Trachemys scripta elegans (red-eared slider): 117878231
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Entry
117878231 CDS
T07347
Symbol
HERC3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117878231 (HERC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117878231 (HERC3)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117878231 (HERC3)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
HECT type E3
117878231 (HERC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
117878231
NCBI-ProteinID:
XP_034628213
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All DBs
Position
5:complement(22700511..22843601)
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AA seq
1051 aa
AA seq
DB search
MLCWGCWSFGQPGIGSNLQAIIPEPQVYGFIHDRNIKEVACGGNHSVFLLENGEVYTCGL
NTKGQLGHQREGSKPEQIGALADQHIVHVACGESHSVALSDQGQLFAWGAGSDGQLGVTT
TEDSVAVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNDYGQLGLGKECPSQTS
PQRVTSLDGIPLAQVAAGGAHSFALSLSGAVFGWGRNNSGQLGLSDEQDRESPCHVKLLR
TQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRQHTLALVPSSGLIYAFGCGTKGQLGTGHICNVKCPSPVKGHWVAHNGQLSGRADAFK
YHIVKHIFCGGDRTFVLCSKSENSLPADDFRTINQLRYTCLINDETIDVWKQKLLERNNS
NSVNSEVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSILL
DQILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPLFQDSKHYITLTLPLAMAILRLDTN
PSKVLDNWWSQVCPRYFLRLVNLYKGAVVYLLNGRKTLLIPVLFSSYITAALRLLEKLHK
VNLKVKHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFIFDA
QAKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALREL
SIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPESNLLWFSD
TCFVEHNWFHLIGIVCGLAIYNFTVVDLHFPLALYKKLLNVKPCLEDLKELSPTEGRSLQ
QLLDYPGDDVEETFCLNFTICRESYGVTEQKKLIPEGDKITVQKDNRQEFVEAYLNYIFN
LSVHEWYIAFSTGFLKVCGGKVLELFQPSELRAMIVGNSNYNWEELEECAIYKGDYSATH
PTVRMFWEIFHEFPLEKKKKFLLFLTGSDRIPIYGMSSLRIIIQSTSSGDQYLPVAHTCY
NLLDLPKYSSKKTLSVRLTQAIDHYEGFSLA
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgttatgttggggatgttggtcttttggccagcctgggataggtagcaatctccaagca
atcatccctgagccacaggtgtatggattcattcacgaccgaaacatcaaggaggtggct
tgtggaggaaaccattctgttttcttactggagaatggagaagtttacacctgtggtttg
aacaccaaaggacagctaggccatcagagagaaggaagcaagccagagcaaattggagca
ttggcagatcagcacatagtccatgttgcctgcggagagtctcacagtgtggcactcagt
gaccagggccagctctttgcctggggcgcaggtagtgatggacagctgggagtcactact
acagaagattctgtggcagtaccaaggttaataaagaaactgaaccaacagacgatactg
caggtttcctgtggcaattggcattgcctagctctcgcggcagacggccagttcttcaca
tggggacagaacgactatggccagctgggcctgggtaaagaatgcccctctcaaaccagc
ccgcagcgcgtcacatctctcgatgggatccccttggctcaggttgctgccggtggagct
cacagctttgccctgtctctctccggagctgtgtttggctgggggaggaacaactcagga
cagctgggcttaagtgacgagcaagaccgagagtccccttgccatgtgaagctcttacgg
actcagaaggtcgtctatatcagctgtggagaagaacatacagcagttctgacaaagaat
ggaggtgtgttcacgtttggtgctggttcctgtgggcagcttggccacgattccatgaat
gatgaggttaacccccggagggttctggagctaatgggcagcgaagtgtcccagatcgct
tgtggcagacagcacactctagcccttgtgccttcttcaggactgatctatgcattcggc
tgcggaacaaaaggccagctgggaactggacacatatgcaacgttaaatgcccatctcca
gtgaaaggtcactgggtggctcacaatgggcagctctcaggtagagcggatgcctttaaa
tatcacattgttaaacacatcttctgtggaggagaccggacttttgtactttgctccaaa
tctgagaattctttgcctgctgatgatttccggaccataaatcaattacgttacacttgt
ttaataaatgatgaaactatagacgtttggaaacaaaagctattagaacggaacaactct
aattcggtcaacagtgaagttgtgcagatattgtcgtcggctgcctgttggaatggaagc
ttcctggagaagaaaatcgatgaacattttaaaaccagccccaaaatcccaggaattgac
ctgaattccaccagagtgttgtttgagaagctaatgaactcgcagcattccatcctgcta
gaccagatcttaaaaagctttgaaagctttttgattccccagctgtccagctccccacca
gatgttgaggcaatgagaatctacctgattctccctgaattccccctgtttcaagactct
aagcattacataacgttaacgcttcctctagcgatggccattctgcgactggataccaac
cccagcaaagtattagataactggtggtctcaagtatgcccaaggtatttcctgaggtta
gtgaacctctataaaggcgcagtagtttatctcctgaatggaagaaaaacattattgatc
cctgtcctgttcagtagttatattacagctgccctcagactgctagagaaacttcacaag
gtgaatctgaaagttaaacatgtggaatatgacacgttttatatcccagagatttccaac
ctggtggacattcaagaagactatcttatgtggttcttgcatcaagcaggaatgaaagta
agaccatctatcatgcaggatgctgtgacactctgttcttatcctttcatcttcgatgct
caagccaagaccaaaatgttacagacggatgctgaactacagatgcaggtggcgatcaat
ggagcgaatttgcaaaatgttttcatgcttctcactctggagcctctgctggccagaagc
cctttcctagttcttcatgtccgcaggagcaacttggttggcgatgctttgagggagctg
agcattcattcagatattgatttgaaaaagcctctgaaagtgatctttgatggcgaggag
gctgttgatgctggaggggtcacaaaggaattctttctcttgttgctaaaagaactcctg
aatcccatctatggaatgttcacctactatccagaatcgaacctgctgtggttttcagat
acgtgttttgtagagcacaactggtttcatttgattggcatagtatgtggacttgctata
tacaacttcactgtggtagacctccatttcccgttggcgctgtacaaaaagttattgaat
gtgaagccctgcttagaagacttaaaggagctgtcccctacggaaggaaggagtcttcag
cagcttttagattatcctggggatgatgtagaagaaacgttctgcctgaactttacaata
tgcagagaaagctacggtgtgacagagcagaagaagctaataccagaaggagacaaaatt
actgtgcagaaggacaataggcaggaatttgttgaggcttacttgaattacatcttcaat
ctctcagtccatgagtggtatatcgctttctccaccggcttcctgaaggtgtgtggtggg
aaggtcctggaactcttccagccctcagagctgagggccatgatagtagggaacagcaac
tacaactgggaggaactggaagagtgtgccatctacaagggggactactctgctacacac
ccaacagtgagaatgttctgggaaatctttcatgaatttcccttggaaaagaagaagaaa
tttcttttgttcctgactggcagcgaccgcatccctatctatggcatgtcaagtttacgc
atcatcatccagtccacatcgagtggggatcagtacctgcccgtagctcacacctgctac
aacctcctcgacctgcccaagtacagcagcaagaagaccctcagcgtgcggcttacacaa
gccatcgaccactacgagggctttagtttggcctga
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integrated database retrieval system
