Trachemys scripta elegans (red-eared slider): 117878568
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Entry
117878568 CDS
T07347
Symbol
PRDM8
Name
(RefSeq) PR domain zinc finger protein 8
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117878568 (PRDM8)
03036 Chromosome and associated proteins [BR:
tst03036
]
117878568 (PRDM8)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117878568 (PRDM8)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117878568 (PRDM8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
Zf-C2H2_ZNF451_C
DUF1835
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
117878568
NCBI-ProteinID:
XP_034628779
LinkDB
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Position
5:14946714..14968332
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AA seq
584 aa
AA seq
DB search
MEDTGVQRGIWDGDAKAVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFIAL
KSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSARDKEEQNLEAYIKNGQLFYRSLRRI
AKDEELLVWYGKELTELLLLTTARSHSKMNGSPPYACLECSQRFQFEFPYAAHLRFRCPK
RLPSSEPSPAEEPRGKDSGKEPAASLGPGPNKYSKPGGPLHPHYPGPAQDSSNAKPSTDF
HNLARELENSRAGGSSPSRSPHPAPGAGSKAKRKYPEEPGEERGQGAGRGRLPSSPKEDL
VCTPQQQYRPAGSYFGLEESGRLFGPPSPETGEAKRSAFVEVKKASRGLEAEAAAAEEAA
EQQQQRASPAGAGDPLLGARPGGPLSGGSPARGSAFTTVPQLGGKAEERKSAFSQPARSA
FPPHVAPLGLAPKLGSLGEPCPEAAARLYPPDPLAAKLPGGAELPGAGGAPKQSPFLYAT
AFWPKSSVAAAAAGPLQLQLPSALTLLPPSFTSLCLPAQNWCAKCNASFRMTSDLVYHMR
SHHKKEYAMEPLVKRRREEKLKCPICNESFRERHHLSRHMTSHN
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaccggcgttcaaaggggtatatgggatggagacgccaaggcagtccagcaa
tgtttgacggatattttcaccagtgtttacaccacctgcgatatcccggaaaatgcgatc
ttcggcccttgtgtattgagccacacttctttgtatgacagcatcgctttcatagcgctt
aaatccactgacaagagaaccgtcccttatatattccgggtggacacttccgcagcaaat
ggctcctccgaagggctaatgtggctccgtctggtccagtcagccagagataaagaagaa
cagaacctagaagcttacatcaaaaacggacaattgttttatcggtcccttcgcaggatt
gccaaagacgaggagttattagtttggtatgggaaagaactgacggaattactgttgctc
accaccgccagatcccacagcaagatgaatgggtcgcccccgtacgcttgcctggagtgc
agccagcgtttccagttcgagttcccctacgcggcccacctgcggttccgctgccccaag
agactgcccagctcggagcccagccccgccgaggagccgcgcggcaaggacagcggcaag
gagccggcggccagcctggggcccgggcccaacaagtacagcaagcccggcgggccgctc
cacccgcactaccccggccccgcccaggacagcagcaacgccaaaccctccacggacttc
cacaacctggcccgcgagctggagaactcccgggccggcggcagctcgcccagccgcagc
ccgcaccccgcgcccggcgcgggcagcaaagccaagcggaaatacccggaggagccgggc
gaggagcggggccagggggccggcagggggcgcctgccctcctcccccaaggaggacctg
gtgtgcaccccgcagcagcagtaccggcccgcgggcagctacttcggcctggaggagagc
ggccgcctcttcgggccgcccagcccggagacgggcgaggccaagcgcagcgccttcgtg
gaggtgaagaaagcctcgcgcgggctggaggccgaggcggcggcggcggaggaggcggcg
gagcagcagcagcagcgcgcctcgcccgccggcgccggggacccgctgctgggcgcccgg
ccgggcgggccgctctccgggggcagcccggcgcggggcagcgccttcaccacggtgccg
cagctgggcggcaaggcggaggagcggaaaagcgccttctcccagcccgcccgctccgcc
ttcccgccgcacgtggcgccgctggggctggccccgaagctgggcagcctgggcgagccc
tgcccggaggccgccgcccgcctctacccgcccgacccgctggccgccaagctgcccggc
ggcgccgagctgcccggcgccggcggggcgcccaagcagagccccttcctctacgccacc
gccttctggcccaagagctcggtggcggcggcggcggccgggccgctccagctgcagctg
ccctcggccctgaccctgctgccgccctccttcacctcgctgtgcctgccggcccagaac
tggtgcgccaagtgcaacgcctccttccgcatgacttccgacctggtgtaccacatgcgc
tcgcaccacaagaaggagtacgccatggagccgctggtcaagcgccgccgcgaggagaag
ctcaagtgccccatctgcaacgagtccttccgcgagcgccaccacctctcccggcacatg
acctcccacaactga
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