Trachemys scripta elegans (red-eared slider): 117879018
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Entry
117879018 CDS
T07347
Symbol
SYK
Name
(RefSeq) tyrosine-protein kinase SYK isoform X1
KO
K05855
spleen tyrosine kinase [EC:
2.7.10.2
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04625
C-type lectin receptor signaling pathway
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117879018 (SYK)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117879018 (SYK)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tst01001
]
117879018 (SYK)
Enzymes [BR:
tst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.2 non-specific protein-tyrosine kinase
117879018 (SYK)
Protein kinases [BR:
tst01001
]
Non-receptor tyrosine kinases
SYK family
117879018 (SYK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
SH2
DUF7145
DUF7063
Kdo
ABC1
Motif
Other DBs
NCBI-GeneID:
117879018
NCBI-ProteinID:
XP_034629749
LinkDB
All DBs
Position
6:complement(79676168..79750765)
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AA seq
636 aa
AA seq
DB search
MATNMANSANHLPYFFGNITREEAEDYLLQGGLSDGLYLLRQSRNYLGGFALSLAHGKKV
HHYTIERELSGSYAIAGGKSHMSPAELINYHSDEADGLVCLLRRPCNRPPGIEPKTGPFE
DLKETLIREYVKQTWNLQGNALEQAIISQKPQLEKLIATTAHEKMPWFHGKISREESEHR
VLLGTKTNGKFLIRERDNNGSYALCLFSEGKVLHYRIDRDKTGKLSIPDGKKFDTLWQLV
EHYSYKPDGLQRVLTIPCARLGSENANIIFDTRPPPLPGIHPKTWSTGGIISRLKSYTFP
KPGSKKFHPSMPHDDSASFNPYVLQRTRVLMGAEQGDQRDALPMDTEVYESPYADPEEIK
PKNVSLDRKMLSLDEEELGSGNFGTVKKGLYMMKKGAKPVAVKILKNENNDPAVKDELLR
EANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKFLQKNRHVKEKNITELVHQVS
MGMKYLEENNFVHRDLAARNVLLVTQHYAKISDFGLSKALASDENYYKAQSHGKWPVKWY
APECMNFYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGSEVAQMIERGERMESPEACPT
EVYDLMKLCWTYKIDERPGFSAVELRLRNYYYDISH
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaacatggctaacagtgctaaccatctgccctacttttttggcaatattaca
cgtgaagaagcagaagattacctgctgcaaggaggactgagcgatggactatatctgttg
cgccagagtcgaaactaccttggtggttttgctttgtccctggcacatggaaagaaggtt
catcactacacaattgaaagagagctgagtggctcttatgccattgcaggagggaagtca
catatgagtcctgctgaactcattaactatcactcagacgaagctgatggtcttgtttgt
ctactgaggagaccttgcaaccggccaccaggcattgagccaaaaacaggaccatttgag
gatttaaaagagacccttatcagggaatatgtcaaacaaacttggaacctacagggtaat
gccctcgaacaagctattattagtcaaaaaccacagctggagaagctgattgccactact
gcccatgagaagatgccttggttccatgggaagatctctagggaagaatcagagcatcgt
gttcttttagggacaaagaccaatggaaaatttttaatcagggaaagggacaacaatgga
tcctatgctctctgtctgttcagtgaaggaaaagtactgcattatcgtattgacagagac
aagacaggaaagctctctataccagatggaaaaaagtttgacaccctctggcagttagtt
gaacattattcatacaaaccagatgggctgcaaagggtcctcacaattccatgtgcacga
cttggctcagaaaatgctaacattatttttgacacccgtccacctccacttcccggaatc
catcctaagacttggtcaacaggtggaattatctcaagactcaaatcgtacacctttcca
aagcctggcagcaaaaagttccatccatctatgcctcatgatgattcagcatcttttaat
ccttatgtgctgcagaggacgagagttctaatgggagctgaacaaggagatcagagggat
gccttgcccatggacaccgaagtctatgaaagtccatatgcagatccagaggagataaaa
cccaaaaatgtctcactagacagaaaaatgctgtctctggatgaagaagaacttggctct
ggtaactttggtactgtaaagaaagggctctatatgatgaaaaagggtgccaagccagta
gctgtaaaaattcttaagaatgagaataacgatccagccgtaaaggatgaattactgaga
gaagccaatgtaatgcagcaactggataacccatacattgtcagaatgataggcatatgt
gaagctgagtcctggatgttagtaatggagatggcggaacttggaccattaaataaattt
ttgcagaaaaaccgacatgtcaaggaaaagaatataacagagctggtgcatcaggtttcc
atggggatgaaatacttggaagaaaacaattttgtgcacagggatttggctgcaagaaat
gtgttgctagttacccaacattatgccaaaattagtgactttggactttccaaagctctt
gcttctgatgagaattattacaaggcacaaagtcatgggaaatggccagtcaagtggtat
gctccagaatgtatgaacttctacaaattttctagcaagagtgatgtttggagctttggg
gttctaatgtgggaagctttttcctatgggcaaaagccatataagggaatgaaaggaagt
gaggttgcccagatgattgaaagaggagagcgaatggaatctcctgaggcttgtccaact
gaggtctatgacttgatgaaactctgttggacatacaagattgatgagcgaccaggattt
tctgctgttgagctcagactacgtaactactattatgacatttcacattaa
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