Trachemys scripta elegans (red-eared slider): 117879024
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Entry
117879024 CDS
T07347
Symbol
CHSY3
Name
(RefSeq) chondroitin sulfate synthase 3
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tst01100
Metabolic pathways
Module
tst_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117879024 (CHSY3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tst01003
]
117879024 (CHSY3)
Enzymes [BR:
tst01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
117879024 (CHSY3)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
117879024 (CHSY3)
Glycosyltransferases [BR:
tst01003
]
Glycan extension
O-Glycan
117879024 (CHSY3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
117879024
NCBI-ProteinID:
XP_034629769
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Position
6:77734393..77997924
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AA seq
848 aa
AA seq
DB search
MAARSRRPWLSVVLGLVLGFTAASWLIAPKVAEMSERKRRASSLCSYYGRAAGGARAQQE
AAAAAAALGGTGFRSSPWELQAEEGTVPSPPAAAGGEGEPEEEEEAGEKRSGRHGSSHNG
SGDWGGPAGCAKPRNFLYVGVMTAQKYLGSRAVAAQRTWARFIPGRVEFFSSQGSTAPLA
GPGLPPLPVVALPGVDDSYPPQKKSFMMIKYMHDHYLDKYEWFMRADDDVYIKGEKLEEF
LRSLNSSKPLYLGQTGLGNIEELGKLGLEPGENFCMGGPGMIFSREVLRRMVPHIGECLR
EMYTTHEDVEVGRCVRRFGGTQCVWSYEMQQLFHENYEHNRKGYIQDLHNSKIHTAITLH
PNKRPAYQYRLHNYILSRKISELRYRTIQLHRESALMSKLSNSEINKEDQQLGMMPSFNR
FQPRERNEVIEWEFLTGKLLYSVAENQPPRQSINSILRAALDDTVMQVMEMINENSKSRG
RLIDFKEIQYGYRRVDPMHGVEYILDLLLLYKRHKGRKLTVPVRRHAYLQQLFSKPFFKE
AEELDVRSLVENINSDTQSFSFLSNSLKIFSSFHGTKEIGGHSDKKIHILVPLTGRYDIF
LRFMENFEKTCVIPRQNVKLAVILFSSDSGQDSSKHRELIKEYHNKYPKADMTLIPMTGE
FSRGLGLEMASSQFDNDTLLLFCDVDLIFTPDFLQRCRDNTIQGQQVYYPIIFSQYDPKV
IYRGNPPGDNNFVFTKKTGFWRDYGFGITCIYKSDLLSAGGFDTSIQGWGLEDVDLFTKV
ITSGLKAFRSQEVGVVHVFHPVQCDPNLDPKQYKMCLGSKASTFASTMQLAELWLEKHLG
VRYNRTLS
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcggtcccgcagaccctggctgagcgtggtgctggggctggtgctgggcttc
accgccgcctcctggctcatcgcccccaaagtggccgagatgagcgagaggaagagacgc
gcctccagcctttgctcctactacggccgcgcggcggggggcgcccgggcgcagcaggag
gcggcggcggcggctgcggcgctggggggcaccggcttcaggagcagcccttgggagctg
caggcagaggagggcaccgtccccagccccccagccgcggccggcggggaaggggagccg
gaagaggaggaggaagccggggagaagcggagcgggaggcacgggagcagccacaatggg
agcggggactgggggggtcccgcgggctgtgcgaagccccgcaacttcctctacgtgggg
gtgatgacggcccagaagtacctgggcagccgggcggtggcggcgcagcggacctgggcg
cgcttcatccccggcagggtggagttcttctccagccagggctccaccgccccgctcgcg
gggcccgggctgcctccgctgccagtcgtcgccctgcccggggtagacgattcctacccg
ccccagaagaaatccttcatgatgatcaagtacatgcacgaccactacctggacaagtac
gagtggttcatgcgggcggacgacgatgtctacatcaaaggtgaaaaattggaggagttc
cttaggtcgctgaacagcagtaaacctctctatttggggcaaactggtctgggaaatatt
gaagaacttggaaaactggggcttgagcctggagaaaatttctgcatgggagggccagga
atgatcttcagtagagaagttctcaggagaatggtgccacatataggtgaatgtcttcga
gaaatgtacaccacacatgaggatgtggaagtgggaagatgcgtccgccgatttggtgga
acccagtgcgtttggtcatatgagatgcagcaattgttccatgaaaattatgaacacaac
cggaagggttacatccaagatcttcacaacagtaaaatacacacagctataacacttcat
ccaaataaaaggccagcctaccaatacagactccacaattacatactgagccgcaaaatt
tcagaactacgctatcgcaccatccagctccatagagaaagtgccctaatgagcaagctc
agtaacagtgaaataaataaggaagatcagcagctgggaatgatgccatctttcaatcgc
ttccagccccgtgaaaggaatgaagtaattgaatgggaattcctgacagggaagctcctt
tactctgtggctgagaatcaaccacccagacaaagcattaatagcattctgcgggcagca
ctggatgacacagtgatgcaagtaatggaaatgataaatgagaactctaaatctagagga
aggcttattgatttcaaggaaatacaatatggctaccgtagggttgatcctatgcatgga
gtggagtacatcctggatttactacttttgtacaaaagacacaaaggaagaaaacttaca
gttccagtgagacgtcatgcttaccttcagcaattgtttagcaagccttttttcaaagag
gcagaggaactggatgtaagaagccttgtggagaatattaacagtgatactcagtctttc
tcttttctttcaaattctttaaagattttttcatcatttcatggcaccaaagaaatagga
ggacatagtgacaagaaaatacatattcttgtccctctcacaggaagatatgacattttc
ttaagatttatggagaattttgaaaagacttgtgttattcccaggcagaatgtaaagctg
gcagtaattctgttcagctctgattctggccaagattccagcaaacacagagagttaatt
aaagaatatcataataagtatccaaaggcagatatgaccctaattcctatgacaggagag
ttttccagaggtttaggtcttgaaatggcctcatctcaatttgacaatgacactttgctg
ctattctgtgatgttgacctgatattcacaccagactttctccaacgatgtagagataat
actattcaaggacagcaggtttattatcccatcatctttagtcaatatgatccaaaagta
atatacagaggcaaccctccaggtgacaataactttgttttcacaaagaaaactggattt
tggcgagactatggatttggaatcacttgtatttacaaaagtgatctactgagtgctggt
ggatttgatacctcaattcaaggctggggacttgaggatgtagacctctttactaaagta
ataacttctgggctgaaggcttttagaagtcaagaagtaggagttgtacatgtttttcat
ccagttcagtgtgaccccaatttagaccctaaacaatataaaatgtgcttggggtccaaa
gcaagtacatttgcatctaccatgcagctggctgaactctggctagaaaaacatttaggt
gtcaggtacaatcgaactctctcctga
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