Trachemys scripta elegans (red-eared slider): 117878480
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Entry
117878480 CDS
T07347
Name
(RefSeq) neurofilament light polypeptide-like
KO
K04572
neurofilament light polypeptide
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tst01009
]
117878480
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117878480
Protein phosphatases and associated proteins [BR:
tst01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117878480
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
117878480
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
VSG_B
Golgin_A5
DUF1664
ATG14
Spc7
ATG17_like
Ribosomal_S19e
Fib_alpha
DUF7201
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
117878480
NCBI-ProteinID:
XP_034628579
LinkDB
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Position
5:139462515..139466491
Genome browser
AA seq
389 aa
AA seq
DB search
MSYDPYGFRKPWQEYRNVRSTKSTVSSSLYALHRPALAPAKRSGCVASLEKLDLSQVSSL
NAELLGLRAQEKEQLVDLNDRFATYIEKVHRLEQQNKVLLVELEALRQKQQDPSRLHLLY
RQELRGLRGLLEAEAGEKMRMEARRDQLRDSCSQLKERYEEEARLRLQAEETLQKVREEA
GQAALANSDVEGSIGSLLGEISLLHKVFGQESAELSAQVEAASLPVDVSLAGAKPDLAAA
LREIRAQYETLAGRNMQAAEDWYRTRFASVAELASKNNEAVRSMREETAEYRRLLQSRSA
EVEALRSIIDSLNKQLESVEDRQSSEVATYQERVADLEQEIREAKQEMARYLREYQDLLN
VKMALDIEIAAYRKLLEGEEIRLSYSSPL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgacccctatggcttccgcaagccgtggcaggagtaccggaacgtccgctcc
accaagtccaccgtctcctcctccctgtacgccctgcaccggccggcgctggcccctgcc
aagcgctcggggtgcgtcgcctccctggagaagttggacctgtcccaggtgagcagcctg
aacgcggagctgctggggctgcgggcccaggagaaggagcagctggtcgacctcaacgac
cgcttcgccacctacatcgagaaggtgcaccggctggagcagcagaacaaggtgctgctg
gtggagctggaggcgctgcggcagaagcagcaggacccctcgcgcctgcacctgctgtac
cggcaggagctgcgcggcctgcgcggcctgctggaggcggaggcgggcgagaagatgcgc
atggaggccaggcgggaccagctgcgcgactcctgcagccagctgaaggagcgctatgag
gaggaggcgcggctgcggctgcaggccgaggagacgctgcagaaggtgcgggaggaggcc
ggccaggccgcgctggctaacagcgacgtggagggcagcatcggctccctgctgggggag
atctccctgctccacaaggtcttcgggcaggagagtgccgagctgtcggcccaggtggag
gcggccagtctgccggtggacgtgagcctggcgggagctaagcccgatctggcggcagcg
ctgcgggagatccgggcgcagtacgagacgctggccggcaggaacatgcaggcggccgaa
gactggtaccgcaccaggttcgcctcggtggccgagctagccagcaagaacaacgaggcg
gtgaggtccatgcgggaggagacggccgagtaccggcgcctgctgcagtcccgctcggcc
gaggtcgaggccctgcgcagcatcatcgactcgctcaacaagcagctggagagcgtggag
gacaggcagagcagcgaggtggccacgtaccaggagcgcgtggctgacctggagcaggag
atcagggaggccaagcaggagatggcgcggtacctgcgtgagtaccaggacctgctcaat
gtcaagatggcgctggacatcgagatcgccgcctacaggaagctgctggagggggaagag
atccggctgagctactcatcccccctgtga
DBGET
integrated database retrieval system
