Trachemys scripta elegans (red-eared slider): 117878206
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Entry
117878206 CDS
T07347
Symbol
CENPC
Name
(RefSeq) centromere protein C isoform X1
KO
K11497
centromere protein C
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117878206 (CENPC)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
Centromere proteins
117878206 (CENPC)
Mis6 complex
117878206 (CENPC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CENP-C_C
Cupin_2
CENP-C_mid
Cupin_3
Motif
Other DBs
NCBI-GeneID:
117878206
NCBI-ProteinID:
XP_034628167
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All DBs
Position
5:complement(7979012..8024988)
Genome browser
AA seq
695 aa
AA seq
DB search
MENECEFLIDESDGFSFTSWFSIPKKNKKIEKQALSKPEPQSQPSEKKKAVVQESKKRKD
RKAQNEVPVKLTRMEQSKMKTCDAVERIQAELQNASDTNLGLADKKREALKSVRQSSPHV
EESKKHTHGQRSTRTPNKKNSTAQKQIQPKKFTFSVSKSDTDISDTEQPKPTEIPNGDPF
GSCSMTEQPQEKVVFSEEDHNFPKPPQSILKTALRSSHKKQTAKQKLSKIASSKKLVENR
RNKVRKSTLKSSSRKSRIQISEESSESESIEEVAERELLKSNKVFSPSLQQESPTSALQK
SHKSPKPKNFIHSLESSGNVHIKTPAKSKKPSQIFIDNTEDSEGKRASAKSLRRTATRIN
QRTNMIDCSNPENAEPGNTTDHKGSSGQDMAEQNHKKSNASVKTKYKKQSNLHRSQVSPA
PEKNKNHNSGLVLKRYVKFTSKNDEPIACEWDDSSSDKSIALKGDASEFLSNTPLKHKLV
MPSQTPNVRRTKRIRLKPLEYWRGERVNYMMRPSGGFVVGGIVSPEKDPCKKASVKRKHT
PKTRHHVVEYLNVSLADTSKPTAVWDPTINEEVLLECVNTGRNHSCFFNDESVEIYKNLN
TSVFAAGKLILKPLKEKGHQFVYTDNIAFHVIRGKIIFTLHKTSYYLTTGDFFYVPEGNG
YNIRNLLNEESILLFTQLKGERPIIERSLNESSSP
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgagtgtgagtttttaattgacgaatcggatggtttttcttttacatcctgg
ttttcaattcccaaaaagaacaaaaaaatagagaagcaggccttatcaaagcctgagcca
caatctcagccttccgaaaagaaaaaggcagttgtacaagaaagcaagaaacgcaaggat
agaaaggcacagaatgaagtacctgttaaactgactcgtatggaacagtcgaaaatgaaa
acatgtgacgctgttgaacggatacaagccgagttacaaaatgcttcggatacaaatcta
ggtttagctgacaaaaagagagaggctcttaaatctgtaaggcaaagcagtcctcacgtg
gaagagagtaaaaaacacacacacggacaaagatccacaagaaccccaaacaagaaaaac
tccacggcccagaaacagatacagcccaaaaaattcactttttcagtttccaaatcagac
acagatatttccgatacagaacaacctaaaccaacagaaatacctaatggagatcccttt
ggatcttgtagtatgactgagcagcctcaagagaaagttgtgttttcagaagaggatcat
aattttccaaaacctccccagtccattttaaaaactgctctacgttcatcccacaagaaa
caaactgctaagcagaaactttcaaaaattgcatcgtctaaaaaactggtagaaaaccga
agaaacaaagttagaaaatctacccttaaatccagtagtagaaaatccaggatacaaatc
tcagaggagagttctgaaagtgagtccatagaggaggtggctgaaagagagcttttaaag
tcaaacaaagtgttttccccttcattgcaacaggaatcaccgacttctgcattacagaag
tcccataaatcccccaaacctaaaaacttcatacattcactggaatcatctggtaatgta
catatcaaaactcctgcaaaatctaaaaaaccttcacagattttcatagacaatacagaa
gactctgaggggaaaagagcatcagctaaatctctacggaggacagctactcggattaat
caaagaactaatatgattgattgttcaaatcctgaaaatgctgaacctgggaatacaaca
gatcacaagggttcttctggccaggacatggcagaacaaaaccacaagaagtcaaatgca
tctgtgaaaacaaaatataaaaaacagagtaatctccaccgatcacaagtctctcctgca
cctgagaaaaacaagaatcataacagtgggcttgtactgaaacgttatgtaaaatttact
tcaaaaaatgacgagcctattgcgtgtgagtgggacgattcatcttcagataaatctata
gccttgaagggtgatgcaagtgaatttttgtcaaacacaccactaaagcataaactagta
atgccatcccaaacacccaatgttcgtcggacaaaaagaatacgactaaagcctttggag
tattggcgaggggagcgcgtgaactatatgatgagaccttcaggagggtttgtggtaggt
ggaatagtgtctcctgaaaaggatccatgcaagaaggctagcgtaaagagaaaacatacg
ccaaaaacaaggcatcatgttgttgaatatttgaatgtctccctagcagatacttctaag
ccaactgctgtatgggacccaacaattaatgaagaggttttgctagagtgtgtcaacact
ggacgtaatcattcttgtttctttaatgatgagtcagtggaaatatataaaaacctgaat
acatccgtttttgctgctggtaaattgatcttgaaaccgcttaaagaaaaggggcaccaa
tttgtttacacagataatatagctttccatgttatccgtggcaagattatttttaccctt
cataagacatcctactatctaactacaggagattttttctatgttccagaaggaaatgga
tacaacatacgcaatctcctgaatgaggaaagtattcttcttttcacacagctgaaagga
gaaaggccaattatagaacgttcattaaatgagtcctcttccccatag
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