Trachemys scripta elegans (red-eared slider): 117878005
Help
Entry
117878005 CDS
T07347
Symbol
SMAD1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04081
Hormone signaling
tst04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117878005 (SMAD1)
09133 Signaling molecules and interaction
04081 Hormone signaling
117878005 (SMAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
117878005
NCBI-ProteinID:
XP_034627708
LinkDB
All DBs
Position
5:53499315..53570535
Genome browser
AA seq
465 aa
AA seq
DB search
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEV
CINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRNLGQNEPHMPHNATFPDSFQQPN
SHPFPHSPNSSYPNSPGSSNSTYPHSPASSDPGSPFQMPADTPPPAYLPPEDQMTQDGSQ
PMDTNMMAPSIPPEINRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFT
DPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNC
NYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGW
GAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacaagcttattctccttcacaagcccagcagttaagaggctgctgggatgg
aagcaaggggatgaagaagaaaaatgggcagagaaagctgttgatgcattagttaaaaaa
ctaaagaagaaaaaaggtgctatggaggaactggaaaaagcattaagctgtccaggtcag
cccagcaactgtgttacaattccccgttccctggatggcaggcttcaagtttcgcaccgg
aaagggctaccacatgtgatttactgtagagtgtggcgctggccagacctccagagccat
catgaactgaaaccactggaatgctgtgagtttcccttcggttcaaaacagaaggaggtt
tgcatcaatccctaccactacaaacgggtggagagtcctgttcttcctccagtgctggtt
ccaagacacagtgaatacaaccctcagcacagtctcttggctcaattccgcaacttggga
caaaatgagcctcacatgccacacaatgccactttcccggactctttccagcaacccaac
agtcatccattcccccattcccccaatagtagttatcccaactcccctggaagcagcaat
agcacctatccacactctcctgctagctcggatccaggaagtcctttccagatgccagct
gatactccccctcctgcttacctgcctccagaagatcagatgacacaggatggctcacag
ccaatggacaccaacatgatggcaccctcaattcccccagaaataaacagaggagatgtt
caggcagttgcttatgaagagccaaaacactggtgttctattgtctactatgagctgaac
aatcgtgttggggaggcatttcatgcctcctccaccagcgtgttggtagatggttttact
gatccttcaaacaacaagaacagattttgccttgggctgctctctaatgttaaccggaat
tccaccattgagaacaccaggcggcatattggcaaaggagttcacctctattatgttggg
ggagaagtgtatgctgaatgccttagtgacagcagtatttttgttcaaagtcgaaactgc
aactatcaccatgggttccatccaaccacagtttgtaaaattcccagtggctgcagtttg
aaaattttcaacaaccaagagtttgctcagcttctggctcaatcagtgaaccatggcttt
gaaacagtgtatgagcttactaagatgtgcactatccgtatgagttttgtaaagggttgg
ggagccgaatatcatcgccaagatgtaacaagcactccgtgctggattgagatacacctg
catggcccccttcagtggctggataaagttcttactcagatgggctcacctcataatcct
atttcctctgtgtcttaa
DBGET
integrated database retrieval system
