Trachemys scripta elegans (red-eared slider): 117878718
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Entry
117878718 CDS
T07347
Symbol
RNF170
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117878718 (RNF170)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117878718 (RNF170)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117878718 (RNF170)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_2
zf-RING_5
zf-C3HC4_2
TRAF3_RING
zf-Nse
DpnI_C
Prok-RING_4
zf-ANAPC11
zf-rbx1
zf-RING_10
Sina_RING
Motif
Other DBs
NCBI-GeneID:
117878718
NCBI-ProteinID:
XP_034629005
LinkDB
All DBs
Position
6:complement(124178492..124233817)
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AA seq
256 aa
AA seq
DB search
MASQQAEVQSLKLDNDSVIEGISDQVLVAVVLSFTFIAALVYMLLRNEHQNIHPDNQELV
RALRQQLQTDQDASAGDRHRFYTDMSCPVCLQQATFPIETNCGHLFCGACIIAYWRYGSW
LGAIRCPICRQTVTLFLPLFGEDQQDAAQVLQDVNDYNRRFSGQPRSIMERIMDLPTLLR
HAFREMFTVGGLFWMFRIRIFLCLLGALLYLASPLDFLPEALFGILGFLDDFFVIFLLLI
YISIMYREVITQRLNR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcaacaagcagaagttcagagtttgaaactagataatgattcggttatagaa
ggaataagtgaccaggtactggtggctgttgtgctcagtttcactttcattgctgctctg
gtgtatatgctcttaagaaatgagcaccagaacattcatccagacaaccaagagctagtg
agggcacttcggcagcagcttcaaacagaccaggatgcatctgctggtgatagacatcgt
ttctatactgacatgtcctgtccagtctgtttacagcaggctacgtttcccattgaaaca
aactgtggacatcttttctgtggtgcctgcattattgcatactggaggtatggctcgtgg
ctgggtgccatccgttgcccaatctgcagacaaacggtaacattgtttttaccgctcttt
ggtgaagatcagcaggatgcagcacaagtgcttcaagatgttaacgattacaaccggaga
ttctcaggacagcccagatctattatggaaagaattatggatttacccactttactgcgg
catgctttcagggagatgtttactgtagggggccttttctggatgttccgtatcagaata
ttcctctgcctgctaggagctctgctctatctggcttcacctctggattttcttcctgaa
gccctcttcggaattctgggatttttagatgatttctttgtcatctttctgttgctaata
tacatctctatcatgtaccgagaagtgataacgcagagactgaatagatga
DBGET
integrated database retrieval system
