Trachemys scripta elegans (red-eared slider): 117878858
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Entry
117878858 CDS
T07347
Symbol
ERBIN
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117878858 (ERBIN)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_LRWD1
LRR_5
PDZ_6
PDZ_2
LRR_NXF1-5
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
117878858
NCBI-ProteinID:
XP_034629360
LinkDB
All DBs
Position
6:38570719..38814739
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AA seq
1458 aa
AA seq
DB search
MTTKRNLFVRLVPCRCLRGEEETVTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEE
LPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIV
EASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTM
NRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGLIGSLKQLTYLDVSKN
NIEIVEEGVSGCESLQDLLLSSNSLQQLPESIGSLKKVTTLKIDENQLMYLPDSIGGLIS
VEELDCSFNEIEALPSSIGQLTNIRTFASDHNFLIQLPPEIGNWKNVTVLFLHSNKLEFL
PEEMGDMQKLKVINLSDNRLKNLPYSFTKLQQLTAMWLSDNQSKPLIPLQKEVDPETQKT
VLTNYMFPQQPRSEDVLFISDNESFNPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNL
KRYPTPYPDELKNMVKTVQTIVHRLKDEETTEDGGKESKREGQQVSVKDVGVKTSEIASA
KSKTEDRENYMMENCVQKPTEPEAEHSTGNSQMTAHVKTLENTKIIVNHEDTLEESEELS
SDEEMKMAEMRPPLIETSINQPKVVALSNNKKDKDADSLSDEATHNSNHNNSNCSSPSRM
SDSVSLNTDSSNDTSVCSPDKETHSAAISKIRQEDENFNSLLQNGGELNITAEEEINVQE
KVTNLPEYELRIEERLALIEKGVDLNTTTEESHKLDQINMNINKLTSEDTIQPSVMERLK
TQEIVSVKGCLNYNMKEETEHLENRNQYSNLCSISKVNGNSEKVPQSPRKAELKRGITVD
TDSSVDICISKSTEDLSPQRSGPVVKSHSITNIDTGALKIFDIVNDNGSQEPNSLVKSAS
AGPDGKNIVRSKSATLLYDQPLQVFPGSSSSSDLVSCTKTLFKFDSNHNPEGANVVRGPG
ASGAQMFSVPQYNIQYSSSTTAKDTLWLPKQNAQIEQGSLPPQRLSRSDSTESSNYVKHT
ANMNFSNHNNVRANAAYNMHQRMGGRHLEMWAIPPNDRLVPGATRNTLQRQSSISSTASI
NVGDTGPPRRAQVPEGDYLTYRDLHSMGRAPPIMSGQPRPLSARTYSIDGPNAPRPQSAR
PSVNEIPERTMSVSDFNYSRTSPTKRPNPRVNSEHSLLDPPGKSKVPHDWREQVLRHIEA
KKLEKSMLSRSFNSNYAAVSSFQYGSSRDLHGSQSSVALSVADRRGSGVHIVRHPQTSTP
GEPCQEDVFISGQQNYSSGTLNLKDVPPDSMKKVAAQIPLTNGQMCQPHRPQTNYSQAHH
PPPQASVARHPSREQLIDYLMLKVAHQPPYTQPQCSPKQVNEMAKQEIRVRIEKDPELGF
SISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIDHGQAVSL
LKTFQNTVELIIVREVSS
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaagcggaacttgtttgtgcggttggtgccatgccgctgtctgcgtggagaa
gaagaaactgtcactgcacttgattattctcactgcagcctggaacaagtgccgaaagag
atatttacctttgaaaagaccttggaagaactctatttagatgcaaatcagattgaggag
cttccgaagcaactttttaactgtcaatccctgcacaagctgagtttgccagacaatgat
ctaacaactttgccagcatccattgcaaatctcattaatctcagggaactggatgtcagc
aagaatggcatacaggagtttccagaaaacatcaaaaactgtaaagttttggcaattgtt
gaggccagtgtaaatccaatttcaaagcttccagatggattttcccaactgttaaaccta
acacagctgtacctgaatgatgctttccttgagtttttgccagccaattttggcaggtta
actaaactccagatactggaactgagagaaaaccagttaaaaatgttgccaaaaaccatg
aacagactgactcagctggagagattggacttaggaagtaatgaattcacagaagtgccg
gaagtacttgaacaactgagtgggttaaaggaattttggatggatggtaatagactaact
cttatccctgggttaattggcagcttgaaacagctgacctacttggatgtttctaaaaac
aacattgaaatagttgaagaaggtgtttcaggctgtgaaagcctacaagacctgctgtta
tccagtaattcacttcagcaacttccagagtccataggttcactaaagaaagtaacaaca
cttaaaattgatgaaaaccagttgatgtatttgccagactccataggagggctaatatcc
gtagaagaactggattgtagtttcaatgagattgaagctttgccttcatctattgggcaa
ctcactaacataaggacctttgcttcagatcataattttttaatacagctgccaccagag
attggaaactggaaaaatgtaacagtgctatttctgcattccaacaagcttgaatttctc
cctgaagaaatgggtgatatgcagaaattaaaagtcatcaatctaagtgacaatagactg
aagaatttgccctatagctttacaaagctacaacagctgactgcgatgtggctatcagac
aatcagtctaaaccgctcatcccccttcaaaaagaagtcgaccctgaaacacagaaaaca
gtgcttactaattacatgttcccccagcaaccaaggagtgaagatgttctgttcatatct
gataatgaaagtttcaatccctctttgtgggaggagcagagaaaacagcgtgctcaggtg
gcatttgaatgtgatgaagataaagatgaaagggaggcaccacccagggagggtaatttg
aagagatatccaacgccatatcctgatgaactaaagaatatggtcaaaacagttcaaacg
atagtacacagactaaaagatgaagaaaccactgaagatggtggcaaagagtcaaagaga
gaaggccagcaagtttcagtaaaagatgtgggtgtaaagacttcagaaattgcttcagca
aagagcaaaacagaagacagagagaactatatgatggaaaactgcgtgcagaagcccact
gaaccagaagctgagcacagcactggaaattcacagatgactgcacatgttaaaacctta
gagaacacgaaaataattgtcaaccatgaagatacgcttgaggagtcagaagaactttct
tctgatgaagagatgaaaatggcagaaatgcgcccaccgctgatagaaacttccattaac
caaccaaaagtagtagcacttagcaataataaaaaagataaagatgcagattccttatca
gatgaagctacccacaacagcaatcacaataacagcaattgttcctctccttctcgaatg
tcagattcagtttctctaaataccgacagtagcaatgacacttcagtgtgctctccggac
aaagaaacacatagtgctgctatttccaaaatcaggcaagaagatgaaaattttaatagc
cttttgcaaaatggaggtgaattaaacatcacagcagaagaagaaatcaatgtgcaagag
aaagttacaaatttacctgaatatgagttaaggattgaagagagattagctctaatagaa
aaaggtgttgatctaaacacaactactgaggaatcacacaaattagaccaaattaacatg
aacatcaacaaactgactagtgaagatacaatacaaccaagtgttatggaaagattaaag
acacaggaaatagtgtcagtaaagggctgtttaaactataacatgaaagaagaaactgag
cacttggaaaatagaaatcaatattctaacctctgttctataagtaaagtgaatggaaat
tctgagaaagtaccacaatctccaaggaaggctgaattaaagagaggcattacagttgac
actgattcttctgtggatatatgtatttcaaagagcactgaagatctgtccccacagcga
agtggtcctgtggtgaaatctcacagtatcaccaacatcgacactggtgctctaaaaatt
tttgatattgttaatgacaatggatcccaagagcccaactcactggtaaaatcagcatct
gctggtccagatggaaaaaacattgtccgaagcaagtctgctactcttctatatgaccaa
cctttgcaggtatttcctggatcatcatcatcttctgatttagtatcttgtacaaaaact
ttgtttaagtttgattcaaatcacaatcctgaaggtgctaatgtagttagaggaccaggg
gcaagtggtgcacagatgttcagtgtacctcagtataatatccaatatagcagcagtaca
acagccaaagacaccttgtggctcccaaaacaaaatgcccaaatagaacaagggagctta
ccacctcagcgtctatctaggtcagacagcacagaaagctctaattatgtaaaacatact
gccaacatgaatttctccaatcataataacgttcgagccaatgctgcatataacatgcat
caaaggatgggtggaagacatttagaaatgtgggctattccaccgaatgatagacttgtt
cctggagcaaccagaaatactcttcagagacagagcagcatatcctctacagcttccata
aatgttggtgatactggacccccaaggcgtgcccaggttcctgaaggggactacttaaca
tatagagatttgcattcaatgggaagagctccaccaataatgtctgggcaaccgagacct
ctttctgcaagaacgtacagcattgatggtccaaatgcacctagacctcagagtgctcgt
ccttcagtgaatgaaataccagaaagaactatgtcagttagtgactttaattattcacgg
actagtcccacaaaaagaccaaacccaagggttaattctgaacattctttgttagaccct
ccaggaaaaagcaaagtccctcatgattggcgggaacaggtgctgcgacacattgaagct
aaaaagttagaaaagagcatgctgtctaggtcctttaattccaattatgctgcagttagc
agctttcagtatggcagctctagggatctgcatggcagccagagtagtgttgccttgagt
gttgcagacagaagaggttctggtgtgcacattgttcgtcatccccagacatccacccca
ggagagccatgccaagaggatgtattcatttcaggacagcagaactattcatctggcaca
cttaatctcaaagatgttcctccagacagcatgaagaaagtagctgcacagatacctttg
acaaatgggcagatgtgccagcctcacaggcctcagacaaactatagtcaagcccatcat
ccacctccccaagcatctgtggcaagacatccctctagagagcaattaattgattatctg
atgctgaaagttgcgcatcaacctccctatactcagcctcagtgttctcccaaacaagtc
aatgagatggcaaagcaagagattcgagtgagaattgaaaaagatccagagctaggattt
agtatatcaggaggagttggtggtagaggaaacccattcagacctgatgatgatggtata
tttgtaaccagagtgcagcctgaaggaccagcatctaaattgttgcagcctggagataaa
ataattcaggctaatggatacagcttcatcaatattgatcatggacaagcggtgtccttg
ctgaagacttttcagaacacagtggaactcataattgtgcgagaggtttcttcataa
DBGET
integrated database retrieval system
