Trachemys scripta elegans (red-eared slider): 117878941
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Entry
117878941 CDS
T07347
Symbol
POLI
Name
(RefSeq) DNA polymerase iota isoform X1
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117878941 (POLI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117878941 (POLI)
Enzymes [BR:
tst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117878941 (POLI)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
117878941 (POLI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
UBM
IMS_C
IMS_HHH_1
IMS_HHH
Cdd1
Motif
Other DBs
NCBI-GeneID:
117878941
NCBI-ProteinID:
XP_034629592
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All DBs
Position
6:complement(16330799..16348373)
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AA seq
756 aa
AA seq
DB search
MELPEEEEEELDWLCPEPGGPWNHAAPGRDSATTLGAQSGHDKTVPSGNTAHRVIVHTDL
DCFYAQVEMIHNPELRDKPLGVQQKYLVVTCNYEARRLGLQKCMSVKDAKEKCPELVLVN
GEDLTRYREMSYKVTELLEEFSPLVERLGFDENFVDITELVEKRLAQLQRDGCSKVSVSG
HVYNNQTVNLHDVMHIRLVIGSQIAAEMREAMYNRLGLTGCAGVASNKLLSKLVSGTFKP
NQQTVLLPESCQDLVGSLDHIRKVPGIGYKTTKRLELLGLSSVRDLQTFSPVILEKELGV
SIAQHIQKLSYGEDDSPVTSSGPPQSLSDEDSFKKCSSEVEVKRKIEELLANLLDRISKD
GRKPHTIRLTIRKFSSTNKWFSRESRQCPIPPHVIQKFGTGNYDVVDPLVGILMKLFRKM
IKVEMPFHLTLLSVCFSNLKALPSLTKGSIGFYLTRLSPPSSSGKKIEGVPQDQVNSCSF
VPDGRIRNTRTRESSLETKSCAEEHGIPVSPIHLPPAGIDQEVFSQLPEDIKEEIISDKT
GQRIHTKNVLSQPLPFSKGALPFFAQEQMHTTPNSRRADHSISSLVCSEHFQSTSELETA
MVHRPNPNCILSLQDPPEYPESALIDDCMEQIPKESLNFNSTDSIVLNMQSQHFLQPHSS
DRQEQPIGAASQDKDQREQASGEGRIVFPPNVDPNIFSELPAEMQKELLAEWKNLKPVSK
MHMNKPSEKLKTNKGKKTVVNTTPHSNSLLRYFKPK
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggagctccccgaggaggaggaggaggaactggattggctttgcccggagcctggcggt
ccttggaaccatgcggcgcccgggagagactccgccaccacgctcggagcacaatcaggt
catgacaagactgtgccatcaggaaatacagcgcacagggtaattgtgcatactgacctg
gactgcttttatgcacaagtagaaatgatccataatcctgaattaagagacaaaccttta
ggtgttcagcagaaatacttggttgttacctgtaactatgaagccaggagacttggactt
cagaaatgtatgtctgtcaaagatgctaaagaaaaatgcccagagctagtgctagttaat
ggagaggacttgacacgatacagagaaatgtcatacaaggttacagagctattggaagaa
ttcagtccactggtagaaagacttggatttgatgaaaattttgtggatatcacagagttg
gtagagaagagactagcacagctgcaaagagatggctgttccaaagtgtctgtgtctggt
catgtgtataataatcaaactgtcaatttacatgatgttatgcatattagacttgtcatt
ggatctcagattgcagcagagatgagggaagccatgtacaatagattgggtcttacaggc
tgtgcaggagtggcctctaacaaattactatctaaattagtatctggcaccttcaaacca
aatcaacaaacagttcttctacctgaaagctgtcaggacctagtaggcagccttgatcac
atcagaaaagtgcctgggattggctataaaactaccaagcgcctagagttgctgggtctc
agcagtgtgcgtgatctccagaccttttcacctgtaatactagaaaaggaactaggagtt
tcaattgctcagcacattcaaaagctcagctatggagaggatgactcccctgtgacctcc
tcaggacctcctcagtcccttagtgatgaagattcttttaaaaaatgttcatcagaagtg
gaagttaaaaggaaaattgaagaactacttgctaaccttttagacagaatatccaaagat
ggaagaaagccacatacaataagattaaccatccgtaaattttcatcaactaataaatgg
tttagtcgggagagtcgtcagtgtcctattccccctcatgtcattcagaaatttgggaca
ggaaactatgatgttgtggacccactggttggtatccttatgaaattgtttagaaagatg
ataaaagtggagatgccatttcatcttacccttctgagtgtctgcttctcaaatcttaaa
gctctgcctagcctcaccaaaggatccataggattttatttaactcggttgtcaccccct
tcaagttctggcaaaaaaattgaaggtgttccacaagaccaggtgaactcctgcagtttt
gtaccagatggaagaattagaaatacaagaactagagaatcttcactagaaaccaaaagc
tgcgcagaagaacatggaattcctgtttccccaattcatttgcctcctgctggcattgac
caggaggtcttcagtcagcttccagaagacattaaagaggaaattatttctgacaaaact
gggcaaaggatccatacaaagaatgttttgagtcagccattacctttttctaaaggagca
ctaccattttttgcacaagaacaaatgcacactaccccgaattccagaagagcagatcat
agtatcagcagtctggtatgcagtgaacatttccaatctaccagtgagctggagacagcc
atggtacacaggcctaatcctaattgtattctcagtctacaggatcctcctgagtaccct
gaaagtgcgctaatagatgactgtatggaacaaatacctaaggaatcactgaatttcaat
agcactgattcaattgtattgaacatgcaaagtcaacattttcttcagccccacagttca
gacagacaagagcagcccattggagcagcctctcaggataaagatcagagagagcaagcg
tcaggagaaggaagaattgtatttcctcctaatgttgacccaaatatcttttctgaacta
cctgctgaaatgcaaaaggaactactggctgaatggaagaatctaaaacctgtttccaaa
atgcatatgaataaaccttctgaaaagctaaaaacaaacaaaggaaaaaagactgtggtg
aacacaacaccgcattctaacagtttattaaggtattttaaaccaaaatga
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