Trachemys scripta elegans (red-eared slider): 117878366
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Entry
117878366 CDS
T07347
Symbol
POLN
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117878366 (POLN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117878366 (POLN)
Enzymes [BR:
tst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117878366 (POLN)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
117878366 (POLN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
117878366
NCBI-ProteinID:
XP_034628430
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All DBs
Position
5:121376001..121577008
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AA seq
626 aa
AA seq
DB search
MTPRNTGLVSSVRGIVVLIKKQTDQLCPSKGSSIVNPIVWDACTRNDKCIYLKIEHSSVW
EQQEQTHKKYIREILFQILHCTIICFNAKDFLRTLLHVYGDDINWKQVADCVVLDPRIAA
WLINPSDTVPSFEYLIHKHFENPVSERTVNMNADSLRNTLHQNLVLNLKILYSIMMELAG
ELQVQGLWKLFCTLELPLIKILAVMETHKIHVNKEELKRTSEILGLRLKELEQEAHRAAG
QQFLLTSSSQLREVLFEKLKLHMLCEKVPRTEMQHLQSTSEVVLNKLQDLHPLPKIILEY
RQVHKIKSTYVDGLLSCMKKGFISSTWNQTGTVTGRLSAKHPNIQGISKHPVQIIKKQYV
KGKENEIVTISPRTLFVSAKGYTFLAADFSHIELRILAHLSCDPELLKLFQEPETTDVFT
TLASQWRSIPSEQVKHADREQAKRVVYSVVYGAGKERLAGCLGITPLQAGQFIESFLMKY
KKIHDFTKKTIEQCHKEGYVVSIMGRKRHLPNINARDYRLRTQAERQAVNFVVQGSAADL
CKMAMVEIFTSVAISPTLTARFIAQIHDELLFEVEDSQIEEFSALVKRTMESLQQIKALD
MPLKVPLKVILTTGKSWGCMTELQEM
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgacccctagaaatactggcctagtctcatcagtaagaggaattgttgtgttaataaag
aaacagacagaccaactttgtccttcgaaaggctcttcaattgttaatccaattgtttgg
gatgcctgtaccagaaatgataagtgtatttatttaaaaatagagcactcttctgtttgg
gagcaacaggaacagactcataagaagtacatcagggaaatactatttcaaatactacac
tgtactattatttgcttcaatgcaaaggattttttgagaacactgcttcatgtttatggt
gatgatattaactggaaacaagtggctgattgtgttgtgttagatccaaggattgctgca
tggctgataaaccccagtgacactgtcccctcttttgaatatttgatacataagcatttt
gaaaatcctgtctcagagagaacagtgaatatgaatgcagattccttgagaaatacattg
caccagaacttggttctaaacttgaagatactttacagtataatgatggagctggctggt
gaattacaggttcaaggcttgtggaaactcttttgcactttggagcttcccttgataaaa
attttggcagtgatggaaacccataaaatacatgtgaataaagaagaactaaaaagaaca
tcagagattctagggttgagattgaaagagcttgagcaggaagcccatcgagctgctgga
caacaattcctattgaccagcagtagtcagctgagagaggtactgttcgaaaaactaaag
ctccatatgctgtgtgagaaagttcccagaactgagatgcagcatcttcaatccacttct
gaagttgtgttaaacaagctgcaagatcttcatccattgcctaagataattttagaatac
cgacaggttcacaagataaagtcaacctatgtggatggactactttcatgcatgaaaaag
ggatttatttcatctacatggaatcagacaggaactgtgactggcagactttcagccaag
catcctaatatccaaggtatatccaagcatccagttcaaattattaagaagcaatatgta
aaaggaaaagaaaatgaaatagtaactatttccccaagaacattgtttgtttcagctaaa
ggatatacgttcttagcagcagatttttcccatattgaactaagaatccttgcacaccta
tcctgtgacccagaacttctgaaactgttccaagaacctgaaaccactgatgtgtttact
acactggcttctcaatggaggagtattccaagtgaacaagtgaagcatgcagatagagaa
caggcaaagcgcgttgtctactcagtagtttatggagcaggtaaagaacgtcttgctgga
tgtttgggaattactcctcttcaagctggtcaatttatagagagttttctgatgaaatac
aagaaaattcatgactttacaaagaaaaccattgagcaatgccacaaggaaggatatgtg
gtttccatcatgggacgtaaaagacacttgcctaatatcaatgctcgagactacagacta
cgtactcaagcagagaggcaggctgtcaactttgttgtccaaggatctgcagctgacctt
tgtaaaatggctatggttgagatttttacctccgttgctatttctccaactttaacagcc
aggtttattgcccaaattcatgatgaattgttgtttgaagtggaagattctcaaattgag
gaattttcagcacttgtaaaaagaacaatggaatccctgcagcaaatcaaagccttagac
atgcccctaaaggtccccttgaaagtgattcttaccactggaaagtcatggggttgcatg
acagaattacaggagatgtaa
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