Trachemys scripta elegans (red-eared slider): 117878612
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Entry
117878612 CDS
T07347
Symbol
SEC24D
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117878612 (SEC24D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117878612 (SEC24D)
Membrane trafficking [BR:
tst04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117878612 (SEC24D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
117878612
NCBI-ProteinID:
XP_034628850
LinkDB
All DBs
Position
5:complement(37708902..37805594)
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AA seq
1041 aa
AA seq
DB search
MSQQGYVATPPYSQSQPGIGGFSTGFGPPTSSPLYGHYGDPNQSYSAPQSGMLKSNVPFG
SSAPVGSPPPGSHQYSQTNLQNGPRSTGHQPHRFQGPSPHNNAAASYPPYCPQSQPSYPN
SASSSSTTQLANQLSTLQINNYGPGASQSSLMPSGIPTSFQGPCPPPPPPTQQQMALPPG
SQISPAPANNLNGVCTPPSLPPMAMQDGIPGSVPPNANLQQLPGQPPVPGYHPQHANYGP
QMAGSQLSYPGAFPGGPGQLAGPQQRKLDPDSIPSPIQVIENDKASRGGQIYATNIRGQV
PPLVTTDSVIQDQGNASPRYIRCTAYCFPSSSDMAKQAQIPLAAIIKPFAAVPPNETPLY
VVNHGETGPIRCNRCKAYMCPFMQFIEGGRKYQCGFCNCINDVPPFFFQHLDHIGRRTDH
YERPELSLGSYEYVATLDYCRNNKPPNSPAYIFMIDVSYSNIKSGLVKLICNELKTVLDK
LPREEQEETTAIRVGFVTYNKVLHFFNVKSNLAQPQMMVVSDVGEVFVPLLDGFLVNFQE
SRSVVNNLLDQIPEMFADTNESETVFAPVIQAGMEALKAAECAGKLFIFHSSLPTAEAPG
KLKNRDDKKLINTDKEKILFQPQVNIYESLAKDCVANGCCVNLFLFPNQYVDVASMGLVT
MYTGGTLYKYNNFQVHSDGPQFLSDLRKDIEKRTGFDAIMRVRTSTGFRATDFFGAIYMN
NTTDIEMAAVDCDKAITVEFKHDDKLNEDSGALIQCAVLYTSISGQRRLRVHNIGLNCSS
QLADLYKSCETDALINFFAKSAFKAILSQPLKTIREILVSQTARMLACYRKNCASPSAVS
QLILPDAMKVLPVYINCLLKSCVLVGRPEIPTDERAYHRQLVMSMDVADTQLFFYPQLLP
IHTMDVKSDAFPTAVRCSEERLSEGGVFFLANGLNMFLWLGVSAPPELIQGIFNVPSFAH
LSTEATLLPEVDNPYSKKLRSIMDYIQSNRPYSMKLLIAKQREQAEMLFRQYLVEDKSLY
GGASYVDFLCCVHKEICQLLN
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacaaggttatgttgcaacacctccatattcccaatcccaaccgggtattgga
ggtttttctacaggctttggaccacctacttcttcacctctttatgggcattatggcgac
ccaaaccaatcatactcggcacctcagtcaggtatgttgaaatctaatgtgccttttggg
tcctctgctcctgttggatctccacctcctggcagccatcagtatagccagactaacctc
cagaatggcccccgttcaactggacatcagccacacaggtttcaaggcccttcacctcac
aacaatgcagcagcttcctatcccccgtattgccctcagtcacagccatcctatccaaat
agtgcatcctcttcatccacaacacaactggctaatcagctcagcaccctgcagataaat
aactatggtcctggtgcttctcagagttctctcatgccttctgggattccaacatctttt
caaggtccatgtcctcctccaccaccaccaacacagcagcaaatggccttgccacctgga
tctcagatttctccagcaccagcaaataatctgaatggcgtttgtactccaccctcactg
cctccaatggctatgcaggatgggattcctggatctgtacccccaaatgccaacttgcag
caacttccaggacaacccccagtgcctgggtatcatccacagcatgccaactatggccct
cagatggcaggctctcagctctcttatcctggtgcctttcctgggggcccaggacagctt
gctggtccacagcagaggaagcttgatcctgactccatcccaagccccattcaagtaatt
gaaaacgataaggcttccagaggaggtcaaatctatgctacaaacatcagaggccaagtt
cctcctcttgtcaccacagattctgtgatccaagatcaaggcaatgccagccctcgttat
attcgatgtactgcctactgcttcccatcctcttccgatatggccaaacaagctcagatt
ccattggctgctattatcaaaccttttgctgctgttccaccaaatgagacacctctttat
gttgtcaaccatggggagactgggccaattcgatgcaacagatgcaaagcctatatgtgt
cccttcatgcagttcattgaagggggaagaaagtatcaatgtggattttgcaactgcata
aatgatgtccctccattcttctttcaacatctggaccacattggcagaagaacagaccac
tacgagaggccagagttatctctaggatcatatgaatatgtcgctacattggattattgc
agaaacaacaagcctccaaactcaccagcctatatcttcatgatcgacgtgtcatatagt
aacataaagagtggccttgttaaactcatatgtaatgagctgaagactgtgctggataaa
cttccaagagaagagcaagaagagaccacagctattcgagttggctttgtcacctataac
aaagttcttcatttctttaacgtaaagagcaacctagctcagcctcagatgatggtagta
tcggacgttggagaagtctttgttcctttgctggatggtttccttgtcaactttcaggaa
tcacgatctgttgtgaacaacttgttggaccagattccagagatgtttgcagacactaat
gagagtgagactgtctttgctcctgttatccaggctggcatggaagcactaaaggcagca
gaatgtgctggaaagttgtttatcttccattcttcattgccgactgctgaagcaccaggg
aagctgaaaaacagagatgacaaaaaactgatcaatacggataaagagaagatacttttc
cagccgcaggtgaatatttatgagtctctggccaaagattgtgtggctaatggctgctgt
gtgaatctgttcctcttcccaaaccagtatgtggatgtagcctccatgggtcttgtcaca
atgtacactggaggaactctttacaaatacaacaattttcaggtacattctgatggtccc
caattcctgagtgacctcaggaaggacatagaaaaaagaacaggatttgatgcaatcatg
agggttcgcacaagtacaggtttcagggccactgacttctttggtgccatttacatgaac
aacaccacagatatagagatggcagcagtcgactgtgacaaagcaataacagtggagttc
aagcatgatgacaaactgaatgaagacagtggagccttaattcagtgtgctgtactttac
acttcgataagtgggcaaagacgactccgcgtacacaatattggcttaaactgtagttcc
cagttagcagatctctacaagagttgtgaaactgatgcacttataaacttctttgctaaa
tcagctttcaaagccattctaagccagcctttaaagacaatcagagagatcctggtgagt
cagactgctcgtatgttggcatgttacagaaagaattgtgccagtccatctgcagtaagt
cagcttatccttcctgatgcgatgaaggtgctaccagtttatattaattgtttattaaaa
agttgcgtgctagttggcagaccagaaattccaacagatgaaagagcttatcataggcag
ttggtcatgtctatggatgttgctgatacccagttgtttttctatccacagcttctgcca
attcacactatggatgtaaagagtgatgcttttcccactgctgtccgttgctcagaggaa
cgtctgtctgaaggaggggtattcttcttggcaaacgggctaaatatgttcttgtggctt
ggagtcagcgccccaccagagcttattcaagggatctttaatgtgccatcctttgcacat
ctcagcactgaggctacactactccctgaagtggacaatccctattctaagaagctcaga
tcaataatggattacatccagagcaacagaccttactccatgaagctgctaatagcaaag
caacgagaacaagcagaaatgcttttccgacaatacctggtggaagacaaaagtctttat
ggaggagcttcttacgttgatttcttatgctgtgtccataaagaaatctgtcagttgctc
aactaa
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integrated database retrieval system
