Trachemys scripta elegans (red-eared slider): 117878504
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Entry
117878504 CDS
T07347
Symbol
SEPTIN11
Name
(RefSeq) septin-11 isoform X1
KO
K16939
septin 6/8/11
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117878504 (SEPTIN11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tst03037
]
117878504 (SEPTIN11)
04812 Cytoskeleton proteins [BR:
tst04812
]
117878504 (SEPTIN11)
04147 Exosome [BR:
tst04147
]
117878504 (SEPTIN11)
Cilium and associated proteins [BR:
tst03037
]
Motile cilia and associated proteins
Sperm associated proteins
117878504 (SEPTIN11)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 1
117878504 (SEPTIN11)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117878504 (SEPTIN11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
GTP_EFTU
Roc
DUF3080
AAA_16
Ras
AAA_22
AAA_29
RsgA_GTPase
AAA_7
DUF4478
RNase_H2-Ydr279
ATG14
ABC_tran
Motif
Other DBs
NCBI-GeneID:
117878504
NCBI-ProteinID:
XP_034628640
LinkDB
All DBs
Position
5:13163973..13236716
Genome browser
AA seq
442 aa
AA seq
DB search
MAVAVERPANDELRNLSLSGHVGFDSLPDQLVNKSTSQGFCFNILCVGETGIGKSTLMDT
LFNTKFESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGDQINKDDSYKPIVEY
IDTQFEAYLQEELKIKRSLFNYHDTRIHACLYFIAPTGHSLKSLDLVTMKKLDSKVNIIP
IIAKADTIAKNELHKFKSKIMSELVSNGVQIYQFPTDEETVAEINATMSVHLPFAVVGST
EEVKIGNKMSKARQYPWGVVQVENENHCDFVKLREMLIRVNMEDLREQTHTRHYELYRRC
KLEEMGFKDTDPDSKPFSLQETYEAKRNEFLGELQKKEEEMRQMFVMRVKEKEAELKEAE
KDLHEKFDHLKRTHQEEKKKVDDKKKELEEELSNFQKKKAAAQLLQSQAQQAGSQQTKKD
KDKKKVFSFLIHSKKWRPMFTL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggcggtggagagacccgcgaatgacgagcttcgaaacctgtccctctccggt
catgtgggctttgacagtcttccagatcagctggtcaacaaatcaacctctcaagggttc
tgcttcaacattctttgtgttggtgaaactggcattggcaagtcaaccttaatggacact
ctgtttaacacaaagtttgaaagtgacccagccacccacaatgagcccggtgtgaggttg
aaagcaagaagctatgaactccaggagagcaacgtccgtctgaagctgaccattgttgac
acagttggatttggagatcagattaataaagatgacagctataagcccatagtcgaatat
atcgacactcagtttgaagcctatctgcaggaggagctgaagatcaagcgttccctgttt
aattaccatgacacaaggattcacgcctgcctatatttcatcgcaccaacaggacactcg
ctgaagtctctagacctggtcaccatgaagaagctcgacagtaaggttaacattatccct
ataatagccaaagctgatacgattgcaaaaaacgagttgcataaattcaagagtaaaatc
atgagcgagctggtcagcaatggtgtccagatctatcagttcccaacagatgaagagaca
gtggctgagataaatgctacaatgagtgtccatcttccatttgctgttgttggcagcact
gaagaagtgaagattggcaataagatgagcaaggccaggcagtatccatggggggttgtg
caggttgaaaatgaaaaccattgtgactttgtgaagctgcgtgagatgctgatccgggtg
aacatggaggacttgagagagcagacgcacacccggcactatgaattgtacaggcgctgt
aagctagaagaaatgggattcaaagacactgaccctgatagtaaaccattcagtctccag
gagacctatgaagcgaagaggaatgaattcctgggtgagctgcagaagaaggaggaagaa
atgagacagatgttcgtcatgagagtgaaggagaaagaagcggagttgaaagaagcggag
aaagatcttcacgaaaagtttgaccatctcaagcggacgcaccaagaagagaagaaaaaa
gtggacgacaaaaagaaggagcttgaggaggagctgagcaacttccagaagaagaaggca
gccgctcagctactacagtcacaggctcaacaggctggttcccaacaaaccaagaaagac
aaggacaagaaaaaagtgttttcctttctgatacattccaagaagtggcgacccatgttt
accctctga
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