Trachemys scripta elegans (red-eared slider): 117878215
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Entry
117878215 CDS
T07347
Symbol
HPSE
Name
(RefSeq) heparanase
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00531
Glycosaminoglycan degradation
tst01100
Metabolic pathways
Module
tst_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117878215 (HPSE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117878215 (HPSE)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
117878215 (HPSE)
Glycosaminoglycan binding proteins [BR:
tst00536
]
Heparan sulfate / Heparin
Enzymes
117878215 (HPSE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
117878215
NCBI-ProteinID:
XP_034628179
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All DBs
Position
5:25683705..25709176
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AA seq
529 aa
AA seq
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MLRRLLLWGVLLAGAAAAGSAVAVLSAELRGQPAREVSPAFLSLTIDANLAADPRFIPIL
GSPKLRTLARALSPGFLRFGGTRTDFLIFSPEKDSTLEDRDFWESQVNQGICGVRSIPTA
VEELLLSQWPIQENILLKEQYWKKYKNTTITKSTVDILYSFAKCSKLDLIFGLNALLRKR
GLQWDSSNAQLLLDYCASQHYNMSWELGNEPNSFRKKSGIYIDGSQLGQDFIHLYHLLRN
YSSFKNSKLYGPDVGQPRKNTQKLLKSFLKSGGKVIDSVTWHHYYVNGRHATREDFLSPE
VLETFITAVKDVLQIVDGTVPGKKVWLGETSSAYGGGAPRLSNTYVAGFMWLDKLGLSAR
MGIDVVMRQVFYGAGTYHLVDANFEPLPDYWLSLLYKKLVGTKVLKVGLKGADPKKLRVY
LHCMNNHNPMYKEGDVTLFLLNLYNVTKHVQLPHNLYNKHIDEYLLLPHGEQHILSRSVQ
LNGHVLRMVDNKTLPALTKKPLSPGSTLGLPAFSYGFYVIKNAKAIACI
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcggttgctgctctggggggtgctgctggccggggcggcggcggcgggctcg
gcggtggcggtgctgagcgcggagctgcgcggccagccggcgcgggaggtaagcccggct
ttcctctccctcaccatcgatgccaacctggccgcggaccccaggttcatccccatcctg
ggctctcccaaactgcgcactttagcaagagctttgtctccaggcttcttgagatttggt
ggcaccagaactgatttcctgatcttcagtccagagaaggattcaactttagaagacaga
gacttttgggaatcacaggtgaatcaaggtatttgtggagtaagatctattcctactgct
gtggaggagctactgctatctcagtggcccatccaggagaatatactccttaaggaacaa
tactggaaaaaatacaaaaacaccaccattacaaaaagtacagtggacattctgtatagc
tttgcaaagtgttcaaagctggatctaatctttggccttaatgccttacttcgaaaacgt
ggcttgcagtgggatagttcaaatgctcagttgctcttggattattgtgcttcccaacat
tacaacatgtcttgggaacttgggaacgagccaaacagtttcaggaagaaatctggcatc
tatattgatggttcccaacttgggcaagactttattcatctgtatcaccttctgagaaac
tacagcagtttcaagaattcaaaactttatgggcctgatgttggtcaaccacggaaaaac
actcagaagttgttgaagagcttcctgaaatcaggagggaaagtaattgattctgttacc
tggcatcattactacgtaaatggacgacacgctaccagagaggatttcttgagccctgaa
gtgctggaaacctttattacagcagtaaaagatgttcttcagattgttgatggaactgta
cctggtaaaaaggtgtggctaggagaaacaagttcagcctatggaggtggagctcccaga
ctgtctaatacatatgttgccggttttatgtggttggacaaattaggactgtcagccaga
atgggtattgatgtggtgatgcgacaagtgttctatggagcaggaacctatcacctggtg
gatgcaaattttgaacctttgcctgactattggctttctctgctgtacaaaaaactggtc
ggcaccaaggtactgaaagttggcctgaagggagcagatccgaagaagcttcgagtgtac
cttcattgcatgaataaccacaacccaatgtacaaagaaggggatgttactctgtttctt
ttaaacctctataatgttaccaaacatgtgcagttgccccataacttatataataagcat
atagatgaataccttttattacctcatggggaacagcacatactttccaggtctgttcag
ttgaatggtcatgtcttaaggatggtggataacaaaacactgccagcacttactaagaaa
cccctctctcccgggagtactcttggccttccagctttttcatatggattttatgtaata
aaaaatgcaaaagctattgcttgcatttaa
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