Trachemys scripta elegans (red-eared slider): 117877797
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Entry
117877797 CDS
T07347
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin isoform X1
KO
K06548
sialoadhesin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117877797 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tst04090
]
117877797 (SIGLEC1)
04091 Lectins [BR:
tst04091
]
117877797 (SIGLEC1)
CD molecules [BR:
tst04090
]
Proteins
117877797 (SIGLEC1)
Lectins [BR:
tst04091
]
I-type lectins (Siglecs)
117877797 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
Ig_4
Ig_5
Izumo-Ig
C1-set
Ig_CD22
C2-set_2
phage_tail_N
Motif
Other DBs
NCBI-GeneID:
117877797
NCBI-ProteinID:
XP_034627186
LinkDB
All DBs
Position
5:complement(137630485..137697955)
Genome browser
AA seq
1694 aa
AA seq
DB search
MSFLFQLIFLASHAQQVFGSWGVTYPQSLQSVQDSCLQIPCTFSYPSTENPEGGIVAIWY
KDYESQHTVIYHSATPSEVNSRFQGRTELLGDLARHNCTLLLRGVRSEDSGKYNFRFEIN
QGNRWSDLRGVMVTVTDAPTSPAIAAPEDLREGVRVNFTCSSPYACPYESTALQWSGYNA
LLSTVSGAVQLDTAGVLSRQILVTSLSWQDHSKKLLCEVSVGSKQATGEIVLQVKHSPKG
TKVVITPSTKNIRVGDSVSLTCSVNSTFPEVTAYKWYKGGTALGSQQILTLQSVVREDYG
PYHCEAENSVGTGVAEAVVLYVFSAVVSVSPSAEIQAGETVTLTCAVPGEENQDLSYTWY
KNNVWIKEGTVRSLVFHEVTSSDTGYYSCKVQNDKGSQMSQAISLSVFYPPRALAITLFQ
ETQEGKLALIHCTVDSDPLSALALYRNEALVATTSSHAAPSQRLSITASRNSLKLEILNV
LPEDDGQYRCTASNAYGNVTAAKLFHAQTARVLISPAPEVREGDTVTLTCVTTRSAEEGP
SYTWYKNTAWLKESSENTLVLPAASSGDAGAFQCKAQTKRGSSTSPAVTLRVLFPPRRPQ
MSSLLETQNRHLGIVLCTTDSDPQSELALYRGDELVASTSGSRSLAGQRLRATPSYNSLK
VEIREVVLEDEGTYVCLARNAYGNASTSMVFSAETARVIATPASEVQEGQGVNLTCQVSS
NSSSMTNYSWYRNGQWLSTGLANSLVFQQVASADAGVYYCKATNNGTSRSSALVSLNVLY
APRNPRMTSFLEADMGRLAIIRCVVDSNPPAQLSLYKGDELVASTSSRTAAAQRIGIAAS
PNSLRVEIRDITLEDEGNYRFTASNAYGTSSGHLYFRVQTARVLVTPSTDVQEGEDVSLT
CDVTGNAPEGAIYTWYKNSHRLQESSESSLAFPHVTSGDTASYHCKAHSPEGTSSSISPA
VRLQVSYPPREPELTSFLETPDGQLGVLQCTVDSDPQSQLSLFRGGELVASTTGSHRAAG
QRVSVSSSHNSLKVEIQAVVMEDEGEYVCSASNAYGNSTTSLNFTAETARVWISPSPDVH
EGDAVNLTCAVDSDAPGMPHYTWYKNNVWFSKGPGRSLMFPKVTTADAASYHCTVKTQER
VRSSSPGTLNVLYPPRNLWVKSFLETQDGKLAIIVCAVDSNPQSELALRRAGELVASGSS
RGDGASGQRLRVSSSPNTLKLEIRSVTLEDEGTYVCSANNAIGEASTSVYFTIETVRVVI
LAGPDVREGDRITLTCEDTSARPSTIYTWYKNTKWLAEGPGSSLTIRGAAGTDAGLYSCT
AHNDRGRRTSLPTALRVLYAPRKPSLISFLDAQDGHQAIIQCTVDSHPPSDVALYRGAER
TPMASTRGSRGSPNQRLSIHVSHNSLKVEMKDVMLEDAGQYVCSANNTYGSAAASVRFGV
ETVRIMIEPSQEIHEGVTVNVTCLVADWLGGETNYTWYKNSKWLQDGPVRSLHLDRVSSA
DTGSYHCRAEGRTGSAISALVSLDVLYAPRNPSMNAFLENRNARVGLIHCTADSNPRAEL
ALYREDKLVGSSQGPRSAASQRVSVFPSYNTLRVEIWDVTSADSAEYTCVASNALGNVTI
ASYFSAQTLADLRLYKILAGMFIAALGAIVLAVAVVLLWPRITKLAKPLKDESAMELTGT
REQSQVDDTSSINR
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcttatttcagcttatcttcctggccagtcatgcccagcaagtctttggctcg
tggggcgtcacctacccccaaagcctgcagagcgtgcaggactcctgcctccagataccc
tgcaccttcagctaccccagcacagagaaccccgagggtggcattgtggccatctggtac
aaggattacgaaagccagcacaccgtgatttaccactcggccactcctagcgaggtcaac
agcaggttccagggccggaccgagctgctgggcgacctagccaggcacaactgtaccctg
ctgctgaggggtgtgaggagcgaggacagcggcaagtacaacttcaggttcgagatcaac
cagggcaaccggtggtcagacctgcgtggggtgatggtgacggttaccgatgcccccacc
agcccggccattgctgccccggaagatctaagggagggtgtgagagtgaacttcacctgc
tccagtccgtacgcctgcccatacgagagcaccgctctgcagtggagcggctacaatgcc
ctgctctcgaccgtatctggggcagtgcaactggacaccgctggagtgctcagccggcag
atcctcgttacctccttgtcatggcaggaccactccaaaaaactgctctgcgaagtgtct
gttggctccaagcaggcaaccggggaaatcgttctgcaggtgaaacattccccgaaaggc
acaaaagtggtaatcaccccctccacaaagaacatccgggtgggcgacagcgtgtctctc
acgtgcagcgtgaacagcaccttccccgaggtcaccgcgtacaagtggtacaagggcggg
acggccttggggagccaacagattctgactctccagagcgttgttcgcgaagattatggc
ccgtaccactgtgaagcggaaaattccgtcgggaccggggtggcggaagcagttgttctc
tatgttttttctgccgtggtctcggtgagcccttctgcagagatacaggcaggcgagacg
gtcactttgacgtgcgccgttcccggcgaggagaaccaggatctcagctacacctggtac
aagaacaatgtctggatcaaggaaggcacggtccgctccctggtgtttcacgaagtcacc
agcagcgacaccggctattattcgtgcaaggtgcagaacgacaaagggagtcagatgtcc
caggccatcagcctgagcgtgttctatccccctagggcccttgcaatcaccttgttccag
gagacgcaggaaggaaagctggctctcattcactgcaccgtggatagcgaccccctgtct
gcactggccctttaccgcaacgaggccctcgtcgccaccaccagctcccatgcagccccc
agccagcggctcagcatcacagcttcccgcaactccttgaaactggagatcctcaacgtg
ctgccggaggacgacggccaataccggtgcacggcgagcaacgcgtacgggaacgtgact
gctgctaagctgttccatgcccaaacagcgagagtgttgatcagtcccgccccggaggtg
cgcgaaggagacacagtcaccctgacgtgtgtcaccacccgaagtgcagaggaggggccc
agctatacctggtataagaacacggcgtggctgaaggagagctccgagaacaccctggtc
ctcccagccgcgagcagcggggacgcgggcgctttccagtgtaaggcccagacgaagaga
ggcagcagcacctctccggctgtcactctgcgggtgctgttcccaccgagacggccccag
atgagctccctgctagagacgcagaacaggcacctgggcatcgtcctgtgcaccaccgac
agcgacccgcagtccgaattagccctgtacagaggagatgaattagtagcttccaccagt
ggctcccgctcgttggccggccagaggctcagggcgactccatcgtacaacagtctgaag
gtggagatccgcgaggtggtgctggaggacgaagggacctacgtgtgcttggctaggaac
gcctacggcaatgcaagcacctccatggtcttcagtgcagagacggcgagggtcatcgcc
acaccggcctcagaggtgcaggaaggccagggggtcaacttgacctgccaagtgagcagc
aactcatcgtccatgactaattacagctggtacagaaatggccagtggctgtccacaggc
ctggccaattccctggtgttccagcaggtggccagtgcagacgccggggtctattactgc
aaggcaacgaataacggaacaagcagaagctccgccttggtctcgctgaatgtgctgtac
gcccccaggaatccccgaatgacctcgttcctggaggcggatatgggcagactggccatc
atccggtgtgtggtggacagcaaccccccggcccagctgtccctgtataaaggagatgaa
cttgtggcctccaccagttccaggactgcagccgcccaacggatcggcatcgctgcctcc
ccgaactccctgagggtggagatccgggacatcacgctggaggacgaagggaactatcgc
ttcaccgctagcaatgcatatggcacatcttctggccacctgtacttccgtgtgcaaacc
gccagagttctcgttacgccctccacagacgttcaggaaggggaggatgtctccctgaca
tgtgatgtgacaggaaatgctccagagggcgccatctacacctggtacaaaaacagccac
cggcttcaagagagctcagagagctccctcgccttcccccacgtaaccagtggggatact
gcctcttaccactgcaaagctcacagccccgagggaaccagcagcagcatctccccagcc
gtccgcttacaagtctcttatccaccccgggagcccgagttgacctccttcctggagaca
ccggatgggcagctgggcgttctccagtgcactgttgatagtgacccacagtcacagtta
tctctgttcagaggaggtgaacttgtggcttccaccactggctcccaccgagcagccgga
cagcgagtcagcgtctcctcatcacacaacagcttgaaggtggagatccaggctgtggtg
atggaggatgaaggagagtatgtgtgttctgctagtaacgcgtacggcaactcaaccacc
tcactgaacttcactgcagagactgcaagggtctggatctctccttcgccggatgtccac
gagggggatgctgttaacctgacctgtgcagttgacagtgatgccccggggatgccgcac
tacacctggtataagaacaacgtatggttcagcaagggccctggcaggtcacttatgttt
cccaaggtcaccaccgctgatgctgcatcctaccactgcacggtgaagacccaggagagg
gttagaagctcttccccaggcactttgaatgtcctctatcctcccaggaatctctgggtg
aagtccttcctggagactcaagatgggaagctagccatcatcgtctgtgctgttgacagt
aacccgcagtcagaactggccctgcgcagagctggtgagctggttgcttctggttcctcc
cgaggtgacggggcatccggacagaggttacgcgtctcgtcctctcctaacaccttgaaa
ctggagatcaggagcgtcaccttggaggatgaagggacgtacgtgtgctcggcaaacaat
gcgatcggcgaggccagcacctccgtatacttcaccatcgagactgtgagggttgtgatc
ctagcaggtcccgatgtacgtgagggggaccgcatcacactgacctgtgaggataccagt
gcccggccgagcaccatttatacctggtacaagaacaccaaatggctggcggagggccct
ggcagttccctcacgatccgtggtgcggcgggcactgatgctggcttgtactcctgcacg
gctcacaatgacaggggaaggaggacatctctgcccaccgccttgcgcgtgctctacgcc
ccaaggaagccctcactcatctccttcctagatgcccaggatgggcaccaggccatcatc
caatgcactgtcgacagccacccaccgtcagatgtagccttgtaccgaggggctgagcgc
acgcccatggcttccacccggggttctcggggctcacccaaccagcggctgagcattcac
gtgtcccacaactccctgaaggtggagatgaaggacgtcatgctggaggacgcaggccag
tacgtctgctcggctaacaacacctacggcagtgccgcagcatccgtgcgcttcggtgtg
gagactgtcagaatcatgattgaaccatctcaggaaatccacgaaggagtcacagtcaac
gtgacctgcctggttgccgattggctcgggggcgagaccaactacacctggtataagaac
agcaagtggctgcaggatggtcccgttaggtcgctccaccttgatagggtctccagcgcc
gacacggggtcataccactgtcgggcagaggggaggacaggaagtgccatctctgccctg
gtcagcttggatgtgctctatgctccaaggaacccatcaatgaacgccttcctggagaac
cgcaatgcaagggtgggcctcatccattgcacggctgatagcaacccacgggctgaatta
gccctgtacagagaggataaactagtgggttccagccaaggtccacgctcagcagccagc
cagagggtcagtgtgtttccatcctacaacaccttgagagtggagatctgggacgtcaca
tcagcggattcagcagaatacacgtgcgtggccagcaatgcactgggcaacgtgacaatc
gcctcctacttcagtgcgcaaactctcgctgacctccgcttgtacaagatcctggccggg
atgttcatcgcagcgctgggggctattgttctggccgttgcagtggtcctgttatggccc
aggataacgaagctagcgaagccgctaaaagacgaaagcgccatggaactgaccggcaca
agggaacaatcgcaggttgacgacacctcctcgatcaacagataa
DBGET
integrated database retrieval system
