Trachemys scripta elegans (red-eared slider): 117878042
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Entry
117878042 CDS
T07347
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117878042 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117878042 (FIP1L1)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117878042 (FIP1L1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
117878042
NCBI-ProteinID:
XP_034627798
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Position
5:complement(89271585..89347884)
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AA seq
630 aa
AA seq
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MSTGEVERLAADLSGTGGDEEEEWLYGDENEPERPEEQKASAPPPSANEEEAAENGVVKT
KVTEAEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGYGTAPVNLNIKTGGRVYGSSGAKVK
GVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRIRM
GLEILPVTSTTNKIMAEDNSMEVTPGAEVQDGRYNLFKVQQGRTGNMEKEVAVQLTKAEF
TSPPPLFKSVIPTNSYQMVLKSNSAGNSKNLKAFYHSIVDVTDDGSGNVLNHPVPLFPNS
RNSTSSQSQTSTASRKASSGIGKWQERYGRAESPELRRLSGTIDVIGQTITISRVEGRRR
ANENSNIQVLSERSSADVDSFTKPPPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPG
IPITVPPPGFPPPPGGPPPSLIPTIESGHSSGYDSRSARAFPFTFPHLAGSAPSWPSLVD
TSKQWDYYARREKDRERERERDRERDRDRDRDRERERTRERDRERDHSPTPSVFNSDEER
YRYREYAERGYERHRTSREKEERHRERRHREKEETRHKSSRSNSRRRHDSEEGDSHRRHK
HKKSKRSKEGKEASGEPAPEQENTEAAPVE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccggcgaggtggagcggctggcggcggacctgagcgggaccggcggggatgag
gaggaggagtggctctatggcgatgaaaatgaaccagagagaccagaggaacaaaaagct
agtgctccaccaccttctgcaaatgaagaggaagctgctgaaaatggtgtagtgaaaacg
aaggtgacagaggctgaggatgacagtgacagtgacagcgatgatgatgaggatgatgtt
catgtcaccataggagatattaaaacaggagctccacagtatggctatgggacagctcct
gtgaatctcaacatcaagacaggaggtcgagtttatggatcatctggtgcaaaagtcaag
ggagtggatcttgatgcaccaggaagtattaatggtgttccactgctggaagtcgattta
gattcttttgaggataaaccttggcgaaaaccaggtgctgatctttccgattatttcaat
tatgggtttaatgaagatacctggaaagcttactgtgaaaaacaaaagaggatacgaatg
ggacttgaaattttaccagttacctcaactacaaataaaattatggccgaagacaattct
atggaagtaacaccaggtgcagaggttcaagatggcagatacaatctttttaaggtacag
cagggcagaactggaaatatggagaaggaggtggcagtgcaattgaccaaagctgagttt
acatctcctcccccactattcaaatcagtaatcccgacaaacagttatcaaatggtcctg
aagagcaattctgctggcaactcaaaaaacctgaaggcattttatcatagtatcgtagac
gttacagatgatggcagtggaaatgtattgaatcatccagtcccactcttccccaattca
agaaacagcacctcttctcagtcacagacaagcactgcttccagaaaagccagttcaggc
atcgggaagtggcaggagcgatatgggagggccgaatcacctgaattaaggagattgtcc
ggtacaatagatgtgattggacagaccatcactatcagcagagtggaaggaaggcggcgt
gccaatgaaaatagcaacatacaggttctttcagaaagatccagtgctgatgtagacagt
tttaccaagccacctccatttttccctccgggagctccgcctacccaccttccaccacct
cctttcctcccaccccctccaactgtcagtaccgctcctcctctgattcccccaccaggt
ataccaataactgtgccaccaccaggttttcctcccccacctggaggtccgccaccttct
cttataccaacaatagaaagtggacattcctctggctatgacagccgctctgctcgtgca
tttccgttcacctttccgcaccttgcaggttctgctccttcgtggcctagtcttgtggac
accagcaaacagtgggattattatgcacgaagagagaaagatagagaacgagagagagag
agagaccgagagagggatcgtgatcgtgatcgtgatagggaacgagaacgtaccagagag
agagacagggaacgtgatcacagcccaactccaagtgttttcaacagtgatgaagaacga
tataggtatagagaatatgcagaaagaggctatgagcgtcacagaacaagcagagagaaa
gaggaacgacacagagaaaggagacatagagaaaaagaagagaccagacacaaatcatct
cgaagtaacagcaggcgtcgtcatgacagtgaagaaggggacagccacaggaggcataaa
cacaaaaaatccaaaagaagcaaagaaggaaaagaagctagtggtgaacctgcccctgaa
caggaaaacactgaagctgctccagtggaatag
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