Trachemys scripta elegans (red-eared slider): 117878479
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Entry
117878479 CDS
T07347
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04080
Neuroactive ligand-receptor interaction
tst04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117878479
04082 Neuroactive ligand signaling
117878479
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117878479
Ion channels [BR:
tst04040
]
Ligand-gated channels
GABA-A
117878479
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
117878479
NCBI-ProteinID:
XP_034628578
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All DBs
Position
5:complement(91725607..91833199)
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AA seq
389 aa
AA seq
DB search
MYFQQSWRDKRLSYSGIPLNLTLDNRVADQLWVPDTYFQNDKKSYVHGVTVKNRMIRLHP
DGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWNGGESAVTGVNN
IELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLKRNIGYFILQTYMPSTLITILSWVSF
WINYDASAARVALGITTVLTMTTISTHLRETLPKIPYVKAIDIYLMGCFVFVFLALLEYA
FVNYIFFGKGPHRQKKAAEKATDEKGKPEMNKVQVDAHGNILLTTLELRNEISGSEVFTG
ISDPRATMYSYDSASIQYRRPISSRELYSRSTLDRHMVHKKGSLRRRASQLRVKIPDLTD
VNSIDKWSRMVFPITFIIFNVVYWLYYIH
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtatttccagcagtcctggagggacaaaaggctgtcttattctggaatacctttgaac
ctaactttggacaatagagtagctgaccagctctgggtgccagacacatacttccaaaat
gacaagaagtcatatgttcatggggttacagtgaaaaatcgaatgattcgactacatcct
gatggaacagtcctttatggcctacggattacaactacagctgcttgcatgatggatcta
cgcagataccctctggatgaacaaaactgcacactagaaattgaaagttatggatatacc
actgatgatattgagttttactggaatggaggggaatctgcagtaacaggagttaataat
attgagctcccacagttctcaattgttgattacaagatggtatcaaaaaaagtggaattt
acaacaggggcatatcctcgattatcacttagttttcggcttaaacgaaatattggttac
ttcattttgcaaacctacatgccttccacgttgatcacaattctatcgtgggtatctttt
tggatcaactatgatgcctctgctgcaagagttgccctaggaatcacaactgtgctgacc
atgaccacaatcagcactcatctcagggagacactaccaaagattccctatgtaaaggca
atagatatttacctaatgggatgctttgtgtttgtatttctggccttgctggaatatgcc
tttgtaaactacatattctttgggaaaggccctcaccgtcaaaaaaaggcagctgaaaag
gctactgatgagaagggcaaaccagagatgaataaagtccaggttgatgcccatggaaac
attcttcttacaactctggaattaagaaatgagatcagcggctcagaagtgttcacgggt
atcagtgacccaagagccaccatgtattcatatgacagtgccagcatccagtatagaaga
cccatctcaagcagagaactctacagcagaagcactttggacaggcatatggttcataaa
aaggggagcttacggagaagggcatcacagctcagagtcaaaatcccagatctgacagat
gttaattctatagacaaatggtcaaggatggtctttcctatcacatttattattttcaat
gtagtttattggctttactatatccactaa
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