  la-related protein 1
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tst03019]
    117877670 (LARP1B)
Messenger RNA biogenesis [BR:tst03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117877670 (LARP1B)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 117877670
NCBI-ProteinID: XP_034626866
LinkDB
Position
5:43428567..43534809
AA seq 1043 aa
MSAAARVSVAPPEQQVGGGSGQTRSRELVETGQELPEPSQVLPQVDETGESSGSREADPP
GQDEKRRQVVEAPLPKENPWIRRKPIPNSPSPAAADTQLVLQDSELPNSTKVIKAGKPKT
RKPSKASDFNDTTNWPTPSEIANNECKTINHQNKKPLNKKEKEEKTEKRASSEIENPQAK
PDGPGENVSEDEAQCNNQRKKGNKQKWVPLHLDDARPDSQEGTGSRNSSRSQPETSKLVP
YNNRRNESRTWHRDREKRDDHDEVSSVRSEGGSIRGFFRGRGRGRGRGRGRGRGNPRMNY
EYSYGYQELYGERTNQPFQPELNASMMYYYDDGTGVQMYSVDETLLKEYIKRQIEYYFSI
ENLERDFFLRRKMDQQGFLPISLIASFHRVQALTTNVNLILEALKDSTEVEIVDQKMRKR
VDPEKWPIPGPPSRNQPQTDFSQLINCPEFIPGKAFGSYTESAPSSPRMGSPKKSTETSN
LQTMSKGLSTSLPDLDSEPWIEVKKRHRPSPVKLKESVHTLEHTPSQQQQAPPSQEQEQE
ELDFLFDEEMEQIEGRKNTFTDWSDNDSDYEIDDHDVNKILIVTQTPPYMRKHPGGDRTG
NHVSRAKITSELAKAINDGLYYYEQDLWMEQGENDSTAIKQEVENFKKLNLISKEEFDSL
TPEPNQEVLPWPPRSQQDLTDELACKLFGVVEVPPTTMARSLPTAVPESPRVHPARTPKT
PRTPRLQDPNKTPRFYPVVKETRSIDVKVPRKRKTRHSTNPPLECHVGWVMDSRDHRPRT
SSVSSSNASPSEGAPKAGSYGCTPHSLPKFQHPSHELLKENGFTQQVYHKYRRRCLVERK
RLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLALDDAKEHYRYGLECLFRFYSYGL
EKKFRQEIFKDFQEETKKDYESGQLYGLEKFWAYLKYSQSKTLPVDPKLQEYLCNFKRLE
DFRVDPPLSEISGRKRPSPSIGEESGCPRHQPTSSSKTLIAAETTADHQFQIPVNFHDGN
TAQESIDKLGQNSAATKSTEGDI
NT seq 3132 nt   +upstreamnt  +downstreamnt
atgtccgcagccgcccgagtgtccgtagcgcccccggagcagcaggttggcgggggctcg
ggacagactcgctcccgggagttggtggagacgggacaggagctgccggagcccagccag
gtgctgccgcaggtggatgaaaccggggagagcagcggtagccgagaggcggatccccca
gggcaggacgagaaacggcggcaggtggtggaggctcccctgcctaaggaaaacccctgg
atcaggagaaaacctatccccaacagcccgtccccggcagcagcggacacccagctcgtc
ctacaggactcagaactgccaaattccactaaagttataaaagcagggaaaccgaagacc
aggaaacccagcaaggctagtgacttcaatgataccacaaattggccaacaccaagtgaa
atagcaaacaatgaatgcaaaaccataaatcatcagaataaaaagccactaaataaaaaa
gaaaaggaggagaaaactgaaaagagagcaagcagtgaaattgagaacccgcaagcaaag
cctgatggtcctggagaaaatgtcagtgaagatgaggctcagtgtaacaatcaaaggaaa
aaaggtaacaagcagaagtgggtaccacttcatttagatgatgcaagaccagatagccaa
gaaggaacaggctctcgaaatagttcaagatctcagccagaaacgagcaaattagtgcca
tacaacaacagacgaaacgagtcaagaacttggcaccgtgatagagagaaaagagatgac
catgatgaagtttccagtgtgagaagtgaaggtggcagcattcgaggattctttagaggc
agaggaagaggacgtggcagaggaagagggcgtggcagaggaaaccctcgaatgaactat
gagtattcgtatggttaccaagaactatatggtgaaaggaccaatcagccatttcaacca
gaacttaatgctagtatgatgtattactatgacgatggaacaggagtacaaatgtattct
gtggatgaaacactgctcaaagaatacattaaacgtcaaattgagtattatttcagcata
gaaaatttggaaagagacttttttctgaggagaaagatggaccaacaaggattcttgcct
atttctttaattgccagcttccatcgtgtgcaagctctgactacaaatgttaacctaatt
ttagaggccctaaaggatagtacagaagtggaaatagtggatcagaagatgagaaaaagg
gtagacccagaaaaatggccaattcctggtccaccttcacggaatcagccacaaactgac
ttctctcagctcatcaactgcccagaatttataccaggcaaagcttttggttcatatact
gagtctgcaccaagttctccaagaatgggaagcccaaagaaaagcactgaaacaagtaac
cttcaaacaatgtctaaaggattgtctacaagcttgccagatctggactctgagccttgg
atagaagtgaaaaagaggcatcgtccatccccagtcaaactaaaggaatctgtgcataca
ctagagcacacaccaagtcagcaacagcaggccccaccttcacaggaacaagaacaagaa
gagcttgattttttgtttgatgaggagatggaacaaatagaaggtcgcaaaaatacattt
actgattggtcagacaatgattcagattatgaaattgatgaccacgatgtaaacaaaatt
ttgattgtaacacagacaccaccttatatgagaaaacatcctggtggagatcgcactggc
aaccatgtgtctcgtgcaaaaattacatcagaacttgctaaagctattaatgatggttta
tactattatgaacaggatttatggatggagcagggtgaaaatgattctacagccataaag
caagaggttgaaaacttcaagaaactaaatctcatcagtaaagaagagtttgacagtctt
acacctgagccaaaccaggaagttcttccatggcctccaaggtcacaacaagatttaaca
gatgagctagcttgcaaattgtttggtgttgtagaagtacctccaacaacaatggctcgt
tcactgccaacagcagtcccagaatctccaagagttcatcctgccagaacacccaaaaca
cctcgtaccccaaggttacaagatcccaacaaaacgccaagattctatcctgttgttaaa
gaaacaagatccattgatgtaaaggttccaagaaaaagaaaaacacgacatagtacaaac
cctccgctagaatgccatgttggttgggtaatggattccagagatcacaggccaagaaca
tcttctgtgagcagttcaaatgcttcaccttcagaaggtgctccaaaagcaggaagttat
gggtgtaccccacactcacttcccaagttccagcatccttctcatgaacttttaaaggaa
aatggctttacacaacaagtgtaccacaaatatcgtcgaaggtgcctagttgagagaaaa
cggttgggaattggccaatcccaggaaatgaacacactctttcgtttctggtcctttttt
ctcagagatcactttaacaagaaaatgtacgaggaattcagacagcttgctctagatgat
gcaaaagaacactacaggtatggattggaatgcttgtttagattttacagctatggtttg
gaaaaaaaattcagacaagagatcttcaaggattttcaagaagaaacaaaaaaagactat
gaatctggtcagctttatggattagaaaaattttgggcttatctgaaatactctcaatcc
aaaactctacccgttgaccccaaactgcaggaatacctttgtaactttaagagactggag
gacttcagagttgatcctcctcttagtgaaatatctgggagaaaaagaccttcaccttca
ataggtgaggagagtggttgtcctagacatcagcctacatcctcttctaagactctaatt
gctgctgaaaccacagctgaccatcagtttcagatcccagtaaactttcacgatgggaat
actgcgcaggaatcaattgacaagttaggccagaacagcgctgccacaaaatcaacagaa
ggtgacatctga

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