Trachemys scripta elegans (red-eared slider): 117877958
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Entry
117877958 CDS
T07347
Symbol
SLC4A4
Name
(RefSeq) electrogenic sodium bicarbonate cotransporter 1 isoform X1
KO
K13575
solute carrier family 4 (sodium bicarbonate cotransporter), member 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117877958 (SLC4A4)
Transporters [BR:
tst02000
]
Solute carrier family (SLC)
SLC4: Bicarbonate transporter
117877958 (SLC4A4)
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Gene cluster
GFIT
Motif
Pfam:
HCO3_cotransp
Band_3_cyto
PTS_EIIA_2
DUF4770
Motif
Other DBs
NCBI-GeneID:
117877958
NCBI-ProteinID:
XP_034627556
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Position
5:complement(11927212..12177690)
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AA seq
1125 aa
AA seq
DB search
MEDEAVLDRGASFLKHVCDEEEVEGHHTVYIGVHVPKSYRRRRRHRRRPGLKEKKEREKI
SEYYSDKSDVENADETSSGILKPLISPAAERIRFILGEEDDSPAPPQLFTELDELLAVDG
QEMEWKETARWIKFEEKVEQGGERWSKPHVATLSLHSLFELRTCIEKGSILLDLEATSLP
QVVEMVVDNQIETGLLKLDMKDKVTYTLLRKHRHQTKKSNLRSLADIGKTVSSASRMFTN
PDNARSPLESSVPCLATRTLDDEIRVQRSPSVGWLSSPAMTHRNLTSTSLNDISDKPDKE
QLKNKFMKKLPRDAEASNVLVGEVDFLENPFIAFVRLQQAVMLGALTEVPVPTRFLFILL
GPKGKAKSYHEIGRSIATLMSDEVFHDIAYKAKDRQDLIAGIDEFLDEVIVLPPGEWDPA
IRIEPPKSLPSSDKRKNMYSGAENIQMNGDTPHDGGHGGGGHGDTEELQRTGRFCGGLVK
DIKRKIPFFASDFYDALNIQALSAILFIYLATVTNAITFGGLLGDATDNMQGVLESFLGT
AVTGAVFCLFAGQPLTILSSTGPVLVFERLLFNFSKDHDFDYLEFRLWIGLWSAFQCLVL
VATDASFLVKYFTRFTEEGFSSLISFIFIYDAFKKMIKLADYYPINSHFKVDYITFYSCV
CMPPEPDNSSVFNETTAAPLDWLTSSSAEKYNNTVDWPSLTKKECWKYGGYLVGNNCNYV
PDITLMSFILFFGTYTCSMALKKFKTSRYFPTTARKLISDFAIILSILIFCGIDALVGVD
TPKLIVPSEFKPTSPHRGWFVPPFGGNPWWVYLAAAIPALLVTILIFMDQQITAVIVNRK
EHKLKKGAGYHLDLFWVAILMIICSFMALPWYVAATVISIAHIDSLKMETETSAPGEQPK
FLGVREQRVTGVIVFILTGVSVFMAPILKFIPMPVLYGVFLYMGVASLNGVQFMDRLKLL
LMPLKHQPDFIYLRHVPLRRVHLFTFLQVVCLALLWILKSTVAAIIFPVMILALVAVRKA
MDYVFSQHDLSFLDDVIPEKDKKKKEDEKKKKKKKGSLDSDNDDEKNHQHSLNAIHHADK
IPFLQSHTMPSPPRTPVKVVPQIRIELEPEDNGYFWRSRGTETTL
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaggcggtgctggacagaggggcttccttccttaagcatgtatgcgacgaa
gaagaagtggaaggccatcacactgtctacatcggggtccacgtgcctaagagctatagg
agaaggagacgccacagaagaagacctgggctaaaggagaagaaggaaagagaaaaaatc
tctgagtactactccgacaaatcagatgtagaaaatgcggatgagacgagcagcggcatc
cttaaaccactcatctcccccgctgccgagcgaatccgcttcattttgggtgaagaagat
gacagccctgcaccccctcagctcttcaccgaactggacgagcttctggctgttgatgga
caagagatggagtggaaggagacggcaaggtggataaagtttgaagagaaagtggaacag
ggcggagagagatggagcaagcctcatgtcgcgacgttgtccctgcacagcttgttcgaa
ctgaggacgtgtatagagaaaggatccatcctgctggatttagaggccacttctctccct
caggtagtggagatggttgttgacaatcaaattgagacgggcctgttgaaactagacatg
aaggacaaggtcacctacacgctgctcaggaagcaccggcaccagaccaagaaatccaac
ctacgctctctggctgacatcgggaagaccgtctccagtgcaagtaggatgtttaccaac
cctgataatgcacgcagcccacttgagagttctgtgccctgcctagcaacccgcacgttg
gatgatgaaatccgagtgcagcgcagccccagcgtgggatggctaagcagtccagccatg
actcatagaaacctgacttccaccagtctgaatgacatctctgacaaacctgacaaagag
cagctgaagaataaatttatgaagaaattgccccgtgatgctgaggcctccaatgtgttg
gttggtgaggtagatttcttggaaaaccctttcattgccttcgtccggctgcagcaggca
gttatgctgggtgctctgactgaagtccctgttcctacccgattcctattcattttgctg
ggtccgaagggaaaagcgaagtcctaccatgagattggtcgatccattgccactttgatg
tccgatgaggtgttccatgacattgcctataaagccaaagacaggcaggacctgatcgct
ggaatcgatgagtttctggatgaagtcattgtgcttccacctggggagtgggaccctgcc
atcaggatagagccccccaaatctctcccatcttctgataaaaggaaaaacatgtattcg
ggtgcggagaacatacagatgaatggagatacgcctcatgatgggggccatggaggtggg
ggccacggtgacactgaagaactacaacgaactggcagattttgtggtggtttagtcaaa
gacataaagaggaaaatacctttcttcgccagtgacttctatgatgctttaaatatccaa
gctctttcagccattctcttcatctacctggccacagtgaccaatgctatcacttttgga
ggtctgcttggtgacgctacagacaacatgcagggcgtgttggagagctttctgggcaca
gcagtcactggagcggtcttttgcctttttgctggtcagccactcacaattctgagcagc
acaggacctgtccttgtctttgaaagactcctgtttaatttcagcaaagaccatgacttt
gattacttggagttccgtctctggattggcctgtggtcagccttccagtgtcttgttctg
gttgctactgatgccagcttcctggtcaaatacttcacccgcttcacagaagagggattt
tcctccctgatcagcttcatcttcatttatgatgctttcaagaagatgatcaagttagca
gactattacccaatcaattcccattttaaagtggactatatcacattttactcctgtgtc
tgcatgccaccagagccagataatagctcagtatttaatgagacgacagcagcgccactt
gattggctgaccagttcctctgctgagaagtacaataacacagtcgactggccatctctg
acaaagaaggagtgctggaaatatggaggctaccttgtgggcaacaactgcaactatgtc
cctgacatcaccctcatgtcttttatcctcttctttggcacctacacgtgctccatggcc
ctgaagaaattcaaaaccagccgttatttcccaaccactgccaggaagctcatcagtgat
tttgcaattatcttgtccattctgattttctgtggaatagatgccctagtaggtgtggat
acaccgaaactaattgtgccaagtgaattcaagccaaccagcccccacagaggctggttc
gtcccacccttcggagggaacccctggtgggtgtaccttgcagcagccatccctgcactg
ctggtgaccattctcatcttcatggaccagcaaatcacagctgtcatcgtcaacaggaaa
gagcacaagctcaagaaaggtgctggctatcatctggatttgttttgggtggctattctg
atgattatatgttccttcatggccctgccctggtacgttgctgctactgtgatctccatt
gcccacatcgatagcttgaagatggagaccgagacctcagcacctggagaacaacccaag
tttctgggagtgagggagcagagagtcactggagtcattgtattcattctcactggtgtg
tcagtctttatggctcccatcttgaagtttataccgatgcctgtgctctatggagtgttc
ctatacatgggtgttgcttcccttaatggagtgcagttcatggatcgtctgaagctgctt
ctgatgcctctgaaacatcagcctgacttcatttatctgcgtcacgtcccgctgcgccgg
gtccacctgttcacgttcctgcaggtggtgtgtctagccctcctctggatcctcaagtca
actgtggctgctataatcttcccagtcatgatcctggcgcttgtggccgtcagaaaagcc
atggactacgtcttctcccagcatgacctcagtttccttgacgacgtcattccagaaaag
gacaagaagaagaaagaggatgagaagaagaagaaaaagaagaagggcagtctggatagt
gacaatgacgatgagaaaaatcaccaacattccttgaacgccatacatcatgctgataaa
attcctttccttcagtcacacactatgccaagccctccacgaactccagtgaaagttgtg
cctcaaattagaatagaacttgagcctgaagacaatggttatttctggaggagcagggga
acagaaactactttgtaa
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