KEGG   Trachemys scripta elegans (red-eared slider): 117877946
Entry
117877946         CDS       T07347                                 
Symbol
WDR1
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:tst04990]
    117877946 (WDR1)
Domain-containing proteins not elsewhere classified [BR:tst04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   117877946 (WDR1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_Vps41 WD40_MABP1-WDR62_1st eIF2A Beta-prop_HPS5 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 PEP5_VPS11_N NBCH_WD40 Beta-prop_RIG_1st WD40_RFWD3 Ge1_WD40 Beta-prop_ELP1_1st PROPPIN WDR54 WD40_like RMC1_N Beta-prop_WDR11_1st Beta-prop_DCAF12 PQQ BBS2_Mid DUF5711
Other DBs
NCBI-GeneID: 117877946
NCBI-ProteinID: XP_034627522
LinkDB
Position
5:113147765..113175346
AA seq 607 aa
MPFESKKVFASLPQVERGVSKIIGGDPKGNNFLYTNGKCVVIRNIDNPAIADIYTEHAHQ
VVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRLAAV
GEGREKFGAVFLWDTGSSVGEISGHNKVINSVDIKQTRPYRIVTGSDDNCGAFFEGPPFK
FKFTISDHSRFVNCVRFSPDGNRFATSSADGQIFVYDGKTGEKICALGGNKAHDGGIYAI
SWSPDSAHLLSASGDKTAKIWDVGANSIVSTFNMGSNVLDQQLGCLWQKDHLLSLSLSGY
INYLDKNNPNKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDDFS
GKGHTNQVSRMAVDELDQLVSCSMDDTVRYTSLTKRDYSGQDVIKMDVQPKCLAVGPGGY
TVVICIGQIILMKNRKKCFAIDDPGYEPEVVAIHPGGATAAVGGQDGNVHLYSIQGTSLK
IDEKTLQAKGPVTDLAYSHDGAFLAVCDANKVVTVFSVADGYAEHNIFYGHHAKIVCLAW
SPDNEHFASGGMDMMVYVWTLSDPETRVKIPDAHRLHHVSSLAWLDEHTLVTTSHDASVK
EWSISYK
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgccgttcgagagcaaaaaagtgtttgccagccttccccaggttgaaagaggtgtctcc
aaaattattggaggggatcccaagggcaacaactttctgtataccaatggaaaatgtgtc
gtcatcagaaacattgataatccagcaattgctgatatctatactgagcatgcccatcaa
gttgtggttgccaagtatgcgcccagtggattctacatagcatctggagatgtctctgga
aagctaagaatttgggataccacacagaaggaacacctactgaagtatgaatatcagcca
tttgcaggaaaaataaaggatattgcctggactgaagacagcaagagacttgccgctgtg
ggggaaggcagggagaaatttggagcagtgttcctgtgggatactggctcttcagtcgga
gagatctctgggcacaacaaggtgatcaacagcgtggatataaaacaaacaaggccctat
cgtatagtaactggcagtgatgacaattgtggtgctttctttgagggaccgccattcaaa
ttcaagtttacaataagcgaccacagccgttttgttaactgcgtgaggttctctcctgat
gggaacagattcgctacatctagtgcagatggccagatttttgtctatgatgggaagact
ggagagaaaatttgtgctctgggtggaaataaggctcatgatggaggcatttatgctatt
agctggagccctgatagtgctcacttgctttctgcttctggagacaaaactgctaaaatc
tgggatgttggcgctaactctattgtcagtacgtttaacatgggatcaaatgttctggat
cagcagttgggttgcttgtggcagaaggaccatttactgagcctctccctctctggttac
attaactatttggataagaataacccaaataagcctctacgtgtcataaagggtcatagt
aaatcaattcagtgtctgacagtgcataaaaatggtggaaaatcctatatttactccgga
agtcatgatggacacattaattattgggattccgaaactggggaaaatgatgacttttct
ggaaaagggcatacaaaccaggtttctagaatggccgtggatgaattggatcagctggtc
agttgcagtatggacgacactgtgcgttatactagcctaaccaagagagactacagtggc
caggatgttataaaaatggatgttcaaccaaaatgtttagctgttggtcctggtggatat
acggtagttatatgcattggacaaatcatcttgatgaagaataggaagaagtgttttgca
attgatgatcctggctatgaaccagaagtggtggccattcatccaggaggtgctaccgct
gcagtgggaggacaggatgggaatgtccatctatattcaatccaaggaacctctctgaaa
atcgatgagaagaccttgcaagctaaaggtcctgtgactgatctagcatattctcacgat
ggtgcctttcttgcagtttgtgatgcaaacaaagttgtcactgtctttagtgttgctgat
ggctatgcggaacataacatcttctatggacaccatgcaaaaattgtttgccttgcctgg
tctccagacaatgagcattttgcttctgggggcatggacatgatggtttatgtttggacc
ttaagtgacccggagaccagagtcaagataccagatgctcatagactacatcatgtaagc
agcttggcatggctggatgaacataccctggtaacaacatcccatgatgcttctgtcaaa
gaatggtctatctcctacaagtga

DBGET integrated database retrieval system