Trachemys scripta elegans (red-eared slider): 117879033
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Entry
117879033 CDS
T07347
Symbol
RNF20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117879033 (RNF20)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117879033 (RNF20)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
117879033 (RNF20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
BRE1
zf-rbx1
Toxin_SdpC
TraF_2
Motif
Other DBs
NCBI-GeneID:
117879033
NCBI-ProteinID:
XP_034629791
LinkDB
All DBs
Position
6:117267968..117290458
Genome browser
AA seq
981 aa
AA seq
DB search
MSGIGNKRAATEPGPSGPPEKKAGVEDSGTTVETIKLGGVSSTEELDIRTLQTKNRKLAE
MLDQRQAIEDELREHIEKLERRQATDDASLLIVNRYWSQFDENIRIILKRYDLEQGLGDL
LSERKALVVPEPEPDSDSNQERKDERERGEGLEPAFSFLATLASSTSEEMESQLQERVES
SRRAVAQIVTKYDKLQEKMDMLSHKLNSGDASLVDEAVQELNSYLAHENGRLQELADLLQ
EKHRIMSQEFSKLQEKVEMAESRVCVLETMIDDLQWDIDKIRKREQRLNRHLADVLERVN
SKGYKVYGAGSSLYGGTITINARKFEEMNAELEENKELAGNRHSELEKLRQDLEEVTTQN
DKLKVELRRAVEEAVKETPEYRCMQSQFSVLYNESLQLKAHLDEARTLLHGTRSTHQRQV
ELIERDEVSLHKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLI
SSLQNHNHQLKGEVLRYKRKLREAQSDLSKTRSRSGSALLQSQSSTEETKEEPPEVKQEP
DDSSAQASVPKAAPEDASDAKAKRDEEERERERREKEREREKEKEKEREREKEKEKERER
EKQKQKESEKERESTKEKGKHEDGRKKEAEVIKQLKADLKKAQESQKEMKLLLDMYRSAP
KEQRDKVQLMAAEKKAKAELDELRQRVKDLEDKEKKESKKMADEDALRKIRAVEEQIEYL
QKKLAMAKQEEEALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIH
KLLKEEKEELADQVLTLKTQVDAQLQVVRKLEEKEHLLQSNIGTGEKELGLRTQALEMNK
RKAMDAAQLADDLKAQLELAQKKLHDFQDEIVENSVTKEKDMFNFKRAQEDISRLRRKLE
TTKKPDMVPNCDEILMEEIKDYKARLTCPCCNMRKKDAVLTKCFHVFCFECVKTRYDTRQ
RKCPKCNAAFGANDFHRIYIG
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggatcggcaacaagcgggcggccacagagcctggcccttctgggcccccagag
aaaaaggcaggggtcgaagactcaggaaccacagtggagaccattaagttaggaggtgtt
tcctcaacggaggagctggacatccggaccctgcagaccaagaaccgaaagctggcggag
atgttggaccagcggcaggccatcgaggatgagctgcgtgagcatattgagaagctggag
cggcggcaggccaccgatgatgcctctctgctgattgtgaaccgctactggagtcagttt
gatgaaaatatccgcatcattcttaaacgctatgacctggagcaaggtcttggagacctt
ctgtctgaacgaaaagccctggtggtgccagaaccagaaccagactcagacagcaatcag
gaacgtaaggatgagagggagcgaggggaagggctggagccagcattctccttcctagct
accctggccagcagtaccagtgaggagatggagtctcagctgcaggagcgtgtggagtcc
tcccgccgagctgtcgcccaaattgtgacaaagtatgacaagcttcaggagaagatggac
atgctgtctcacaagctaaatagtggagatgcgtcattggtggatgaagcagtccaggaa
ctaaattcctaccttgcacatgaaaatggacggctgcaggaactggctgatctactccag
gaaaagcaccgaatcatgtctcaagagttctccaagttgcaggagaaagtagagatggca
gagtcgcgggtgtgcgtgctggagaccatgatcgacgaccttcagtgggatattgacaag
atccgcaagagagagcagcggctcaaccgacacttggctgatgtgctggaacgggtgaat
tcaaaaggttacaaggtatatggcgctgggagcagtctctacgggggtacgatcaccatc
aatgctcgcaagtttgaggaaatgaacgctgagctggaggagaacaaggagctggctggg
aaccgccacagtgagctggaaaaattgcgccaggatctcgaagaggtgacgacacagaat
gataaactgaaggtggagttgcggagggcggtggaagaggctgtgaaggagactcctgag
taccgctgcatgcagtcccagttctcggtcctgtataatgagagtctccagctgaaggca
catctggatgaggcacgcactctgcttcacggcactcgcagcacacaccagcgccaggtg
gaactcattgagcgggatgaggtcagcctccacaagaagctgcgcacagaggtgatccag
ctagaggacactctggcacaggtccgcaaggagtacgagatgctgaggatagagtttgaa
cagactcttgctgccaatgaacaagcaggtccaataaatcgggagatgcgtcacctcatc
agcagcctccagaatcacaaccaccagctgaagggggaggtgctgaggtacaagcgcaag
ttgagggaggcccagtccgacctgagcaagactcgctcccgcagtgggagtgccctcctg
cagtcccagtccagcactgaagagaccaaggaggaaccaccggaggtcaaacaggagcct
gatgattcctctgctcaggcatctgtgcccaaggctgcccccgaggatgccagtgatgcc
aaggccaagcgagatgaagaggagagggagcgcgagaggcgggagaaggagagggagcgt
gagaaggagaaagagaaggagagagagcgggaaaaggagaaggagaaagaacgggagcgg
gagaagcagaagcagaaggagtctgagaaggagagagagtccaccaaggagaaagggaag
catgaggatgggaggaagaaagaagctgaagtgatcaagcagctgaaggctgatctcaag
aaagcccaggagagccagaaggagatgaagttgctgttagatatgtaccgctcggcccca
aaggagcagagagacaaggttcagctcatggcagctgagaagaaggccaaagctgagctg
gatgagctgaggcagagggtgaaggacctggaggacaaagagaaaaaagaaagtaaaaaa
atggcagatgaggatgccctacggaagatccgggcagtggaggagcagattgagtatctg
cagaagaaactagccatggccaagcaggaagaagaggccctgctttcagaaatggatgtc
actggacaagccttcgaggatatgcaagagcagaacattcgccttatgcagcagttgcgg
gagaaggatgatgccaacttcaagctgatgtcagaacgcatcaagtcaaaccagatccat
aaactactgaaggaggagaaggaggagctggcagaccaggtcctgaccctgaagacgcag
gtggatgctcagttacaggttgtgcggaagctggaggaaaaggaacacctgctacagagc
aatataggcactggagagaaggagctaggcctccgaacccaggcgctggagatgaacaaa
cgcaaggcaatggatgcagcccagcttgcagatgatctcaaagcacaattagagctggct
caaaagaaactacatgactttcaggatgagattgtggagaacagtgtgactaaagagaag
gatatgttcaacttcaaacgggctcaggaggacatctccaggttgcgtaggaagttggag
accacaaagaaacccgatatggtgcccaactgtgatgagatcttgatggaggagatcaag
gattacaaggcgcgtctgacctgtccctgctgcaacatgcgtaagaaggatgctgtgctc
accaagtgctttcacgtcttctgctttgagtgtgtgaagacgcgctacgacacccggcag
cgcaagtgccccaagtgtaatgctgcctttggtgccaatgacttccatcggatctacatc
ggatga
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integrated database retrieval system
