Trachemys scripta elegans (red-eared slider): 117878600
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Entry
117878600 CDS
T07347
Symbol
LRIT3
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117878600 (LRIT3)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117878600 (LRIT3)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
Ig_2
LRR_1
LRR_5
fn3
ig
LRR_14
V-set
C2-set_2
Pur_ac_phosph_N
LRR_EndoS
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
117878600
NCBI-ProteinID:
XP_034628836
LinkDB
All DBs
Position
5:32287665..32301728
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AA seq
654 aa
AA seq
DB search
MSLFVCLCIMISFFEEVNSFCPSQCTCIYHGRSDGTGTRSVLCNDPDMFEIPVNVPVDTV
KLRVEKTVIRRIPTEAFYYLVDLKYLWVTYNCVANIDASSFYNLKQLHELRLDGNLLSSF
PWESLVEMPNLRTFDLHNNKLTSIPSEAGRYLRNLTYLDISSNKLTTLPSELMDIWPPFS
EATPSRNTDPAAQRVILGLQDNPWFCDCRISKLIEFSKIVDTSVVLLDPLVACSGPESLA
GILFQRAELEQCLKPSVMTSATKITSPLGSNVLLRCDATGYPTPQLTWIRSDNLPVNYTV
IQETPGEGVRWSIISLTGISYKDAGDYRCKAKNLAGMSEAAVTVTVVGVVTTTVSPQKYG
KKFEAEQQNNTQEEAKQESEKSTTPPPPLTSLPTTMATTERATSAKITDKKQSKSTADGK
KSSKGVTNGNNKKSEETSKKDEETSLNAAALAEQNVTIKNLKVISETDERVTLTWKTINA
TSNSAVTVLYSKYGEKDMLPLSTDPSKNKVTIDGLQPRTQYMACVCPKGVPPTKDQCIIF
STDGLNDESGSQVSILVMTSSVACVIVLPLIFFLLYKVLKLHRKPKSAREADLAKETYVK
FETLSLKPRSVGTGGELWTRRNTDESERLLLCSRSSMDSQMTFKSEGSRSEYFC
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtttgtttgtttatgcatcatgattagcttttttgaagaggtaaacagtttt
tgtccttcacaatgcacttgcatttaccatggcagaagtgatggcactggaacaaggtct
gtgctgtgtaatgaccctgatatgtttgagattcctgtgaatgttcctgtggacacagta
aaacttcgcgtagaaaaaactgtcatacgaagaatccccactgaagccttttactacttg
gtggatcttaaatacctgtgggtgacctacaattgtgtggctaacattgatgccagcagc
ttttataatttgaagcagctgcatgagttgcgtctggatgggaatttgctgtcaagtttc
ccttgggagtctcttgtggagatgcccaacttaagaacctttgatttacataacaacaaa
ttgaccagcattccgtctgaggctggtagatacctgagaaacctcacctacctggacata
tccagcaacaaactaaccaccttgccatccgaactaatggacatttggccccccttctca
gaagctacaccatccaggaacacagatccagcagcacagagagtcatattaggtttgcag
gacaatccatggttttgtgactgtcggatttcaaagctaattgaattttccaaaatagtg
gacacctctgttgtacttctggatcctcttgtggcttgtagtggacctgagagcctggca
ggtatcttgttccagagagcagagctggaacagtgtcttaaaccatcagtgatgacttca
gcaacaaaaatcacatcgcctctgggaagcaatgtactgctacgctgtgatgccactgga
tatccaaccccacaacttacctggatcaggtcagacaatttaccggtgaactatacagta
attcaagaaactccaggagagggtgtcagatggtccataataagtttgaccgggatttca
tacaaggatgcaggggactacagatgtaaggccaaaaatttggcaggaatgtcagaagct
gctgttactgtcactgtggttggtgttgtcactacgactgtgtcaccacaaaagtatggg
aagaagtttgaagcagagcaacaaaataatacacaggaggaagccaagcaagaatctgaa
aaaagcaccacacctcctccacccttaacatcgctgcccacaacaatggctaccactgaa
agggcaacaagtgccaagattacagacaaaaaacaatccaagtccacggctgatgggaaa
aaaagttcaaagggagtaacaaatggaaacaacaaaaagtctgaagaaacaagcaagaaa
gatgaggagacttcattgaatgcagcagcactggctgaacagaacgtcaccataaagaac
ctaaaagttattagtgaaacggatgaaagagttaccttaacttggaaaaccatcaatgcc
acaagcaactctgcagtgactgtattgtactcaaagtatggtgagaaagatatgctgcct
ctgagtacagatcccagcaaaaacaaagtcacaatagatggtttgcagcctcgtacacaa
tacatggcatgcgtctgtcccaaaggagtcccacctacaaaagatcaatgcattattttc
tccactgatggactaaacgatgagagtggttctcaagtttccattttggtcatgactagc
agtgtggcatgtgtgattgttctacctttgatatttttcttgctctataaagttttaaaa
cttcacaggaaaccaaaatctgctagggaagctgaccttgcaaaagagacctatgtcaaa
tttgaaacactttcccttaagccccgttcagtgggcacaggaggagagctctggactcga
agaaacactgatgagtcagaaagacttctgctttgctctaggtcaagcatggattctcag
atgaccttcaaaagcgagggctccaggtctgagtacttctgttga
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