Trachemys scripta elegans (red-eared slider): 117878894
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Entry
117878894 CDS
T07347
Symbol
PTGER4
Name
(RefSeq) prostaglandin E2 receptor EP4 subtype
KO
K04261
prostaglandin E receptor 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04080
Neuroactive ligand-receptor interaction
tst04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117878894 (PTGER4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117878894 (PTGER4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tst04030
]
117878894 (PTGER4)
G protein-coupled receptors [BR:
tst04030
]
Rhodopsin family
Lipid
Prostaglandin
117878894 (PTGER4)
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Ortholog
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
NdhL
DUF7471
Motif
Other DBs
NCBI-GeneID:
117878894
NCBI-ProteinID:
XP_034629456
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All DBs
Position
6:25610015..25622285
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AA seq
471 aa
AA seq
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MSFDHTTIYTTANSSTSEHGDGKPPTIPTVMFIFGVVGNLIAIVVLCKSRKEQKETTFYT
LVCGLAITDLLGTCLVSPVTIATYLQNRWPGGSELCEYSSFILLFFGLSGLSIICAMSIE
RYLAINHAYFYNHYVDKKLAGLTLFAIYVSNVLFCALPSMGLGKSTLQYPQTWCFIDWKT
KEATHAAYSYMYAGFSSFLIMVTVVCNVLVCVALIRMHRQFMRRTSLGTDNTASRLSDFR
RRRSFRRMAGAEIQMVILLIATSLVVVICSIPLVVRVFVNQLYRPDIVKDVSQNPDLQAI
RIASVNPILDPWVYILLRKTVLSKVIEKIKCLFCRIGGARRQHSGSNFNCADGRRTSSAM
SSHSPSFISRELREISSTSQTLLYPPELSESSTGGRMLLPGASAGLAQCDTTSVRTLRSS
ETSDSLPGQDSESVFLVNEVRSGGEAGSVPKSSSLQVTFPSETLNLSEKCI
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgaccacaccaccatatacacaacagcgaacagttccaccagtgagcatggg
gacggcaagccccccaccatccccactgtcatgttcatctttggggtggtgggcaacctg
attgccatcgtggtgctttgcaagtccaggaaggagcagaaggagaccactttctacacg
ctggtgtgtgggctggcaatcactgacctcttggggacctgtctggtgagcccagtcact
attgccacatacctgcagaaccgctggccgggtggatctgaactgtgtgaatacagctcc
ttcatcctccttttcttcgggctctctggcctcagcatcatctgtgccatgtctatagaa
aggtacctggccattaaccatgcctatttctacaaccattatgtggataagaagctggca
gggctcactctctttgccatttatgtctccaatgtgctgttctgcgccctacccagcatg
ggactaggcaaatctaccttacagtacccccaaacttggtgtttcatagactggaagacc
aaggaggccacccatgccgcctactcctacatgtatgccggcttcagctccttcctaatc
atggtcacggtagtctgcaatgtcttggtgtgtgtggccctgattcgcatgcatcgtcag
ttcatgcgacgcacctccctgggcacagacaacaccgccagccgcttgtctgactttcgc
cggcgcaggagctttcgtcgcatggctggagcagagatccagatggtcattttgcttatt
gccacctccctggttgtggtcatctgctccattcctctggtggtacgtgtcttcgtgaac
caactgtaccgaccagacatagtgaaggatgtcagtcaaaaccctgacttgcaggccatc
cgcattgcttcagtgaaccccatcctggatccctgggtctacatcctcctccgcaagaca
gtgctcagcaaagtcatagagaaaatcaagtgcctcttctgccgcattggaggggctcga
aggcaacactctgggagcaatttcaactgtgcggatggacgccgaacctcctccgccatg
tccagccactcaccttccttcatctctcgggagctgagggagatcagtagcacctcacag
acattgctctaccctccagagctaagtgaaagtagcactgggggtcgcatgctgctgcca
ggagccagtgctggtctggctcagtgtgacactacatcagtgaggacattacgcagctca
gagacctcagactctttgccgggacaggactctgagagtgtctttctggtgaatgaagtc
aggtctggtggcgaagccggctctgtgcccaaaagcagctccctccaggtcacctttccc
agtgaaacgttgaacttatcagaaaagtgtatatag
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