KEGG   Trachemys scripta elegans (red-eared slider): 117878874
Entry
117878874         CDS       T07347                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tst03036]
    117878874 (KDM4C)
Enzymes [BR:tst01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     117878874 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     117878874 (KDM4C)
Chromosome and associated proteins [BR:tst03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117878874 (KDM4C)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF7141 SLX1_C LBR_tudor Tudor_5
Other DBs
NCBI-GeneID: 117878874
NCBI-ProteinID: XP_034629404
LinkDB
Position
6:complement(106797408..107219583)
AA seq 1065 aa
MAAVVSDSPPNPSCKIMTFRPSMDEFREFNKYLAYMESKGAHRAGLAKVIPPKEWKPRKH
YDDIDDLVIPAPIQQMVTGQSGLFTQYNIQKKPMTVKEFRQLANSDKYCTPRYIDYEDLE
RKYWKNLTFVAPIYGADINGSIYDEDIDEWNIAHLNTILDVVGEDCGISIEGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQGFFPSSSQGCDAFL
RHKMTLISPSILKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATIRWID
YGKVAKLCTCRKDMVTISMDIFVRKFQPDRYQLWKQGKDLYTIDHTKPTPETTPEVKAWL
QRRRKTKKPPKCFQHTRSRSKKLKTPEDERESAMIVGAEIIATEAATDGFKVNEKPEEKV
KLVNSEVPSGEEKNISRTQLDQHLLDNIEVSGNICSNSLFSPTPVMQKIKTEDEDKEDSS
IASFTPKNSTLPIPTSVSCIKEEDDSLKSQNQSEQVESCQKSPGYASFESESLEKGETNS
VSTEDDVSDLESSESSESGLEPGEIPALAEIERKKTCKSWRHPLSKPPARSPMTLVKQQA
VSDEELLETPLIEEEVQETESWAKPLVHLWQKRAPDFIAEKEYNAAAAKMEPHCAICTLL
MPYYKPDNHNEENYTCWETKSDETFTAGEKTKPLIPEMCFIYSEENTENYPSNAFIEEDG
TSLLISCAKCCVQVHASCYGVPSHEIHDGWLCSRCKKGAWTAECCLCNLRGGALKQTTDK
KWAHVMCAIAIPEVRFGNVTERTPVDTRRIPLQRLKLKCIFCRQRMKKFSGACIQCSYGR
CPASFHVTCAHAAGVLMEPDDWPYVVYITCFRHKINQNVRTKACEKAITVGQTVITKHRN
TRYYSCRVIGVTSQVFYEVMFDDGSFSRDTFPEDIVSRDCRKLGPPAEGEVVQVKWPDGK
LYGAKYLGANVAHMYQVEFEDGSQIAMKREEIYTLDEELPKRVKARFSTASDMRFEDTFY
GADIIQGEKKRQRVLSSRFKNEYVDDPGYRTFLKSSFQKKCQKGL
NT seq 3198 nt   +upstreamnt  +downstreamnt
atggcagctgtagtctcggacagtcctcccaacccaagctgcaaaatcatgacttttagg
ccttcaatggatgaattcagggagttcaacaaatacttagcgtacatggaatcaaaaggt
gctcatcgtgctggacttgcaaaggtgatcccacccaaggagtggaagccgagaaaacat
tacgacgacattgatgatctagtgattccagctccaattcagcagatggtcactggtcaa
tcagggcttttcactcaatacaacattcagaaaaagccaatgaccgtgaaagagttcagg
caactggccaacagtgacaaatactgcactccaagatatatagattatgaagatctggag
cgtaaatactggaagaatttaacctttgtggcaccgatctatggagcagatatcaacggg
agcatttatgatgaagatattgatgaatggaatattgcccatctcaatacaatattggac
gttgtgggtgaagactgtggaatttctattgagggtgtaaataccccgtatctctatttt
ggcatgtggaaaacaacatttgcatggcacactgaagatatggatctctacagtattaat
tatctccactttggggagccgaagtcatggtatgcgatccctccagaacacggaaaacgg
cttgaaagactagctcaaggattcttcccaagcagctctcaagggtgtgatgcttttctt
cgccacaagatgacgctgatttctccctcaatattgaaaaaatatggaattccttttgac
aagatcacacaggaggcaggggaatttatgataaccttcccatatggatatcatgcggga
tttaaccatggtttcaactgtgcagagtcaaccaactttgccacaatcagatggattgat
tatggaaaagtagctaaattgtgcacctgcaggaaagacatggtaacaatatcaatggat
atctttgtgaggaagtttcaaccagacagatatcaactgtggaaacaaggaaaggattta
tataccattgatcacacgaagcccacgcctgaaacaacacctgaggtaaaggcctggttg
cagagaagaaggaaaacaaagaaacctcccaaatgcttccagcataccagatctcgatct
aaaaagcttaaaactccagaggacgagagagaatcagctatgatcgttggtgcagaaatc
atagccactgaagcagctacagatggcttcaaggtcaatgaaaagccagaagaaaaagtg
aagctggtaaattcagaagtgccttctggggaagagaaaaacattagcagaacgcagctg
gatcagcatttattggataatattgaggtctcagggaacatctgttcaaactcacttttc
agccctactcctgtaatgcagaaaattaaaacagaagatgaggacaaggaagattccagt
attgcttcctttacacctaagaattctacactccccatacctacatctgttagttgtata
aaggaagaagacgactctttaaaatctcagaatcagtctgagcaggttgaatcatgccag
aagtcacctggatatgcttcctttgaatcagagagcctggaaaaaggggaaacgaatagt
gtgtccacagaggatgatgtcagcgacctagaaagcagtgaaagtagcgaaagtggcttg
gaacctggagaaatacctgccttagcagaaattgaaagaaagaaaacatgtaagagttgg
cgtcatccactaagtaaacccccggccagatctcctatgaccctcgttaaacagcaggca
gtaagtgatgaagaactgcttgagactcccttaatcgaagaggaagtgcaagaaacagag
tcatgggccaaacctcttgtccacctttggcagaaaagagcacccgatttcattgctgaa
aaagaatataatgcagctgcagccaaaatggaaccccattgtgccatttgcactctcctt
atgccctactataagccagacaaccataatgaagaaaattatacttgctgggaaacaaaa
tcagatgaaacatttacggctggtgaaaagactaaaccacttattccagagatgtgtttt
atttatagcgaagaaaacactgaaaactatccatcaaatgcctttattgaagaggatgga
acaagtcttctaatatcctgtgcaaagtgttgtgtacaggttcatgcaagttgttatggt
gttccttctcatgaaatccatgatggatggctgtgttctcggtgcaaaaaaggagcctgg
acagctgaatgctgtctctgcaatttgagaggtggtgcactcaagcaaactactgacaag
aagtgggcacatgtgatgtgtgcaatagcaattccagaagtcagatttggtaatgttaca
gagaggacaccagtagacactaggagaatacctctgcagagattaaaattgaaatgtatc
ttctgcagacagagaatgaagaaattttccggtgcctgcatacagtgttcttatgggcgt
tgtccagcttccttccatgttacctgtgcccatgctgcaggggtgctgatggagcctgat
gactggccttatgttgtctacatcacatgtttcagacacaagatcaatcaaaatgtgagg
accaaagcatgtgagaaggccatcacagtgggacagactgtcatcacaaaacacaggaac
acacgatattatagttgcagagtgataggagtgacatctcaagtcttctatgaagtcatg
tttgatgatggctccttcagtcgggacactttccctgaagatattgtaagcagagactgc
cggaagctgggtccacctgcagagggagaggtggtccaagtgaagtggcctgatggaaaa
ctgtacggggcaaaatatctgggagcaaatgtagctcacatgtatcaggttgagtttgaa
gatggttctcagatagcaatgaagagggaagagatttacacgttagatgaagagctgcct
aaacgagtgaaagcccgtttctcgacagcctccgacatgagatttgaagacacattttat
ggagcagatattatccagggagagaagaagagacagagagtcctgagttcccggtttaag
aatgaatacgtggatgaccctgggtaccgcacctttttgaaaagctcattccagaagaaa
tgccagaagggactataa

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