Trachemys scripta elegans (red-eared slider): 117877784
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Entry
117877784 CDS
T07347
Symbol
SNX25
Name
(RefSeq) sorting nexin-25 isoform X1
KO
K17887
sorting nexin-25
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tst03029
]
117877784 (SNX25)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117877784 (SNX25)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
117877784 (SNX25)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117877784 (SNX25)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nexin_C
PXA
RGS
PX
GAS
Isy1
Motif
Other DBs
NCBI-GeneID:
117877784
NCBI-ProteinID:
XP_034627157
LinkDB
All DBs
Position
5:79259416..79431506
Genome browser
AA seq
1041 aa
AA seq
DB search
MFPDADSTSSSGQPESAGAAVSGAPGAHSPGGQSCSSSAPAAAAVAGGEEEADDEEEEED
PGSSRLMLAAGLGLLAVSVFHLGRAEAGDGGQPCLALLLLRLALYLGCAAAAFLLGTLLA
LSCPTRGRLRPPPDFPAAWSRESRGDAPLLRAATSHLSGNAHESLQSRRVVISHNMDKAL
KEVFDYSYRDYILSWYGHLSKDEGQLYHLLSEDFWEIAKQLRQRLSHMDVVKVVCSDVVK
TLLTHFCDLKAANARQEEQPRPFLLHPCLRNSDEEVRFLQSCSEILVYCLLPSKDSQSLS
LRIVLADILATKVLKPMVELLSDPDYVNQMLLSQMEYREQVNEHHKKAYTYAPSYEEFIK
LINSNSDVEFLKQLRYQIVVEIVQATTISNFPQMKRQKDTKGKETAAMKADLLRARNVKR
YINQLTVAKKQCEKRIRLLGGPAYDQQEDGISDEGDGPQSQKILQFEDILANPSYREHFR
LYMERMDKRALISLWESVEYLKNANKTEIPQLVSEIYQNFFVESREIPVEKSLYKEIQQS
LVGNKGIEVFYKIQTDVYETLKDRYYPSFIVSDLYERLIKKEEERIAVQLTSEDKDEVSQ
GCEEVIDECSARINEQANYAVNKLRQLNDKLEYKRQALNSICNSPKPDKKIVSKLKDEIT
LIEREHSDLRLHIARTDWWCENLGMWKAFINTGEVVEENGEQVPCYFVMVSLQEVGGAEA
KNWRVPRKLSEFQNLHRKLSECFPSLKKVQLPSLSKLPFKSVDQKFMEKSKNQLNSFLQK
LLSDERLCQSEALYAFLSPSPEHLKVIDVQGKKSAFSLSSFLERLPGDFFPHQEEETEED
SDLSDYGDDVDGKRDALAEPCFMLIGEIFELRGMFKWVRKTLIALVQVTFGRTINKQIRD
TVSWIFSEPMLVYYISVFRDAFWPNGKLAAPTRSKGEEQSQETKQRAQQKLLENIPDTLQ
SLVGQQNARHGIIKVFNALQETRANKHLLYTPYRGKHGARPAQLSISTAVVSWVLLAADG
AVGLQTIVIHCFRCNSALLVP
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgttccccgatgccgacagcactagcagcagcgggcagcccgagtcggcgggcgccgca
gtctctggcgccccgggagcgcacagccccggcggccagtcctgtagcagcagcgctcca
gcggcagccgccgtcgccggcggggaggaggaggcggacgacgaggaagaggaggaggat
cccggctcgtcccgcctgatgctggcggccgggctggggctgctggcagtgtccgtgttc
cacctggggcgggcggaggcgggggatggggggcaaccgtgcctggccctgctgctgttg
cggctggccctctacctgggctgcgcggcggccgccttcctgcttggcaccttgctcgcc
ttgagctgcccgacccgcgggcgcctccggcccccgccggacttccccgccgcctggagc
cgcgagtcgaggggggacgctccgctcctgcgggcagccacgagtcatttgtctggaaat
gcacatgaatcgctccagtctaggagggtggtcatttctcataacatggataaagctctg
aaagaagtgtttgactacagctacagagattacattctgtcctggtatgggcacctcagc
aaagatgaaggacagctataccacctgctatctgaagatttctgggaaatcgccaagcag
ctgcgacagaggctgagtcacatggatgtagtgaaagttgtctgcagtgatgtagtgaaa
actttactcacacacttctgtgaccttaaagcagccaatgccaggcaggaggagcagcca
aggccatttttacttcatccatgcttgaggaactctgacgaagaagtaagattcctgcaa
tcatgttctgaaattctggtgtattgtctcctaccctcaaaggattcccagtctctcagc
ttgcgcatagtccttgcagacatacttgcaacaaaagtactgaagccaatggtggagctg
ctgagtgatccagattatgtcaaccaaatgctgctcagtcagatggagtacagagaacag
gtgaatgagcatcacaagaaagcctacacatatgctccttcttatgaggagttcatcaag
ctcattaacagcaactctgacgttgaattcctgaaacaactaaggtatcaaatcgtagtg
gaaatagttcaagcaaccacaatcagcaactttccccaaatgaagagacagaaagatact
aaaggtaaagaaactgctgcaatgaaagctgacctcttgagggcccgcaatgtgaaaagg
tacattaatcagctgactgtggcaaagaagcagtgtgagaagagaataaggcttctagga
ggtccggcttatgaccagcaggaggatggtatctctgatgagggtgatggccctcagagc
cagaagattcttcagtttgaggatattttggccaacccatcctaccgagagcactttcga
ctgtatatggaaaggatggacaagagggctttgattagcctttgggagtccgtggaatat
ctgaagaatgctaacaagactgaaatacctcaattagtgagtgaaatttatcagaatttc
tttgtggaaagcagagaaatccctgtggaaaagtcactttacaaagaaatacaacaaagt
cttgtgggcaataaaggcattgaagttttctacaaaattcagactgatgtttatgaaaca
ctaaaggacagatactacccctccttcattgtcagtgatttatatgagaggctgatcaag
aaggaagaagagagaattgcagttcagttgacttctgaggacaaggatgaagtgagccaa
ggttgtgaagaagttattgatgaatgcagcgcaagaattaatgaacaggccaattatgct
gtaaataaacttcgccagctaaatgacaaacttgaatataagagacaggctcttaattcc
atatgtaattcaccaaaacctgacaaaaagattgtttccaaactgaaggatgaaattact
ctaatagagagagaacacagtgaccttcggttgcacattgcaagaacagattggtggtgt
gaaaatcttggcatgtggaaagccttcataaatacaggcgaggttgtagaagagaatggg
gaacaagtgccctgctactttgtcatggtgagtttacaagaagttggtggagctgaagct
aagaactggagagttcccagaaagctcagtgagtttcagaatctacaccgaaaactcagt
gagtgttttccatcattaaagaaagttcagttgccttctctcagtaagctgcccttcaaa
tctgtagatcagaaattcatggaaaaatccaagaatcagttaaatagcttcttacagaag
ctgctttctgatgaaagactgtgtcagagcgaagcactttatgcctttttgagcccatcc
cctgagcacctcaaagttattgatgtgcaaggaaagaaatctgccttttcactctcatca
tttctggaaagacttcctggtgatttctttcctcatcaagaggaggagacagaagaggat
agtgacctgtcagactatggagatgacgtggatggtaaacgagatgctcttgctgagccg
tgcttcatgctgattggagagatttttgagctgcgaggaatgtttaagtgggtcagaaag
acactaattgcactagtacaagtcacttttggaagaactatcaacaaacaaatacgtgac
acagtaagctggatattcagcgagccaatgcttgtttactacatcagtgtattccgagat
gctttctggccaaatggaaaattagcagccccaacaagatccaaaggtgaagagcaaagt
caggagacaaaacagagagcacagcaaaaactacttgaaaacattccagatactctacag
agccttgttggacaacaaaatgcccgtcatggtataatcaaagtgttcaatgcactgcaa
gaaactagagccaataagcatctgctatatacgccataccgcggcaagcatggagcccgc
ccagctcagctcagcatcagcactgctgttgtgtcctgggtgctgctggcagcagacggt
gcagtaggtctgcaaaccattgtcatccactgcttccgctgcaactctgctctcctggtg
ccatga
DBGET
integrated database retrieval system
