Trachemys scripta elegans (red-eared slider): 117877703
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Entry
117877703 CDS
T07347
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117877703 (SMARCAD1)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117877703 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
DEAD
ERCC3_RAD25_C
TcdB_N
Motif
Other DBs
NCBI-GeneID:
117877703
NCBI-ProteinID:
XP_034626951
LinkDB
All DBs
Position
5:complement(19184534..19262241)
Genome browser
AA seq
1030 aa
AA seq
DB search
MSLFNLDRFRFEKKAKKVEQENPPPSLPITEITAAPSPAAADNAAGGGGGDDEVTDDSSR
PDTPRSDVTEKTEDSSVPETPEAERTKNSSSFKNRRGIQFIDVSSDSEDQGPPNCSSTKQ
DTVPMSEVIVISEQSDDEEAEDVPPTFTYTNDADQLPDMDEEEDIRDAKLQTLKELFPQR
SDQELLQLIESTSTMDEAIAAGLKFNDEAASRKRKLSQSPTNNSEDSGDQISKKQRTNSL
EGEESQKEWEKQEALVKKLQNKFPSLDKEELKDVLQEHNWVFHEALESLKVFAEDQQDVQ
YPSKSEVSSWNEVSTNSKKHYNNDTKVKVKQKSSAKAQNGFRKKDKGKKGVWRTKRETED
SEYESASEGGSSLDEDYSSGDEVMEDGYKTKIVSFLQDASLGELTLIPQCSQKKAQKITE
HRPFNSWEALFTKMSKTNGLSEDIIWNCKILLKERDVVLKLMNKCEDISNKLTKQVTRIT
EDGGCGWNIEQPSILNQSMELKPYQKIGLNWLALLHKHGLNGILADEMGLGKTIQAIAFL
AYLYQEGDKGPHLIVVPASTLDNWIREVNLWCPALDVLFYYGSQEDRKQLRIDINNKVVN
FNVIVTTYNSAISSADDRSLFRRLKLNYAIFDEGHMLKNMGSVRYQHLMTINAKNRLLLT
GTPVQNNLLELMSLLNFVMPHMFSGSTSEIRRMFSSKTKAAEEHSIYEKERIAHAKQIIK
PFILRRVKDEVLKQLPPKKDLIELCDMSEKQEQLYYDLFNKLKKSIDSQEKNSEMGNVMM
QLRKMANHPLLHRQYYTADKLKMMSMLMLKEPTHCDANPDLIFEDMSVMTDFELHLLCKQ
YASVSDFKLEMDTILDSGKFRTLERILSDLKEKGDRVVLFSQFTMMLDILEVLLKQQQHR
YIRLDGKTQISERIHLIDEFNTDMGIFVFLLSTKAGGLGINLTSANIVILHDIDCNPYND
KQAEDRCHRVGQTREVQVIKLISKGTIEESMLKISQQKLKLEQDMTAVDLGEEGTIPADI
ATLLKTSLGL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttaatctggaccgctttcgctttgagaagaaggctaaaaaagtggaacag
gaaaatccacctccttctcttcccataactgagatcacagctgctccttctcctgctgca
gcagacaatgctgctggtggtggtggtggtgatgatgaggttacagatgacagcagcagg
ccagatactccaagatcagatgtgactgagaaaactgaagactccagtgtcccagaaacc
ccagaagcagagaggacaaagaattcatcatctttcaagaatcgaagagggatacaattc
attgatgtgtcttcagatagtgaggatcaaggaccaccaaactgttccagtacaaaacaa
gacactgttcccatgagcgaggtgattgtaatctctgaacagtctgatgatgaagaggct
gaagatgtaccacctacatttacatatacaaatgatgcagaccagttgccagacatggat
gaggaggaagacatcagagatgctaaactccaaacactgaaggaactctttccgcaaaga
agtgaccaagaattattacaattgatagaatcaaccagcacaatggatgaagcaatagct
gctggtctgaagtttaatgatgaagctgcatcccgaaaaaggaaactaagccaatcaccc
acaaacaattctgaagacagtggtgaccaaatttcaaaaaagcaaagaacgaactctcta
gaaggggaagaatctcaaaaagaatgggaaaagcaagaagctcttgtaaagaaactgcaa
aataaatttcccagtttggataaagaggaactgaaagatgtacttcaagaacataactgg
gtgtttcatgaagcactggagtctttaaaagtatttgcagaagaccaacaggatgtgcaa
tatccttccaaaagtgaagtttctagttggaacgaagtctccacaaatagcaaaaagcac
tataataatgacactaaagtgaaggtgaaacagaaatcttctgcgaaagctcagaatggc
tttaggaaaaaagataaaggcaaaaaaggtgtttggaggactaaacgagaaacagaagat
tcagaatacgagtcagcttcagaaggtggtagctcccttgatgaggactacagcagtggt
gatgaagtgatggaggatggttacaaaactaaaatagttagcttcctgcaagatgcttca
ctaggtgaactcactttgattcctcagtgttctcagaaaaaggctcagaagataacagag
caccggccctttaatagttgggaagctctgtttacgaaaatgagtaagacaaatggatta
tcagaagatattatatggaactgcaaaatattgctcaaagagagagacgtggttctaaaa
ctcatgaacaaatgtgaagacatttcaaataaattgacaaaacaagttaccaggatcaca
gaagatggaggatgtggatggaatatagagcaaccttccattctgaatcaaagtatggag
ctcaagccctatcagaagataggtttgaactggctagcgctactgcataaacatggattg
aatggtattttagctgatgaaatgggtttaggaaaaacaatacaagctatagcattcctg
gcatacctctaccaagagggtgataaaggtcctcatttgattgttgtgccagcttcaact
ttagataactggataagagaggttaatctgtggtgtcctgctcttgatgtccttttttat
tatggatcccaagaggatcgtaagcaactcagaattgacattaataataaagttgtaaat
ttcaatgtgattgtgaccacgtataactctgcaattagcagtgcagatgaccgtagcctg
tttcgccgtctgaagcttaactatgcaatctttgatgaaggtcacatgttgaagaacatg
ggttctgtacgctaccagcacctaatgacaattaacgcaaagaatcgtctgctgctaaca
ggcactccagttcaaaataacctgttggaattaatgtctctattgaattttgtcatgcca
catatgttcagtggtagcaccagtgaaatccggaggatgttctcttcaaaaacaaaagct
gctgaagaacacagtatatatgaaaaggagcggattgctcacgcgaagcagatcataaag
ccatttatcttgagaagagtaaaggatgaggtccttaaacaactaccccccaaaaaagat
cttattgagttgtgtgatatgtcagagaaacaggaacagctgtactatgacctcttcaac
aaactaaagaaatctattgacagccaggaaaaaaactcagaaatgggcaatgtcatgatg
cagctgagaaaaatggcaaatcatcctctcttacaccgccagtattacacagctgacaaa
ctgaagatgatgtcaatgcttatgctcaaggaacccacacattgtgatgccaatcctgac
ctcatcttcgaagatatgtctgtgatgacagattttgaactgcatttgctttgtaaacag
tatgctagtgtcagtgactttaagttagagatggatacaattttggattctggaaaattt
agaacacttgagcgcatcctctctgaccttaaagaaaagggtgatagagttgtattgttt
agccagtttactatgatgctggacattttggaagttctcctaaaacagcaacagcaccga
tatattaggctggatggaaagacacagatttctgaaaggatacatctgatagatgaattc
aatacagatatgggtatttttgtattcctactttcgaccaaagctggtggcctaggaata
aatttgacttcagcaaatattgttattcttcatgacattgactgcaatccttacaatgac
aagcaagcagaagatcgatgccatagagtaggtcagaccagagaagtacaagtcataaag
ctaatcagtaaagggaccattgaggagtctatgctcaaaatcagtcagcagaagttgaag
ctagagcaagatatgactgcagtagatttaggagaagaagggaccattccagcagatata
gccacattattaaaaacttcattaggtctgtaa
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integrated database retrieval system
