Trachemys scripta elegans (red-eared slider): 117877678
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Entry
117877678 CDS
T07347
Symbol
NUP107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117877678 (NUP107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117877678 (NUP107)
03036 Chromosome and associated proteins [BR:
tst03036
]
117877678 (NUP107)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117877678 (NUP107)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117877678 (NUP107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
HisK_sensor
Phage_int_M
Motif
Other DBs
NCBI-GeneID:
117877678
NCBI-ProteinID:
XP_034626884
LinkDB
All DBs
Position
1:63140758..63180073
Genome browser
AA seq
919 aa
AA seq
DB search
MERNEFGEMSSPQDVDVTRPARKQSSKKRVSILASLDDSLGNGISRGQIVPRTPGSLLRQ
SFTPQTRGSTKQLDMSTILGTGGKSPQFTHTPGFFGHLSMLDDSNWTAALTPQHTGMYTN
LDLSNVTEDVTMSAVLLREDDPGEAATMSMYSDFLHSFLKHTSTTVFELVEEYENTCNNQ
VNILGKIVYRATPGQQKFSKTASVLWLLKQEMVTWRLLSSLYRDRIQSALEDETMFEIAV
LNASEKTAVGILFQKDSLVRQSQLVVDWLESIAKDEIGDFSDNIEFYAKSVYWENTLHIL
KQRQFSTYIGSTRPLVTELDPDAPIRQKMPLDDLDREDDARLLKYLFTLIRAGMTDEAQR
LCKRCGQAWRAATLEGWKLYHDPNVNGGTELEPVEGNPYRCIWKISCWRMAEDEQFNRYE
RAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVMTTEELEELPREYLE
TNWTLEKVFEELQATDKKRVLEENQEHYHVIQKFIILGDVDGLMDEFNKWLSKDRSVLPG
HLLRFMTHLILFFRTVGLQTKEEVSVEILKTYIQRLVSEKHTDLIAFYVSHLPQELAVAQ
YAVFLEDVTETEQRHHCLELAKEAGLDVATITKTVVENIRKKDTGEFTHHDLALDTGTTE
EDRLKIDVIDWLVFDPAQRAEALKQSNAIMRKFLASKKHEAAKDVFVKIPQDSIAEIYNQ
WEEQGMDSPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSAPQKPILVPQASFTERV
AHEHKEKKYEMDYGIWKGLLDAVTADVKEKMYNVLLFVDGGWMVDVREDAEDDPERTHQM
ILLRKLCLPMICFLLHTVLHSTRQYQECLRLADVVASERHKLYVVFSKEELRKLLQKLRE
SSLMLLDQGLDPLGYEIQS
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaatgaatttggagagatgtcatccccacaagatgtagacgtgaccaggcct
gctcggaaacagagctctaaaaaaagagtttctattcttgcatcactggatgacagtctt
ggtaatggaatatcaagaggccagatagttccccgaactccagggtcattgcttcgccag
tcctttactccacaaacacgaggttccacaaagcagctagatatgtctaccatcctggga
acaggcgggaaatcccctcaatttacgcatactcctggattctttggccatctgtctatg
ttggatgacagcaattggacagctgcactcacacctcagcatacaggaatgtacacaaac
ctagacttgtccaatgtgacagaggatgtcaccatgagtgctgttctgttgcgtgaggat
gatcccggagaagctgctactatgagtatgtactcagattttctgcattcgtttttgaag
cacacttcaactaccgtttttgaacttgtagaagagtatgagaatacttgtaataaccag
gtgaatatactggggaaaatagtttaccgagcgactcctggacagcagaagttttcaaag
actgccagtgttctgtggcttctcaagcaagagatggtaacctggagactactgtcctca
ctttacagagatagaatacagtctgccctggaagatgaaacaatgtttgaaattgcggtt
ctaaatgctagtgaaaagacggctgtaggcatcttgtttcagaaagactcgttggttcga
caaagccagctggtggtagattggttagagagcattgccaaggatgaaattggagatttc
tctgacaacattgagttctatgcaaaatctgtatattgggagaacactctacatattttg
aagcagcgacagttcagcacatacattggaagtactcgtcccctggtaactgaactagac
ccagatgcccccataagacagaaaatgccactcgatgatttggatcgagaagatgatgcc
aggttactcaagtacctattcactcttatcagagctgggatgacggatgaggcacaacgc
ctgtgcaaacgatgtggtcaggcctggagagctgcaactcttgaagggtggaaactgtac
catgatccgaatgtaaatggaggaacagagctggaaccagtggaagggaatccatataga
tgcatttggaaaatcagttgttggcgaatggcagaagatgagcagtttaatagatatgag
agagcaatctacgcagcactcagtgggaacctcaaacagcttcttccagtttgtgatacc
tgggaagatacagtctgggcatatttccgggtcatggtggattcgctggtagagcaggaa
atccgtacatccgtaatgaccacagaggaactggaagagctccctagagagtatttagaa
acaaactggactttagaaaaggtttttgaagaactccaggctacagacaaaaagagagtt
ttagaggagaaccaagaacactatcatgtgattcagaagttcattattttgggagatgtg
gatggcttgatggatgaatttaacaaatggctttccaaagacagaagtgtgctcccaggg
cacctccttcggttcatgactcaccttattctgtttttccgcactgtgggactgcagaca
aaggaggaagtctctgttgaaatcttaaagacctacattcagcggttggtaagtgagaag
cacacagatctaatagcattttatgtcagccacttacctcaggagctagctgttgctcaa
tatgctgtatttttggaagatgtcactgaaactgagcaacgtcaccactgccttgaacta
gcaaaggaagcaggtctggatgttgcaaccataacaaaaactgttgttgaaaacattcgc
aagaaagatactggcgagttcactcaccatgaccttgcactagatacaggcacaacagag
gaagatcgcttgaagattgatgtgattgactggctggtatttgatcctgcacagcgggct
gaagcacttaagcaaagcaatgctataatgaggaagttcttggcatccaagaaacatgaa
gcagcaaaagatgtatttgtgaagattccacaagattccatagcagaaatatacaatcaa
tgggaggaacaaggaatggatagtccgcttccagctgaagatgacaatgctataagagag
catttatgtatcagagcatacctggaagcccatgaaacgttcaatgagtggtttaaacac
atgaactcagctccacagaagcctattttagtgccacaagcaagcttcactgagagagtg
gcccatgaacataaagagaagaagtatgagatggattatggtatttggaaaggtctcttg
gatgctgtaacagctgatgtgaaagagaaaatgtacaatgtcttgctatttgttgatgga
ggatggatggttgatgtcagagaggatgctgaagatgaccctgaacgaacacatcagatg
atcttgctgcgaaaactgtgcctgcctatgatttgctttctacttcatacggttttacac
agcaccagacagtaccaggaatgcctgagactcgctgatgtggtcgcttcagagcgacac
aagctctatgtggtgttttctaaggaagaactcagaaagctgctacagaagctgagggag
tcttctctaatgcttttggaccagggtcttgatcctctgggatatgaaattcaatcgtag
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integrated database retrieval system
