Trachemys scripta elegans (red-eared slider): 117878998
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Entry
117878998 CDS
T07347
Symbol
SNX2
Name
(RefSeq) sorting nexin-2 isoform X1
KO
K17917
sorting nexin-1/2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117878998 (SNX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117878998 (SNX2)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117878998 (SNX2)
Membrane trafficking [BR:
tst04131
]
Endocytosis
Macropinocytosis
Sorting nexins
117878998 (SNX2)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117878998 (SNX2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps5
Sorting_nexin
PX
BAR_3_WASP_bdg
FAM92
GrpE
HR1
DUF4618
Motif
Other DBs
NCBI-GeneID:
117878998
NCBI-ProteinID:
XP_034629701
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All DBs
Position
6:73250177..73307422
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AA seq
538 aa
AA seq
DB search
MTERTRSSRPSTEGKMAAEREPPPLGEARQPELEELEDGEDLFTSTVSTLESSPSSPEPA
SLPTEDISTNSNGPKTAEIILDDDREDLFAEATEEVSLDSPEREPILSPDPTPAITPVTP
TTLVTPRMESKSITAPVIFDRSREEIEEEANGDVFDIEINVSDPEKVGDGMNAYMAYRVT
TKTSLSMFHKNEFSVKRRFSDFLGLHSKLATKYLHVGYIVPPAPEKSIVGMTKVKVGKED
SSSTEFVEKRRAALERYLQRTVKHPTLLQDPDLRQFLESSELPRAVNTQALSGAGILRMV
NKAADAVNKMTIKMNESDAWFEEKQQQFENLDQQLRKLHASVEALVCHRKELSANTAAFA
KSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYVFSELLGDYIRLIAAVKG
VLDHRMKCWQKWQDAQVTLQKKREAEAKLQLANKPDKLQQAKDEIKEEIEEWETKVQQGE
RDFEQISKTIRKEVGRFEKERVKDFKTVIIKYLESLVQTQQQLIKYWEAFLPEAKAIA
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaggaccaggagctcgcgccccagtacggaagggaagatggcggcggagagg
gagccccctccgctcggggaagccaggcagcctgagctcgaggagctggaggacggcgag
gatttgttcaccagcactgtgtccacgctggagtcaagcccatcgtctccggaaccagcc
agtcttcctacagaagacatcagcacaaactctaatggtccaaagactgcagaaatcata
ctagatgatgacagggaagacctttttgctgaagctacagaagaggtttctctggacagt
ccagaaagggaaccaatactgtctccagatcctactcctgcaatcactcctgtaacgccc
actacactagtaactcccagaatggaatcaaaaagtataacagcccctgtgatttttgat
agatccagggaagagattgaagaggaagcaaatggagacgtatttgatatagaaatcaat
gtctcagacccagagaaagttggggatggcatgaatgcttacatggcatacagagtaaca
acaaagacatccctttctatgtttcacaaaaatgaattctctgttaaaagaagattcagt
gactttcttggtttgcacagcaaattagcaacaaaatacctgcacgttggttacattgtg
cctccagctccagaaaaaagtattgtaggcatgaccaaggttaaagtaggcaaggaagat
tcatcatctacagaatttgtagaaaaaagaagagctgcactagaaaggtatctacaacga
acagtaaaacacccaaccttgttacaggatcctgatttaaggcagttcttggaaagttct
gagctgccgagagcagttaacacccaggctctgagtggagcaggaatattgaggatggtg
aacaaggctgccgacgctgtcaacaaaatgacaatcaagatgaatgaatcggatgcatgg
tttgaggaaaaacagcaacaatttgagaatctggatcagcaacttaggaaacttcatgcc
agtgtagaagccttggtctgccacagaaaagagctttcagccaacacagctgcctttgct
aaaagtgctgccatgttaggtaactctgaggaccacactgctttatctagagctttgtct
cagcttgcagaagttgaggagaaaatagaccagttacatcaagaacaagcttttgctgac
ttctatgtgttctcagaactgctcggtgactacattcgtcttattgctgcagtaaaaggt
gtgttagatcatcgaatgaaatgttggcagaaatggcaagatgctcaggtcactttacag
aaaaaacgtgaggctgaagcaaagctccaacttgccaacaaacctgataaactgcaacaa
gctaaagatgagataaaggaggaaattgaagagtgggagacaaaagttcagcaaggggag
agagactttgaacagatctccaaaaccatacgcaaagaagtgggaagatttgagaaggaa
cgagtgaaagactttaaaactgttattatcaagtacttagaatcattagtgcaaacacaa
cagcagctgataaaatactgggaggcattcctacctgaagccaaagccattgcctag
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