Trachemys scripta elegans (red-eared slider): 117878390
Help
Entry
117878390 CDS
T07347
Symbol
DYSF
Name
(RefSeq) dysferlin
KO
K18261
dysferlin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117878390 (DYSF)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117878390 (DYSF)
Membrane trafficking [BR:
tst04131
]
Endosome - Lysosome transport
Others
Ferlins
117878390 (DYSF)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117878390 (DYSF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
Pex24p
PTEN_C2
DUF3382
Motif
Other DBs
NCBI-GeneID:
117878390
NCBI-ProteinID:
XP_034628445
LinkDB
All DBs
Position
5:complement(136730404..137005542)
Genome browser
AA seq
2121 aa
AA seq
DB search
MLRCLLLGASSLPNLEKRDRQSDPVASLTFRAPAVLQYRDSEQRTKPCMISGLTPAPGGD
RSARGFDWDLKGIPLDQNAELTVVVKDHETVGRNRFLGEARVPLQDVLGSPTLTASFNAP
LLDTKRQSTGAFLNLQVSYIPPPGAAPLFPPPTPPEPTPSTAELDTVTDTAGEEDTEDQI
VTGDETEPSTGPSGSEQPTLPRKPPSHHVHGIKRRKSAPKKLLSNKPQDFQIRVRVIEGR
QLPGVNIKSVVKVTVAGQTKRTRIRKGNGPFFDEIFFFNVFESPAELFDEPIFITVVDSR
SLRTDSVIGEFRLDVGTVYAEPKHALLRKWLLLSDSEDFSAGAKGYVKVSLFVLGPGDEA
PLEKKEVAEEKEDIEGNLLRPTGVTLRGAHFCLKIYRAEDLPQMDDAIIDNVKQIFGFES
NKKNLVDPFVEVSFAGRTISSKILEKNANPQWNQRITVPAMFPSMCEKMRIRVMDWDRVT
HNDVIGTTHLRMSQISAPGGELEDEFPVLTKPLKATAMDDGLGFLPTFGPCYVNLYGSPR
EFTGFPDPYEELNMGKGEGVAFRGRLLMELETKLVEHIEQKLEDIPPDDILRLEKHLRRR
KYCLFAAFYSASMLQDVDAAVQFEVSIGNYGNKFDNTCLPLASATQYSGAVFDGCQYYYL
PWGNVKPVVVLSSYWEDISHRTDMQNLLQRTADRLEAALRQVVSAIASQCTANVGLFLCA
PFSHTPICSQPLVDVSDKTASTHLDQNMYKFRSTNLHQIVQAALNLKHEDSDLQTVLDQA
EDWLLRLKAMAEEPQNSLPDIVIWMLRGDKRVAYARVPAHEVLFSRTGANCCGKNCGKLQ
TIFLKYPQEEAMGPRIPAQVRVQLWFGLAVDEKEFNKYAEGKLSVFAETYENQVKLALVG
NWGTTGLTYPKYSDVTGKIKLPKDSFRPSVGWTWAGDWFISPEKTLLYDTDAGHMSFVEE
VFENQVRLPGGQWIHMADAYTDVNGEKVLPKEEIECPPGWKWEDVEWDTDLNRAVDERGW
EYGIAIPPDRKPKAWVPAEKMYHTSRRRRWVRLRRRDLKQMEALKKHKQEELEGEGWEYA
SLFGWKFHLNYRKTDTFRRRRWRRRMEPLERTGAAAVFALEGALGGVTDDKSDDGKSVST
LSFGVNRPTISCIFDYGSRYHLRCYIYQARDLIAMDKDSFSDPYAIVSFLHQSQKTVVVK
NTLNPLWDQTLIFYEIEIFGDPQNVADIPPNIVVEIYDHDTYGADEFMGRCICKPSLERF
PRLSWHPVARGNRKAGELLAAFELIQREKPAVHHLPGFESELSASLDELGTPAFFYEGLL
QWSADSDLPYPPPQREPNIYMVPQGIKPVLQRTAIEILAWGLRNLKSYQLASITSPSLQV
ECGGQMVQSCVIKNVRKNPNFDICVLFMEVRLPKEALYCPPVIIKVIDNRQFGRKPVVGQ
CTIRSLEEFYCDPYREETDTPEEQPDEVSLTPRDDVLIDIDDKEPLIPVQLAEGMTSSAL
INMPASRADLHEEEFIDWWSKFYASTGEREKCGGYLEKGFDTLKVYETELENMEEFERLS
DFCHTFKLYRGRTQDANEDPSVVGEFKGSFKMYPLPDDPRVPVPPRQFHQLPAKGPQECL
IRIYIIRAFDLQPKDSNGKCDPYVKISVGKKSINDQDNYIPCTLEPVFGKMFELTCTLPL
EKDLKVTLYDYDLLSKDEKIGETVIDLENRFLSKFGARCGLPQTYCISGPNQWRDQLRPS
QLLHLFSLQRNCKAPIYKPDRVIFREQEYVLSEFEDGKPVNPHLGVPEERLALYALRKQG
LVPEHVETRPLYSPLQPEIEQGKLQMWVDLFPKSLGLPGPPFNITPRRAKRFFLRCIIWN
TKDVILDDLSITGEKMSDIYVKGWMIGHEENKQKTDVHYRSMGGEGNFNWRFVFPFDYLP
AEQVCHIAKKEHFWSLDKTDNKVPPQLILQIWDNDKFSFDDYLGSVQMDLNRMPAPAKTA
EKCSLNLLDETLSSDRFVSLFEQKAVKGWWPCVVEAEEKKTIAGKLEMTLEIVTEQEQEE
RPAGTGRDEPNMNPKLEDPKRPETSFLWFTSPYKTMKYILWRRFKWVFLIAVVVFILLLF
IGIFIYAFPNYAAMKLVKPFS
NT seq
6366 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcctgctgctcggagcctccagcctccccaacctggagaagcgggacagg
cagagcgaccccgtggccagcctgactttccgagcccccgctgtgctccaataccgggac
agtgagcagcggacaaaaccctgcatgattagtggcctgaccccagcccccgggggggat
cggagcgccagggggtttgactgggatctgaaaggaattcccttagaccagaatgccgag
ctcactgttgtcgtcaaagatcatgagactgttggaagaaacaggtttttgggggaagcc
cgagtgcccctgcaggacgtcctgggctctcccaccctgactgccagctttaacgccccc
ctgctggacaccaagaggcagagcactggggccttcctcaacctgcaggtttcctacatt
cctccacctggggccgctcctctgttcccgccgcctacccctccggagccaacaccatcc
acagctgagctcgacaccgtcaccgatacagccggggaggaagacaccgaagaccagata
gtgacaggggatgagacggagccttccacagggccctctgggtcggagcagcccacgctc
ccccggaagcctccttcacaccacgtccatgggattaagaggaggaaaagcgccccgaaa
aagctgctgtccaacaaaccgcaggacttccagatcagggtgcgagtcatagagggcagg
cagcttcccggtgtcaacatcaaatcggtggtgaaagtgacggttgccggacagacgaaa
agaactaggatccgcaaagggaatggcccgttcttcgacgagatctttttcttcaatgtc
tttgaatctccggctgagctgtttgatgagcccatattcatcacggttgttgattcccgg
tctctccggacagactctgtgattggggaatttcggctggatgtcgggacagtttatgca
gaaccaaagcacgccttgctcaggaaatggctgctcctttctgactcagaagacttttct
gctggggccaaaggttacgtgaaagtcagcctgtttgtgctgggacctggcgacgaagct
cccctggagaagaaagaagtcgctgaagagaaggaagatattgaggggaatcttctgcgc
ccaactggggtcacgctgaggggggctcacttctgcctgaaaatttacagagctgaagac
ttgccccagatggacgatgccatcatcgacaacgtcaagcagatcttcggctttgagagc
aacaagaagaacctggtcgatccatttgtggaagtcagctttgccggcagaacgatcagc
tctaagatcctggagaagaacgccaacccccagtggaaccagcgcatcaccgtgccagcc
atgtttccttccatgtgtgagaaaatgaggatccgggtcatggattgggaccgtgtcact
cacaacgatgtcattggcacaacccacctgcgcatgtctcaaatctccgccccgggagga
gagctggaagatgagtttcctgttctcacgaagcccctgaaagctacagccatggacgac
gggctgggattcctgccaacgtttgggccctgttacgtaaacctttacggcagcccgagg
gaatttaccgggtttccagatccctacgaggaactcaacatgggaaagggagagggagtg
gcctttcggggcaggttgctgatggagctggagacaaaactggtggaacatattgagcag
aagttggaggacatcccgcctgacgatattctacggctagagaagcacctgcggcggcgc
aagtactgcctcttcgccgccttctactcggccagcatgcttcaggacgtcgacgccgcc
gtccagttcgaagtcagcatcggcaactacggcaacaagtttgacaacacgtgcctgccg
ctggcctccgccacgcagtacagcggggctgtgtttgacggttgccagtattactacctc
ccctggggcaatgtgaagcccgtggtggtgctgtcgtcctactgggaggatatcagccac
agaacggacatgcagaaccttctccaacgcactgcagacaggctggaggctgcactcaga
caggtggtaagtgccattgcttcgcaatgcacagctaacgttggcctgtttctctgtgct
cctttctcccacacccccatctgcagccagccgctagtcgatgtcagcgacaagacagcc
agcacccatctggatcagaacatgtacaaattccgcagcaccaacctgcaccagattgtc
caggcagctctgaacctgaagcacgaggattctgacctccagacagtgctggaccaggct
gaggactggctcttgaggctaaaagccatggcagaggagccccagaacagcctgccagac
atagtgatctggatgcttcgaggagacaagcgtgtggcttacgcccgggtgccagcccat
gaagtgcttttctccaggaccggcgccaactgctgtggcaagaactgtgggaaacttcag
acgatatttttgaaatacccacaggaagaggccatgggccccaggatcccggcccaggtg
cgggttcagctctggtttgggctggctgtagacgagaaggagtttaacaagtacgcggaa
gggaagctctccgtctttgcagaaacctatgagaaccaggtgaagctggcgctggttggg
aactgggggacgactggcctgacctaccccaaatacagtgacgtgaccggcaaaatcaaa
ctgcctaaggacagtttccgtccctccgtcggctggacgtgggccggggactggttcatc
agcccggagaagacgttactttacgacacggacgccggtcacatgagctttgtagaggaa
gtgtttgagaatcaagtccggcttcctggaggccagtggatccacatggctgacgcctac
acggatgtgaacggggagaaagtgcttcctaaggaggagatcgagtgtcccccaggatgg
aaatgggaagacgtggaatgggacacggatctcaaccgagcggttgatgagagaggctgg
gagtacggcatcgctatcccgccagaccgcaagcccaaggcctgggtgccggcagagaag
atgtaccacactagccggcgccggcggtgggtgcggctccgcaggagggaccttaagcag
atggaggctctgaaaaagcacaagcaggaggagttggaaggtgagggctgggaatacgcc
tctctctttggctggaagttccacctgaactaccgcaagacggacaccttccgccgccgt
cgctggaggcgccgcatggagccgctggagcgcaccggagcggccgctgtctttgccctg
gagggcgctttgggaggcgtgacagacgacaagagcgacgatggcaaatcggtttcgacc
ttgagcttcggcgtcaacagacccaccatctcctgcatatttgactatggaagcagatac
cacctgcgttgctacatataccaagctcgggatctgatcgccatggacaaggacagtttt
tcggatccgtacgccatcgtctccttcctccaccaaagccagaagacggtggtggtgaag
aacaccttgaatcccctctgggaccagactctcatcttctacgagattgagatctttggg
gatccccagaatgttgctgacatcccccccaacatcgttgtggagatttacgaccacgac
acctatggtgcggacgagttcatgggccgctgcatttgcaaacccagcttggagcgcttc
ccgagactgtcctggcaccctgtcgctagagggaacagaaaggcaggagagctgctcgcc
gctttcgaactgattcagagagagaagccggctgttcaccatctccctggcttcgagagc
gagctgtccgccagtctggatgagctgggcacacctgccttcttctacgaagggctcctg
caatggtctgcagactcggacctgccctaccctccgccccagcgggagcccaacatttac
atggtcccgcaagggatcaaaccggtgctccagcgcaccgccatcgagatcttggcctgg
gggctgaggaacctgaagagctatcagctggccagcatcacctcccccagcctccaggtg
gagtgcggaggccagatggttcagtcctgcgtcatcaagaacgtcaggaagaaccccaac
ttcgacatctgcgtgctcttcatggaagtgcgcctacccaaggaagctctgtactgccct
cctgtcatcatcaaagtcatcgacaacaggcagtttggccgaaagcccgtggtgggccag
tgtaccatccggtccctcgaggagttctactgcgacccgtacagagaggaaaccgacacc
cccgaggaacagccagatgaggtgagcctcacccccagagacgacgtcctcattgatatt
gacgacaaggagcctctgattcctgtccagcttgcagagggcatgaccagctccgctcta
attaacatgccagcttctcgggccgatctccatgaggaagagttcatcgactggtggagc
aagttctacgcttcgacgggggagagagagaaatgcggcggctacttagagaagggcttt
gacacactgaaggtctacgagacggagctggagaatatggaggaatttgagaggctctcc
gacttctgccacaccttcaagctctaccgcggcagaacgcaggacgctaacgaagatccc
tcggtggtgggggaattcaagggctcgttcaaaatgtaccccctcccggatgacccaaga
gtgccggtcccaccacgccagttccatcagctcccagccaaagggccccaggagtgtctc
atcaggatctacatcatccgtgcgttcgacttgcaacccaaggactccaatggaaagtgt
gacccctacgtgaagatttcggtgggaaagaaatccataaatgaccaggacaattacatc
ccgtgcacgctggagcccgtcttcggaaagatgtttgagctgacctgcactctgcctttg
gagaaggacctgaaggttactctctatgactacgacctcttgtcgaaggatgagaagatt
ggcgagaccgtcatagacctggagaaccggttcctgtcgaaattcggggcccggtgcggc
ctgccccagacctactgcatttctggacccaaccagtggcgagaccagctccgaccttcc
caactgctccatctcttctccctgcaacgcaactgcaaagctcccatctacaagccagac
cgggtcatattcagggagcaggagtacgtcctctctgagttcgaggatggcaagcccgtc
aacccacacctgggagtgccggaggagcggctcgccctgtacgcgctgcggaagcaaggc
ctggtgcctgagcacgtggagacaaggcctctctacagcccgctgcagcctgagattgag
cagggaaagcttcagatgtgggtagatttgtttccgaagtctctgggtctgcctggacct
ccattcaatatcacgccgcgccgagcaaaaaggttcttcttgcgctgcattatctggaac
accaaagacgtgatcctagatgacctcagcatcactggagagaagatgagcgacatctac
gtgaaaggctggatgattggccacgaggagaacaaacagaagaccgatgtgcattaccgg
tctatgggaggcgaagggaatttcaactggagattcgtcttcccctttgactaccttccc
gctgagcaagtctgtcacattgctaaaaaggagcacttctggagcttggacaagacggac
aataaggtcccaccccagcttatcctccagatctgggacaatgacaaattctcttttgat
gactacttgggttctgttcagatggacctcaaccggatgccagcacccgccaagacggct
gagaagtgctccttaaacctcctggatgagaccttgtcctctgaccgatttgtgtcgctc
tttgagcagaaagctgtcaagggctggtggccctgtgttgtggaggcagaagagaagaag
accatagcaggtaagttggaaatgaccttggagattgtgacagagcaggagcaggaagaa
aggccagcagggacgggccgcgatgagccaaacatgaacccgaagctggaagaccccaag
cgcccggaaacctccttcctgtggttcacctccccctacaaaaccatgaagtacatcctg
tggcggcgcttcaagtgggtctttctcatcgccgtcgtggtcttcatcctgctgctcttc
atcgggattttcatctacgccttcccgaactacgctgctatgaaactggtcaaacctttc
agctga
DBGET
integrated database retrieval system
