Trachemys scripta elegans (red-eared slider): 117878744
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Entry
117878744 CDS
T07347
Symbol
XRCC4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117878744 (XRCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117878744 (XRCC4)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117878744 (XRCC4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4_C
XRCC4
XLF
Rootletin
Motif
Other DBs
NCBI-GeneID:
117878744
NCBI-ProteinID:
XP_034629060
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Position
6:48960319..49244212
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AA seq
336 aa
AA seq
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MEKKVSRIYPVSEPSTIYFLQVTWEKDLGTGFIITLSDGQSAWTGTVSEAEISKEADDME
MEREKYVEELRKALVLGAGPANMYNFDVSKDEENVESCDFSYEKNLKDVSFRLGSLKLQK
VSSPTEVIKELICHCLDCIAELHAKKEHLQKENERLLSDWNDVQGLLEKCVEAKEELEAD
LYKKFILVLNEKKAKIRNLHKLLKEAQEPAEDTTHARDSMATVQTAVEREKDYDGSTDEE
CENLAQPSTLASALSRRDSLLNSPDVIDIAPSRKRRQRIQKPAGVEPKVATYETQLPAKE
KLDPAPSKASDKHPSDVSTLETQKNTAEPEDLFDDI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaagtgagcagaatttatccagtttctgagccaagcacaatatattttcta
caagtcacttgggaaaaagacctaggcactggctttattataacacttagcgatggtcag
tcagcatggactgggacagtgtctgaagctgagatttctaaggaggctgatgacatggaa
atggaaagagagaagtatgttgaagaactgaggaaagcactagtattgggagcaggccca
gccaatatgtacaactttgatgtttctaaagatgaagaaaatgtggaaagctgtgatttc
tcatatgaaaaaaatctgaaagatgtttcctttagacttggatcactgaagctacaaaaa
gtctcaagtccaactgaagtcattaaagagctgatttgccactgcctagactgcatagca
gaactacatgccaaaaaggagcacctgcaaaaggaaaatgaaaggcttctaagtgattgg
aatgacgttcaaggactgctggaaaaatgtgtggaagctaaagaagaactggaggcagat
ctttacaaaaaatttattcttgtgctcaatgaaaagaaagcaaagataagaaatttacac
aagttgttaaaagaagctcaggaacctgcagaggatacaacacatgcaagggatagcatg
gctacagtccaaactgctgttgaaagagagaaagattatgatggcagcactgatgaggaa
tgtgaaaatttagcacagccctctacattagcatcagctctatcaaggagagattccctt
ctcaacagccccgatgtcattgatattgcaccaagtagaaaacggagacaaaggatacaa
aaacctgctggagtggaacctaaggtggctacatatgagacccagctaccggcaaaggaa
aaacttgatcctgctccatcaaaggcatcagacaagcacccatcagatgtgtcaacactg
gaaactcagaaaaacactgctgagccagaggacctctttgatgacatctaa
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