Trachemys scripta elegans (red-eared slider): 117878113
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Entry
117878113 CDS
T07347
Symbol
CHRNA9
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-9
KO
K04810
nicotinic acetylcholine receptor alpha-9
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117878113 (CHRNA9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117878113 (CHRNA9)
Ion channels [BR:
tst04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117878113 (CHRNA9)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117878113
NCBI-ProteinID:
XP_034627958
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Position
5:complement(96051367..96060520)
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AA seq
490 aa
AA seq
DB search
MKRNSLPFCCFSLWLVFTAVILQGVESAQGKYAQMLFNELFEDYSNALRPVEDTDKALNV
TLQITLSQIKDMDERNQILTAYLWIRQSWYDAYLKWDKDEYDGLDSIRIPSNLVWRPDIV
LYNKADDDFSEPVNTNVVLRYDGKITWDAPAITKSSCVVDVSYFPFDDQQCNLTFGSWTY
NGNQVDIINALDSGDLSDFIEDVEWEIHGMPAVKNVITYGCCSEPYPDITFTLILKRRSS
FYIFNLLLPCVLISFLAPLGFYLPADSGEKVSLGVTVLLALTVFQLMVAESMPPSENVPL
IGKYYIATMTMITASTALTIIIMNIHHCGAEAQPVPQWARVVILDYMSKIFFVYDVGENC
TSPQRVKTQEHKLRKDFKYQKKQDRHKVVTSQLSRNRNNDSDLKKKLNGHLNNSNGIQCE
NAKDAVNCCSCYKVLIKNIEYIANCVRDHKANRAKGIEWKRVAKVMDRFFMWIFFIMVFF
MSFLIIGKAI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaatagcctgcccttctgctgcttctccctttggttggttttcacagcagtg
atacttcaaggtgtggagtctgcacaaggaaaatatgctcaaatgctattcaatgaactg
tttgaagactactcaaatgctctgagaccagtggaagacacagataaagcactgaatgtc
acccttcagatcacactgtcccaaattaaagatatggatgaaagaaatcaaattttgact
gcgtatttatggattcgacaaagttggtatgatgcatatctcaagtgggacaaagatgaa
tatgatgggttggattctatcaggattcctagcaacctggtatggagaccagacattgtc
ctgtataataaggctgatgatgacttttcagaaccagtgaacacaaatgtagtattgaga
tatgatggaaaaattacttgggacgcaccggctataacaaagagctcatgtgtggtggat
gtttcttattttccctttgatgaccagcagtgtaaccttacctttggttcctggacctac
aatggtaatcaggtagacataatcaatgctttggacagtggagatctatctgactttata
gaagatgtggagtgggagattcatgggatgccagctgttaagaatgtaatcacgtacggc
tgctgctctgagccgtatccagatattacattcacactgatcttgaaaaggaggtcttcc
ttctatatatttaacctgctcctcccttgtgttttgatctctttcctggctccactggga
ttctaccttcctgcagactctggggaaaaagtgtcacttggtgttacagttctgcttgct
ctcactgtatttcagctaatggttgcagagagcatgcctccttctgaaaatgtgcccttg
ataggcaaatattacatagcaactatgacaatgatcacagcatccactgcactgaccatc
attataatgaatatccaccactgtggagcagaagcccaacctgttccacaatgggccagg
gtggttattttggactacatgtcaaagatcttttttgtttatgatgtgggtgaaaattgt
acaagtccacaaagagtaaaaacacaagaacataaattaaggaaggattttaagtatcag
aaaaagcaggacagacacaaagtggtgaccagtcaactttccaggaatagaaacaatgac
agtgacctaaagaagaagctgaatggacatttaaataacagtaatggaattcaatgtgaa
aatgctaaggatgcagttaactgctgctcctgttataaagtactgataaagaatattgag
tatattgctaattgcgttagagaccacaaagcaaaccgcgctaaaggaattgagtggaaa
agggtagcaaaagtgatggacagattcttcatgtggattttttttattatggtctttttc
atgagtttcctgattattggcaaagcaatttaa
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