KEGG   Trachemys scripta elegans (red-eared slider): 117878675
Entry
117878675         CDS       T07347                                 
Symbol
UBAP2
Name
(RefSeq) ubiquitin-associated protein 2 isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tst04121]
    117878675 (UBAP2)
   03400 DNA repair and recombination proteins [BR:tst03400]
    117878675 (UBAP2)
Ubiquitin system [BR:tst04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    117878675 (UBAP2)
DNA repair and recombination proteins [BR:tst03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117878675 (UBAP2)
SSDB
Motif
Pfam: UBAP2-Lig UBA_4 UBA_RAD5A GIP1_N UBA CUE DUF1510
Other DBs
NCBI-GeneID: 117878675
NCBI-ProteinID: XP_034628901
LinkDB
Position
6:3168407..3221964
AA seq 1119 aa
MMTSVGSERTRGTRDKTQISTTQPTQPQKQVVQATAEQIRLAQMIYDKNDADFEDKVKQL
MEVTGKNQDECIVALHDCNGDVNRAINILLEGSSDTTSWETVGGKKKSLGKESSENKENR
EKRGDREVSRGRGSSNRRGRGGSRGREFRVEENGVDNSQGERPSDRGKRGRGRGFGRGRG
RGAGRFSAQGMGTFNPADYTETSATDGFGPKPEVWETGQNDADDGTGAWKNSIEEWTAED
WNEDLSETKVFTASSVPAENHITPGQSIDLVTLLQKPVTSSQETEGNSFESPQQQSFGQA
LVFTNSQHNTQMASGTGNSSAVNSYSPQSLSSVLCSGFGELGSSKLANSTGSPLLDQLKS
PGLGQFTSPSSQQNSSSSTATTATTTSSWDLKPPISQSSVLSQFDFKSQPEPSPVLSQLT
QRQQQQTQAVPVPPPGLESFSSQVKLREPSPVDSSMAASKMLQLPSMSMDNQAVSAHQTQ
QKQIKPPKRRIPPASKIPASAVEMPGSADVTGLNVQFGALEFGSEPSLPEFGSAPSNENI
SQVPSNSLYSKPVNDPLNTSLPISNTVQESTYTTSAITSSSLTCSSQSTSPVTTTSSYDQ
TSVHSRIAYQSSMAPSDSTPVAVTNGHSGVRTQPTLDTTSSVPTSKTETSPSLPTAGSLP
STASSTASLLPSAPQHTATLPSLPQSSDLASSSLSQLSSSLSNHQNSLSSAAALSASTSH
AHTSVESTASLQPSTTFSTASTSATSTTSSVVSMASSMNTTNSLGLSVTSVSMPAASTRA
APLVSSGKAPPNLPQGVPPLLHNQYIVGPGGLLPAYPQIYGYDDLQMLQSRLPMDYYGIT
FPAPATLTGRDGSLANNPYSGDVTKFGRGDSASPAPATTLAQPQQNQTQTHHTTQQPFLN
PTLPPGYSYTGLPYYAGVPGVPSAFQYGPTMFVPPASAKQHGVNLNTASTPFQQASGYGQ
HGYGAGYDDLTQGTAAGDYSKGGYSGSSQAQNKSAGTGPGKGVSVTSSNTGVPDISGSVY
NKTQTFDKQGFHAGTPPPFSLPSALGSTGPLNPGAAPGYAPAPFLHILPAHQQPHSQMLH
HHLQQDGQGGSGQRNQPSTMQQKSQATKTAYGTSPYWTN
NT seq 3360 nt   +upstreamnt  +downstreamnt
atgatgacttcggtgggcagtgaacgtacccggggcactcgggacaaaacacagatttca
accacacagccaacacaaccacagaaacaagtagtacaggcaacagcagaacagattcgc
ctcgctcagatgatctatgataagaatgatgcagattttgaagataaagtgaaacaactt
atggaagtgacggggaagaaccaggatgaatgcatagtggcgctacatgattgtaatggg
gatgtgaatagagcaatcaacatactgctggaaggaagctcagacacaacttcatgggag
actgtagggggaaagaagaaaagccttggaaaggagagctcagaaaacaaagagaacaga
gaaaagcgaggggacagagaagtgagccgtggacggggaagctccaacagacggggaaga
ggaggcagccgtggccgagaatttcgagtagaagagaatggagtggacaacagtcaaggg
gagaggccttcagaccgtgggaagcgtggtcgtgggagagggtttggacgtggcagaggg
cgaggagctgggagattttcagcccaaggcatggggacatttaaccctgcagactacacg
gagacttctgccacagatggctttgggccaaaaccagaagtttgggagactggtcagaat
gatgcagatgatggaactggagcatggaagaattcgatagaagaatggacggcagaagac
tggaatgaagatctttctgaaacaaaggtcttcactgcatcttctgttccagctgagaat
cacatcactcctgggcaaagcattgacctagtaacgttacttcagaaacctgtgacttct
agccaagaaacagaaggcaactctttcgagtctccccaacagcagagctttggccaagcc
ctagtcttcacgaattcccaacacaacacccagatggcatcaggaactggcaattccagt
gctgtcaactcctattctcctcagagtctgtcttcagttctctgttctgggtttggagaa
cttggatcctctaaattagcaaactccactggatctccgctcttggaccagttgaagtct
ccaggtttgggtcagttcacctctccgagctctcagcaaaacagcagtagctccactgcc
accactgctaccaccacatcatcctgggatctaaaaccccctattagccaatcctctgtc
ctcagtcagtttgactttaaatcccagcctgaaccatccccagttctcagccagctgacc
caacgacagcaacaacagacacaggcagtccctgttcctcctcctggcttggagtccttc
tcctcccaagtaaaactccgagagccatcaccagtagacagttctatggctgcaagcaaa
atgctgcagctccctagcatgtctatggataaccaggcagtgtctgcccatcaaacgcag
cagaaacagatcaaaccaccgaaacggaggatacccccggcttctaagatccctgcctct
gcagtggaaatgcctggatcggccgatgtgacggggttaaatgttcagtttggagctctg
gagtttgggtcagagccttctctcccagagtttgggtcggccccaagcaatgagaatatt
agccaggtgcccagcaacagcttgtactcgaaacctgtaaatgatcctttgaatacctct
ttgccaatatccaatacagtacaggagtccacctacacaacctctgccatcacttcttcc
agtctgacctgctcatcccagagcactagccccgtaacaacaacttcctcctatgaccag
acttctgtgcatagcaggatagcataccaaagctccatggctccatcggactcaacccct
gttgcagtcacgaatgggcacagtggtgttcgaacacagccaactcttgacactacttca
tcagttccaacgtctaagacagaaacctctccctcgctacctactgcggggtctctgcct
agcacggcgtcctccactgcttcgcttctgccttcagctccacagcacacagcaacgtta
cccagcttgccccagtccagtgacttggccagcagctcactctcccagttaagcagttcc
ctctccaatcatcagaacagcctctcctctgctgcagcgctgtctgcgagcacctcacat
gcgcacaccagtgtggagagcacagcttcactccagccctcaacaaccttttcaactgct
tcaacctcagccactagcaccacatcctcagttgtcagcatggcaagcagtatgaacact
acaaacagccttggcctgagcgttaccagtgtgtctatgccagctgcttctacacgggca
gctcccttagtgtcttcaggcaaagctccccccaacctgccccaaggtgtaccacccttg
ttgcataaccagtatattgtgggacctggaggactcctgcctgcctacccacagatctat
ggttatgacgatcttcagatgctccaatccaggctgccaatggattattatggaattaca
ttccctgctcctgcaaccttgacaggcagagatgggagccttgctaacaacccatactca
ggtgatgtaacaaaatttggccgcggggattctgcctcccctgctcctgctaccaccctg
gcccagccgcagcagaatcagacgcagacgcaccataccactcagcagcccttcctaaac
cctacgctgcccccaggatacagctacacgggattaccatattacgccggcgtgccagga
gtacccagtgcattccagtatgggcccaccatgtttgtacctccagcatcagccaagcag
catggcgtcaatttgaacaccgcttccaccccgtttcagcaggcaagtggttatggacaa
catggttatggagcaggctatgacgacttaacgcagggaacggcggctggagactacagc
aaaggaggctacagtgggtcatctcaagcacaaaacaaatctgctggcactggacctggg
aaaggtgtttctgtgacctcaagtaacacaggtgtgcctgatatcagtggctcagtctat
aacaagactcagacgtttgacaagcagggattccatgccggcacaccgcctcctttcagc
ctgccatctgctcttggatccactgggccactgaaccctggtgctgccccaggttatgct
ccagccccgttcctgcatatcctgcctgcacatcagcagcctcattcccagatgctgcat
caccaccttcagcaagatgggcagggtggatctggccagcgcaatcagccaagcaccatg
cagcaaaagtctcaggctaccaaaaccgcctatggcacttctccatactggacaaactaa

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