Trachemys scripta elegans (red-eared slider): 117878467
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Entry
117878467 CDS
T07347
Symbol
SPP1
Name
(RefSeq) osteopontin
KO
K06250
secreted phosphoprotein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04371
Apelin signaling pathway
tst04510
Focal adhesion
tst04512
ECM-receptor interaction
tst04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117878467 (SPP1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117878467 (SPP1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117878467 (SPP1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117878467 (SPP1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Osteopontin
Motif
Other DBs
NCBI-GeneID:
117878467
NCBI-ProteinID:
XP_034628562
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All DBs
Position
5:complement(23160712..23168305)
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AA seq
316 aa
AA seq
DB search
MKIAVLCLCVISIAFALPVSKLKRHAISESSEENHDSRSHHSHRHHHQHVHTQSRVRPAQ
TQEFLVPPQQDCFSSDESVDTEQQSLPEPASVSNEDDGDHDDNDSNDTDESDEDVVTDFP
TDAPVTTPLTPALPTRGDNSGRGDSVAYRMRAKAKLADVYHKEKSSKLYKAAGKFVIHEV
SEEDASKPETESQQVDSFKAQPAAHRFPGKSDISLELDVKSNMQDSNEVNSRSRDKSMEN
DSQQQLDSVEADSDNSKPDVTEDSHMSNESTEQLRAQIEDLQQVDGIPEVNDSNQTSEST
EDTQDHKSIEDNEVIL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgcagtgctttgtttgtgcgtcatcagcatcgcctttgcattaccagtgagt
aaactgaagcgtcatgccatctcagagagctctgaagaaaaccatgattccaggagccat
cattctcacagacatcaccaccagcatgtgcatacacaatcacgtgtgagaccagcacaa
acacaagaatttctggtaccacctcagcaggactgtttttcttcagacgaaagtgttgac
accgagcagcagagccttcctgagccagcaagtgtaagtaatgaagatgatggtgatcat
gatgataacgattccaatgacacagatgaatcagatgaggatgttgtcaccgattttccc
actgatgccccagtaactacacctttaacccctgccctccccacaaggggagataattca
ggcagaggagacagcgtggcctatagaatgagggcaaaagcaaagttggcagatgtatac
cataaggagaagtctagcaagctctacaaagctgcaggaaagttcgtcatacatgaggtc
tcagaggaggatgccagcaaaccagaaacagaaagccagcaggtggattccttcaaagcc
caacctgctgcacaccgctttccagggaaatctgacattagcctggaactggatgtcaaa
agtaacatgcaggacagcaatgaagtcaacagcaggtcacgcgataagagcatggaaaac
gatagccaacagcagcttgacagtgtggaggcagacagcgacaacagcaaacctgatgtc
acagaagacagtcacatgagcaatgaaagcacagaacagctgcgggcccaaattgaggac
ctacaacaggttgatggtatccctgaagtcaatgatagcaatcaaacttctgagagcact
gaagacactcaagaccataaaagcattgaagacaatgaagtcattctttaa
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