Trachemys scripta elegans (red-eared slider): 117878917
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Entry
117878917 CDS
T07347
Symbol
RAD23B
Name
(RefSeq) UV excision repair protein RAD23 homolog B isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03420
Nucleotide excision repair
tst04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117878917 (RAD23B)
09124 Replication and repair
03420 Nucleotide excision repair
117878917 (RAD23B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tst03051
]
117878917 (RAD23B)
03400 DNA repair and recombination proteins [BR:
tst03400
]
117878917 (RAD23B)
Proteasome [BR:
tst03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
117878917 (RAD23B)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117878917 (RAD23B)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
UBA_3
New_glue
Dsc3_N
UBA_2
DUF1421
Ubiquitin_2
UBA_9
Motif
Other DBs
NCBI-GeneID:
117878917
NCBI-ProteinID:
XP_034629541
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Position
6:127404346..127466963
Genome browser
AA seq
414 aa
AA seq
DB search
MQITLKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVVMVTKPKAAAAPTPSPATTQQSNATTTTVSSTTTAAAAPVPAPLPVPAP
APAPTPPTPAAVACEPVPVSATKEEKPVEKPVEATAAISPTSTDSTSGDTSRSNLFEDAT
SALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPGDRETQAAADP
PQAASTGASQSSAVAAAAATTTTTTSSSGGHPLEFLRNQPQFQQMRQIIQQNPNLLPALL
QQIGRENPQLLQFSHAPQQISQHQEHFIQMLNEPVQESGGQGGGGGGGSGSGGVAEAGSG
QMNYIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDED
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaccctgaaaaccctgcagcagcagaccttcaagatcgacatcgaccccgag
gagacggtgaaggcgctgaaagagaagatcgaatcagaaaagggaaaagatgcttttcca
gtagctggccaaaaactaatttatgcaggtaaaatccttaatgatgatactgctcttaaa
gaatacaaaatcgatgagaagaactttgtggtggttatggtgacaaaacccaaagcagca
gctgctccaacaccatcaccagctacaacgcagcaatcaaatgctaccactactactgtt
agttctactacaacagctgctgcagcccctgtaccagctcctctaccagtccctgctcct
gccccagcccctacccctccaacaccagctgcagtggcttgtgaacctgtacctgtaagt
gccactaaagaagagaaaccagtggagaagcccgttgaggcaacagctgctatcagccca
acatcaactgacagtacatcaggtgatacttctcgatcaaacctttttgaggatgctaca
agtgcacttgtgacaggtcagtcttatgagaatatggtgactgagatcatgtcaatgggc
tatgagcgagagcaagtaattgcagcactgagagccagcttcaacaatcctgacagagca
gtggagtaccttctaatgggtatccctggagatagagagactcaagctgcggctgatcct
cctcaggcagcaagcactggtgcttctcaatcttcagcagtggcagcagcggcagcaacc
acaactacgactactagttcttcaggcggacatccacttgaatttttacgaaatcaacct
cagttccagcagatgagacaaattattcagcagaatcctaatctgctgccagcattgcta
cagcagataggacgggaaaacccccagctactgcagttctcccatgcaccacagcaaatc
agccaacatcaggagcattttattcagatgttaaatgagccagttcaagagtctggtggc
caaggaggaggaggtggtggtggcagcggcagtggaggagtagcagaagctggaagtggt
cagatgaactacattcaagtaacacctcaggagaaagaagctatagagaggttaaaggca
ttaggatttcctgaaggacttgtgatacaagcatattttgcttgtgagaagaatgaaaac
ttggctgccaactttcttctacaacagaactttgatgaagattga
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integrated database retrieval system
