Trachemys scripta elegans (red-eared slider): 117877930
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Entry
117877930 CDS
T07347
Symbol
ABRAXAS1
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1 isoform X1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117877930 (ABRAXAS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117877930 (ABRAXAS1)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
117877930 (ABRAXAS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MPN_2A_DUB_like
Tropomyosin
PRC2_HTH_1
HrpB7
Med9
GrpE
DUF2096_N
DUF948
Motif
Other DBs
NCBI-GeneID:
117877930
NCBI-ProteinID:
XP_034627489
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All DBs
Position
5:25616818..25637459
Genome browser
AA seq
407 aa
AA seq
DB search
MEGESTSALLSGFVFGALAFQHLNTDSDTEGFLLGEVKGEAKNSITDSQMDDVEVVYTID
IQKHIPCYQLFSFYNSAGELNEPELKKILSGCKKNVIGWYKFRRNTDQTMTFRERLLHRN
LQSYLSNQGLVFLLLTSSVTTESCSTYRLEHALHRPQEGLFQKVPLVVANLGMAEQQGYR
TVSGSCISDGFGRAVIKHRSEFFYEDGSLKEVHKINEMYATLQEELKKICSKVEGSERSV
EKLLAEVDQLKQAIKRKKEQTQTSGENKCVSDEPKENVFLCQALQTFFPNSGLQTSLVSL
KGRHISKHCCNTDHKINVMDKLTLMQEDSDFSEAGTRQITKRKASVTTAGRKPFKKSRSL
QLHHKLLKGDQDNRDQEGKLVMSGTETDEETLEKLKDTNEYPQSPTF
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggagggggagagcacctcggccctgctctccggcttcgtctttggcgccctcgccttc
cagcacctcaacaccgactcggacactgaaggcttcctccttggagaagtgaaaggtgaa
gccaagaacagcattactgactctcagatggatgatgttgaagttgtttatacaatcgat
atacaaaaacatattccatgctatcagcttttcagcttttacaactctgcgggtgaactg
aatgagcctgaattgaagaaaatattatcaggttgcaaaaagaatgtgataggctggtac
aaattcagacgtaatacagaccagacaatgacattccgagaaagacttcttcacaggaat
ttacaatcatacttatcaaatcagggtcttgtctttctgttactaacttccagtgtaact
acagaaagctgttccacttacagattggaacatgctttgcatagaccacaagagggtctt
ttccagaaagttcctctggtagttgccaacttgggtatggcagaacagcaaggttacaga
actgtgtctggctcctgtatttctgatggctttggcagagcagtaataaaacacaggtca
gaatttttttatgaagatggatcactaaaagaggttcataagattaatgaaatgtatgcc
accttgcaggaggaattgaagaagatatgttctaaagtagagggcagcgaacgatcagta
gagaaacttctagcagaagtggaccaactaaaacaagcaataaaaagaaaaaaggagcag
acacaaacttcaggagagaacaagtgtgtttcagatgaaccaaaggagaatgttttcctt
tgtcaagctttacaaacatttttcccaaattctggacttcagacctcccttgtttcctta
aaaggcaggcacatttctaaacactgctgtaacactgaccacaaaataaatgtaatggac
aaactgactctaatgcaagaagacagtgacttttctgaagctggaacaaggcagataacc
aagcgtaaagctagtgtgaccacagctggacgaaaaccattcaagaaatcacgctcatta
caacttcaccataagttacttaaaggggaccaagacaacagagaccaagaaggaaagctt
gtaatgagtggtactgaaacagatgaggaaactttggagaaactcaaggacactaatgaa
tatccacaatcgccaactttttaa
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integrated database retrieval system
