Trachemys scripta elegans (red-eared slider): 117877941
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Entry
117877941 CDS
T07347
Symbol
UVSSA
Name
(RefSeq) UV-stimulated scaffold protein A isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
117877941 (UVSSA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117877941 (UVSSA)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
117877941 (UVSSA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Motif
Other DBs
NCBI-GeneID:
117877941
NCBI-ProteinID:
XP_034627508
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All DBs
Position
5:complement(124112357..124192783)
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AA seq
784 aa
AA seq
DB search
MDQKLSQLVEDLTTSGEPQLNPEKMKELKKICKSSDEHISHAYHLLMTQLNQEHAEIRFS
AFQIVDELFTRSHQFRTLIISNFQEFLELTVETDHEQPLPPPKEVAQKLKKTAIKSVQAW
HEKYGEAYKKLSLGYHFLKQNKKVDFQDVNVRTLAERRREEEKQKRLDNIYKEKAKRAEK
EMEEMSQEIQDTLTEMENCFRLLMPDPFDFTVNDTELDPVTERTANEDKPTSSLSIQIAD
HQPSLLGHMDDEQPCCSKDLPSVSPCLIVGRNRDLNEELGLPEQKEIDRGERSEAEIIAT
AATDYDDYETFVRNHGLGSHKYTLNLEISTDVKVRENEDNTAIINNIIDAHKLIRNKFLP
SVQSWIQLFTRAGINDGCLRCAIDFKNKLETAMEKHKEMNIDYKERKRKVILRSTRSSTQ
ISDLHASTLDKVCVLKSCPGFAIYIMYMKVSDNEDDEDEFVEVPEKEGYEPHIPDHLRKE
YGLEPQSSLKALAKGMVVKPALLSFHSQSKKNEEELDPTCAAATLKLIRDKLPKLPSLNT
SASANPEPAASGELDSETGKLEEERAKAPIIPFGLDLYYWGQDQPTAGKILKFSSQHRFW
APNEMEEEVENKEVAEMLKSRCITFSGKFEPVKHKCRAPMPDGRLCERQDRVKCPFHGKI
IPRDESGNPVNPDDKMREEKKRFEKQAEQPEWQDPEFMREVEAATGVDLGSSRYSGKGKG
GKNKGKKRKYPNLTDLKQEANTSRSRLEKKVFNKGAMKRVVKAMNRMDQKKHEKFANQFN
YALN
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaaagctctctcagctggtcgaggacctcacaacctcaggagagcctcaactg
aatccagagaaaatgaaagagctaaagaaaatctgcaagtcttcagatgaacatattagt
catgcgtatcatctactgatgacacagctgaatcaagaacatgcagagatacgtttctca
gcttttcaaattgtggatgagctcttcacccggtcacatcagtttaggaccttaattatt
tcaaactttcaagaattcttggagctcacagttgaaacagaccatgagcagcctcttccc
ccaccaaaagaagtagcacaaaaactgaaaaaaacagccattaaatctgtacaagcttgg
catgaaaaatatggagaagcttacaagaaactctccctaggataccatttcttaaaacag
aacaagaaggtggattttcaagacgtaaatgtcagaactctagctgaaaggagaagggag
gaggagaagcagaaacgattagataacatttacaaagagaaagcaaaaagagctgaaaaa
gaaatggaagaaatgtcccaggaaatccaagacacactgacagagatggagaattgtttc
cggcttttgatgccagatccatttgacttcactgtgaatgatacagagttagaccctgtc
acggagaggactgctaatgaggacaaacctacttcctccttatccatacagatagcagat
caccagccatctttgcttggacatatggatgatgaacagccttgttgcagcaaggacctt
ccttctgtttccccatgtctaatagttggtagaaacagggacctgaacgaagagttgggg
ctgcctgagcaaaaggaaatagacagaggggaacgttcagaagctgaaataattgctact
gctgccaccgattatgatgactatgaaacctttgttaggaaccatgggcttggttctcat
aaatacactctcaaccttgaaatctccacagatgtgaaggtgcgtgagaatgaagacaat
actgccataataaacaatatcatagatgcacacaaactcatcagaaataaattcttgcca
tctgtgcagtcttggattcagttgttcaccagagcaggaataaatgatggttgtctaaga
tgtgccattgattttaagaataaattagagactgctatggagaaacataaggaaatgaac
attgactataaagagaggaaaagaaaagtgatattgaggagcacaagaagtagcacacag
atttctgatctgcatgcctcaacccttgacaaggtctgtgtcctgaagtcttgcccaggt
tttgcaatatatataatgtatatgaaagtctccgacaatgaagatgatgaagatgaattt
gtggaggtccctgagaaggaaggttatgagccccacattccagaccacctgcgtaaggaa
tatggattggagccccaatcatctctgaaagcattagcaaaaggaatggtcgtgaagcca
gctttgctgagcttccactcccagtcaaaaaagaatgaagaggaacttgatccaacctgt
gccgctgcaacattgaagcttatccgagataagctacctaagttaccatccctaaatacc
agtgcgtctgcaaatcccgagccagcagcttcaggagagcttgacagtgagacaggaaaa
ctagaagaagaaagagctaaagctcctataataccctttggattagatctttactactgg
ggacaggaccagccaactgctggcaaaattctcaaattttcttctcaacatcgattttgg
gcacccaatgaaatggaggaagaggtggaaaacaaagaagtagccgaaatgttgaaaagt
agatgcataactttttctggcaagtttgaaccggtgaaacataaatgtcgagcgccaatg
cctgacgggagactatgtgaaagacaggatagggttaagtgccctttccatgggaagata
atccctcgggatgaatctgggaatcctgttaatccagacgacaaaatgagagaggaaaag
aagaggtttgagaagcaggcagaacagccagagtggcaagacccagaattcatgagagag
gttgaagcagctactggagtagaccttggatcctctagatacagtgggaaaggaaaagga
gggaagaacaaagggaagaagaggaaatatccaaatctgacagacttgaaacaggaggct
aatacttctcgttcacggctggagaagaaagtcttcaataaaggggccatgaaacgggtg
gtgaaagcaatgaatcgaatggaccagaagaagcatgagaagtttgcaaaccagtttaac
tatgcattgaattaa
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integrated database retrieval system
