Trachemys scripta elegans (red-eared slider): 117877845
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Entry
117877845 CDS
T07347
Symbol
PTPRB
Name
(RefSeq) receptor-type tyrosine-protein phosphatase beta isoform X1
KO
K05694
receptor-type tyrosine-protein phosphatase beta [EC:
3.1.3.48
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117877845 (PTPRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tst01009
]
117877845 (PTPRB)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117877845 (PTPRB)
Protein phosphatases and associated proteins [BR:
tst01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117877845 (PTPRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Y_phosphatase
Fn3_Dep-1_4th
FN3_Tor_3rd
Ig_ILCR1
PTP_tm
CysR_MRC2_N
Tc-R-P
DUF4249
Ricin_B_lectin
Interfer-bind
PTP-SAK
PTP-NADK
DSPc
Y_phosphatase3
Glyco_hydro_66
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
117877845
NCBI-ProteinID:
XP_034627305
LinkDB
All DBs
Position
1:complement(64329320..64416706)
Genome browser
AA seq
2211 aa
AA seq
DB search
MDPLFHVLIFTCLAFKISEGFLIIHVQKRQCLVGGKTAFVGKCNLTDPNQQWRWTEDEKL
LQVRSGQCLGISKSSAASSRSIFIDCPQAPSWIFHNTEGLLQVANSSLFLTKQGPRVMIK
KGRKYPHSWKQIDVDDKGKTAYENLCPHKDPHWIFCILENSRSTSSPFNAITSTPGYFLK
SSTEIFIRNITENYSKNINEKLHLNLKLSAVKEKSWIPTTTHHYFSTTEEKGHGEPVKCA
INLTEWRVSSQSVYLKWSSLGNLCNFTLTCSSDNASHTECHPVQKTNESYECSYNGLEAG
TLYHLRIFSLSDTETSNISLQTDPLPPATFEINKEKTTSTSLQVLWSPSSGKVDWYELQL
SDHNNKKIQNVSIQGGISRREETFSNLTPGSKYNVIITAVAGNKSTSAIHISGSTVPSPV
QNIQISVKTDTIHVSWLPGSGYVDRYRLVLLDKEGPVREINYEERLLSYTFLGLTAGHLY
NLTIIAEAAGLESYNFKLVRTAPAEVSDLMVTSDGSLDILKVTWKRPLGNLDFYNITLSH
LGSIKEIKTLQPQVTEAQFDKLIPGSLYEVTVSTITGELFTDKKATGRTVPQKVSELKAS
SDGCLRSLTVSWLPPAGDWDRYYIVLFNLSTVLLNTTLKKDRREYVIQDIGLIPGRQYEV
AVIVESGGLQNTARCKGRTAPQPVLQLRVKHANESSLSVMWMTPFAEWDSYVVSLGYRDL
TIINKALVKEAKEYTFSDLVPGRKYTATVTSISGDLSNWTSVEGRTVPAQVTSLHVTNQG
ATNSLFTNWTRALGDVESYQVLLIHENVVIKNESVSSETSRYHFHSLKAGGLYSVVVTTV
SGGILSRQTIAEGRTVPSSVSGVTVNNSGRSDYLSVSWLPATGDVDSYLVTLSHDSQTVQ
TLTISKALSECSFSSLVAGRLYNVMITTKSGKYENHSFSQERTVPSSVQGLTVSNSARSD
YLKVSWLHATGDFDNYKVIIKNNNDFNQTKRVPKDENECVFTKLVPGRQYSVTVSTQSGK
YETSKRINGRTMPESVKELTLSNRSTEDLQVTWSKAEGDVDKYEIQLLFNDMKVFPPIFL
GNTIEEYWFTALTPGRLYKILVLTISGDTQRATFIEGLTAPSAVKNIHVSANGMTNSLKV
NWTPGGGDVDSYTVTLFHQNYQLDSQTVSKPVYEHTFSKLEAGEQYRVVVQSNSGTLHNS
LTALGRTIPASVQGLFADHAYSSHSLLVTWHSAPGVAERYDILLLTEQGILLSNKSEPAT
AKQHKFEDLIPGKKYKVQMLTVSGGLFSRRAETEGRTVPSAVTNLKVTENTNGRLSFSWT
TSQGELDSYNIFLYNPDKSLQGRISGDPNLQQCSFQNLRQGRMYKMVIVTHSGELTNESS
VFGRTVPAPVINLNGSNRNMTDSLWFTWGPASGDVDYYELNLYNPNGTQKETRNGKDLRE
WHFLGLVPGRKYTLVVVTHSGDLTNTAKTEGRTAPSPPSAVSFADVANTSLSITWLGPPD
WTDYDDFELQWFPRDPLTVFNPYSNSRSKGRIMYGLRPGRLYHFSVRSVSGNTWKTYSQS
LSGTVRTRPDRIQNLHCRPQNSTAIACSWTPPDSDFDGYSIECKKMDTGEVEFSKRIEKE
RSLQNIMMLVPHKRYLVSIKVQSADMTSEVVEDSTITMIDRPPPPPLHIRVNKKDALITK
SSINFTFNCSWFSDTNGAVKYFTVVVREADGSEELKPDQQHPLPSYMEYKHNNSIRVYQT
NYFASKCAENLDSSYKSFDIKLGAEMESLGGKCDPNQQKFCDGPLKPRTAYRISIRAFTQ
LFSEDLREFTEPLFSDTFFSLPITTESEPMFGVIEGVSAGLFLIVMVVAVTALFVYKQKI
SNGHERPTARLSVRRDRPLSVHLNLGQRGSRRISSPIKINQFEGHFTKLQADSNYLLSKE
YEDLKDVGRNQSCDIALLPENRGKNRYNNILPYDSSRVKLSNVDDDPCSDYINASYIPGN
NFRREYIATQGPLPGTKDDFWKMAWEQNVHNIVMVTQCVEKGRVKCDHYWPLDQDSLYYG
DLIVEMLSESVLPEWTIREFKICSEEQLDSKRLIRHFHYTVWPDHGVPETTQSLIQFVRT
VRDYINRTLDTGPTILHCSAGVGRTGTFIALDRILQQLDSKDSVDIYGAVHDLRLHRVHM
VQTECQYVYLHQCVRDVLRARKLRSEQENPLFPIYENVNPEYHRDAVYSRH
NT seq
6636 nt
NT seq
+upstream
nt +downstream
nt
atggatcctttatttcatgtcctgattttcacctgcctggccttcaagatctcagaaggg
tttctgattatccatgtccagaaacggcaatgtcttgttggaggcaaaacagcatttgtg
ggcaagtgcaatctgactgatccaaaccagcagtggaggtggacagaggatgagaagctg
ctccaggttagatctggccagtgtttgggcatctccaagtcctctgctgcatcatcccgc
agcatcttcatagactgccctcaggcacccagctggatcttccacaacacggaagggctc
ctccaggtggcaaacagctctctctttctcacaaaacaaggcccgagggtaatgatcaag
aagggtagaaaatacccccatagctggaagcaaatagatgtcgacgacaagggaaaaact
gcctatgaaaatctgtgcccacacaaagatccgcactggattttttgcatcttggagaac
agtagaagtacctcctcaccctttaatgctattacatctactcctgggtatttccttaag
agtagcacagagatcttcatcagaaatattacagaaaactacagtaaaaacattaatgaa
aaactccatctgaacctgaagttgtctgcagtaaaagagaaatcctggattccaacaact
acccatcattacttcagtaccacagaagagaaggggcatggggagcctgtgaaatgtgcc
atcaacctgacggagtggagggtttccagccagtctgtctatctcaaatggagcagtttg
gggaatctctgcaacttcaccctgacgtgcagctctgacaacgcctcgcacacagagtgt
catcccgtccagaagactaacgagtcctacgaatgcagctacaatggcttagaagcaggg
actttgtatcatctcaggattttctctctctctgacacagaaacgagcaacatctccttg
caaacagatcccttaccaccagctacatttgaaattaataaggaaaaaactacttccaca
agcttgcaggtcttgtggagtccatcctcaggaaaggtggattggtatgagctacaatta
tctgatcataataataaaaagatacaaaatgtctcaatacaaggaggtatttcaagaaga
gaagagaccttttccaatctcacccctgggagcaaatacaatgttatcatcactgcagtt
gctggaaataaaagcacctcagcaattcacatcagcggatctactgtgccatccccagtg
caaaacattcagatcagtgtcaagacagacactatccacgtttcatggttacctggttct
ggttatgtggatcgatacaggctggtattactggataaagaaggaccagttcgtgagatc
aactatgaggaacgcttactttcctacacttttcttggacttacagcaggacatctgtat
aatctcactatcatagctgaagctgcaggactagagagctacaactttaaactggttagg
acagccccagcagaagtctcagatttgatggtgacgagtgatggcagcttggatatatta
aaagttacatggaaaagacctctaggaaacctagatttctacaatatcactctgtctcat
cttggatccattaaagaaatcaaaactttacagccccaggtcacagaggctcagtttgac
aagttgattccaggaagtctttatgaggtcactgtcagcacaatcactggtgaattattc
actgacaagaaagcaactggcaggacagttcctcagaaagtttcagagctgaaagctagc
agtgatggttgtctgaggtctctgacagtgagctggctgccccctgctggagactgggac
agatactacattgtgttgttcaacctctccactgtgctgctgaacactacattaaagaaa
gacagaagagaatatgtcatccaggatataggactcatcccaggaagacaatatgaagtg
gcagtcatagtggagagtggaggcttacagaacacggctcgctgcaaaggcagaacagct
ccacagcctgttcttcagctccgggtaaagcatgctaatgaatcttcgcttagtgtcatg
tggatgaccccttttgcagaatgggacagttacgtggtttcactgggatacagggatctt
accatcataaacaaggctcttgtgaaagaagctaaagaatatactttcagtgatctggta
cctggacggaaatacacagctacagtcactagcattagtggggatttaagcaactggact
tcagtagagggaagaacagtgccagctcaggtgactagcctgcatgtgacaaaccagggg
gcaaccaacagtttgttcaccaactggacgagggcactgggagatgtagagtcgtatcaa
gtgctgctgattcacgaaaatgttgtcattaaaaatgagagtgtttccagtgagaccagt
agataccatttccattctctgaaagccggaggactctattccgtggtcgttaccacagtt
agtggagggatattatccagacagacgattgcagaagggaggacagttccttccagtgtg
agcggagtaacggtgaataattcgggacggagcgactacctcagtgtttcctggctgcca
gctaccggagacgtggatagttatttggtaacactctctcatgacagccagacggttcag
actctaaccatttccaaagccctcagtgaatgttctttcagcagcctggttgccggcagg
ctctacaatgtgatgataaccacaaagagtgggaagtatgaaaatcattccttcagccag
gaacgaacagtaccttcaagcgtgcagggacttactgtcagcaattcagcaagaagtgac
tatttaaaggtgtcctggttgcatgccactggagattttgataattataaagtgatcatc
aagaacaacaatgacttcaaccaaacaaaaagagtccccaaggatgaaaatgaatgtgtg
ttcactaaactggtcccggggaggcaatacagtgtcactgttagcacacagagtggaaaa
tatgagactagtaaaaggatcaatggcagaacaatgccggagtcagtgaaggaattgact
cttagtaacagaagcactgaagacctgcaagttacctggtcaaaggctgagggggatgtc
gataagtatgagattcagctacttttcaatgatatgaaggtctttccacccattttcctt
ggaaacaccattgaggagtattggttcacagctttaaccccagggcgcctgtacaaaatt
cttgtcttgacaatcagtggagacacacaacgtgccactttcatcgaaggactgacagct
ccaagtgctgtcaaaaacattcacgtttcagccaatgggatgacaaacagcctgaaagtg
aactggactcctggaggaggagatgttgattcctacacagtgacactattccatcaaaac
tatcagcttgattcccagactgtctccaagcctgtctacgagcataccttcagcaagtta
gaagcaggagagcagtaccgggttgtggtacagtctaacagcggcaccctgcacaacagt
ttaacagctctcggacgtacaattcctgcctctgtccagggattatttgcagatcatgcc
tacagcagtcattccttgttagtgacctggcacagtgctcctggagtggctgagagatat
gacatcctgctcttgactgagcaaggtatccttctgagcaataaatcagagccagcaact
gctaaacagcacaaatttgaagatttaataccaggcaagaagtataaagtgcaaatgttg
acagtcagcggtgggctcttcagcagacgagcagaaaccgaaggccgaacagtcccatcc
gctgtcacaaatctaaaggtcacagaaaacaccaatggacgcctatcattcagctggact
acctcccagggagaactggactcctataatatctttctgtacaatccagacaaatccctc
cagggcagaatttcaggggacccaaacctccagcagtgttctttccagaacttacggcaa
ggcaggatgtataaaatggtgattgttacccacagtggagagctcacaaatgagtcatct
gtatttggaagaacagttccagccccagttattaatctcaacggctccaacagaaacatg
acggacagtctgtggttcacctggggaccggcatcaggagatgtagattattatgaactg
aatctttataacccaaatggcacacagaaggaaacaaggaatgggaaagacctgagagag
tggcatttcctgggcctagttcctggcagaaagtacaccctggttgtagtgacccacagc
ggtgacctgaccaatacagcaaagactgagggaagaacagcacccagtcctcctagtgct
gtatcatttgctgatgttgcaaacacctccctgtcaatcacctggctgggtcccccagac
tggacggattatgatgactttgagttgcaatggttcccaagagatccccttacagtcttc
aacccgtacagcaacagcagatcaaagggacgcatcatgtatggccttcgaccggggcgg
ctctatcatttcagtgtcaggagcgtcagcggcaacacctggaagacatacagtcaatca
ctgtctggaactgtgagaacaagaccagacagaatacaaaaccttcactgccggccacaa
aactctactgccattgcatgttcctggaccccgcctgactctgacttcgatggatatagc
attgaatgcaaaaaaatggacactggagaagttgagttttccaaaaggatagagaaagaa
agatctttgcaaaatatcatgatgctagtaccccacaagagatatttggtgtccatcaaa
gtgcagtctgcagacatgactagtgaggtagttgaagacagcaccatcactatgatagac
cgcccccctcctccacctctccacatccgagtgaacaaaaaggatgcactcattaccaaa
tcttccatcaactttactttcaactgcagctggttcagtgacaccaatggagctgtgaaa
tactttactgtggttgtgagagaggccgatggcagtgaagagctgaagccagatcagcag
cacccattaccttcctacatggaatacaaacataacaattccatacgtgtctatcagaca
aactatttcgcaagcaaatgtgctgaaaaccttgacagcagctataagagctttgacatt
aagcttggagctgagatggaaagtctgggaggaaaatgtgatcccaatcagcagaaattc
tgtgacgggccactgaagccaaggactgcctacaggatcagtatccgagctttcacccag
ctctttagtgaagacctgagggaattcacggagccactcttctcagatacatttttctct
ttaccaatcaccactgagtcagagcccatgtttggagttatagaaggtgtgagtgctggt
ttgtttctcattgtgatggtggtggctgtcactgctttatttgtctacaaacagaaaatt
agtaatggccatgaacgacctacagcaaggctgagcgttcgcagggacaggccgttgtcc
gtccatctgaacttggggcagagagggagccggagaatttccagtccaataaagataaat
cagtttgaagggcacttcaccaaactccaagcagattccaactacctcctgtccaaggag
tatgaggacttaaaagatgtgggtcgaaaccaatcgtgtgacatagcgcttttgccggag
aacagagggaaaaatcgatacaataatatattgccctatgattcgtcgagagtgaagctt
tccaatgtagatgatgatccttgctcagattatattaatgcaagctacataccaggcaat
aattttcgcagggaatacattgcgactcagggccctttgcctggcaccaaagatgatttc
tggaagatggcatgggaacagaatgttcacaatattgtcatggtaacccagtgtgtcgag
aagggccgagtgaagtgcgatcattactggcccctggaccaggattccttgtattacgga
gacctgatagttgagatgctatctgagtcagtgcttccggaatggacaataagagagttt
aaaatttgtagtgaagagcagcttgactcaaagaggctcattcgtcactttcattacaca
gtatggccagaccatggagttccagagaccacccagtccctgatccaatttgtaagaact
gtaagggattatatcaacaggactctggacaccggaccaaccattctgcactgcagtgct
ggtgttggtaggacaggcacattcattgcactggaccgaatccttcagcaactagactct
aaggactcagtggatatttatggagcagtgcatgatctaagacttcacagggttcacatg
gttcagacagagtgtcagtatgtctatttacatcagtgtgtgagagacgtgttaagagca
agaaagctacgcagtgaacaagaaaatcccttgtttccaatatatgaaaatgtgaatcca
gagtatcacagagatgctgtttattcgagacactaa
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integrated database retrieval system
