Trachemys scripta elegans (red-eared slider): 117879040
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Entry
117879040 CDS
T07347
Symbol
SNCAIP
Name
(RefSeq) synphilin-1 isoform X1
KO
K04558
synphilin-1
Organism
tst
Trachemys scripta elegans (red-eared slider)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SNCAIP_SNCA_bd
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
117879040
NCBI-ProteinID:
XP_034629816
LinkDB
All DBs
Position
6:72990612..73092554
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AA seq
963 aa
AA seq
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MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQNEDRSVSSTSWSCGVSTLIGNA
QKPTGIADMYSKFRPVKRVSPLKHQPDSSENNESDDQKNQKVEYQKGSDSHPTSQNDDQC
SGDGEGLKSKSIESGVLLGELEHYDLDMDEILDVPYIKSSQQLAAFTKVAPEKRILGVCS
TVNGLSGKTCSAGNSENLPASTTQFCVLSPVKSSQMRNAQSIVLNQHKHLAEELELSQPL
VKCSSVHETEAQSKGFLNRTFTDPQAHKPEKTMPNCQLRTFHLQTAVTENKLDELNSNMN
WSSSGGPEERGEDVKKNKSILNIVKEGQISLLPHLAADNLDKIHDESENNLLHIAASQGH
AECLQHLTSLMGEDCLNERNNEQLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDHPS
LIHYAGSYGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHIAAQHGYLGCIQTLVEYGAN
VTMQNRAGEKPSQSAERHGHTMCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQNQ
LQQLLEAQRSEGQSLPTSPSSSLSPASGKPQWKASDADDLSLPKSKLNTQDGIQILGSIG
TSSHTRSKMKDEDSDKILRQLLGKEISENVCMQEKLTLEFQDVHASSKNVKKILPEKREL
KLARLRQLMQRSLSESDTDSNNSEDLKNTPVKRTDKPRPQPIVESVESTESLHLMIKKHT
LAAGRRFPFGIRASKSVDGHSPSPSSESSDPDNEPQDQSGTASQSQVSGDTSQSSTDSAT
VQKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQTEIELNEEKDKDRSKAPQRA
PASTEPGDQLKRPFGTFRSIMETLSGNQNNNNNCQTANLMKTSSTLPFTSLGRKATDSKG
NPAAPSKGKNKTGPYSSYTNLSSSMLIEDRLCNYAWHNDINRKSLKSYSQKSIEEPELQE
FFL
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaataccttgatttggatgaaatagattttagtgatgatatatcttac
tcggtaacttctctcaagactatcccagaattatgtagaaggtgtgattcgcaaaatgaa
gacagatcagtttcaagcactagctggagctgtggagtttcaactcttattggaaatgca
caaaaaccaacaggaattgcagacatgtacagtaagttcagaccagtgaagagggtttcc
ccactaaagcaccagccggatagctcagagaacaatgaaagtgatgaccaaaagaaccag
aaggtggaataccagaaaggtagcgattctcaccccacatctcagaatgatgatcagtgt
tcaggagatggagaaggccttaaaagtaaaagcattgagtctggtgttttgcttggggag
cttgagcactatgacctggacatggatgaaattttggatgtgccttacattaaatcaagc
cagcaacttgctgcttttaccaaggtggctccagagaaaaggattttgggtgtatgttca
acagtgaatggtctgagtggcaagacctgctctgcaggaaacagtgagaacttgccagcc
agcacgacacagttttgtgttctgtcccctgtgaaaagctctcagatgagaaatgcgcag
tccattgtccttaatcagcacaagcatttagctgaagaattagagctttcccagcctcta
gttaaatgtagctcagtccatgaaactgaagcccagagcaagggcttcctcaacaggaca
tttaccgatccccaagctcataaacctgagaagacaatgccaaactgccagctgaggact
tttcatctgcagacagccgtgacagaaaacaaacttgatgaactgaacagtaatatgaac
tggagcagctcaggaggcccagaggaaaggggtgaagatgtgaaaaaaaataaaagcatc
ttaaacattgtgaaagaaggacagatatcattattgccacacctagcagcagacaatctg
gacaaaattcatgatgaaagtgaaaacaatctgttgcacatagcagcatcacagggacat
gcagagtgcttgcaacatctcacttctttgatgggagaagactgtttgaatgagcggaac
aatgaacaactaacaccagctgggttagcaataaagaatggtcaactggagtgtgtacgg
tggatggtgagcgaaacagaagccattgctgaattaagttgctcaaaagatcacccaagt
cttattcactatgcaggttcctatggtcaggagaaaatacttctgtggcttctccagttt
atgcaagaacaagggatttctttggatgaagttgatcaggatggaaacagtgcagtacat
atagctgcccagcatggctatttaggatgtatacagacattggttgaatatggagcaaat
gtcaccatgcaaaaccgtgctggagagaaaccttcacaaagtgctgaacgacatggacac
accatgtgttcccgttacttagtggttgtggagacatgcatgtcattggcatctcaggtt
gtcaagttaactaaacaactaaaggagcagacagtagaacgtgtgacattacagaaccaa
ctccagcagcttttagaagcccagagatcagagggccaatcactaccaacatccccaagt
tcatcattgtcccccgcttctggaaaacctcagtggaaagcctctgatgcagatgattta
tctctaccaaaaagtaaattgaacacccaagacgggattcagattcttggcagcatagga
acttccagccatactcggtccaagatgaaagatgaggactcagataaaatcctgcgccaa
ttgttggggaaagaaatctctgagaatgtctgtatgcaggagaagctgacactggaattt
caggatgttcatgcttcctccaagaatgtgaagaagattctaccagagaaaagggagctg
aagttagccagactgaggcagcttatgcagagatccctcagcgagtctgatacagactca
aataattctgaggacctgaagaatactcctgtgaaaagaactgacaaaccaagaccacaa
cccatagtagaaagtgttgaaagcactgagagtttgcatctgatgattaagaaacacact
ttggcagcagggcgccggtttccttttggcattagagcttccaaatctgtggatggccac
agcccgtctccctcttcagagagcagcgatcctgataacgaaccccaggatcagtctggg
actgcatctcagagccaggtttctggagatacctctcagtccagcactgacagtgccact
gttcaaaaggttgctactagtcctaagagtgccctcaagtctccatcttcaaagcgcaga
acctcccagaatttaaaactcagagtaacctttgaggagcccgtggtgcagatggagcaa
acagagattgaactgaatgaggaaaaggacaaagaccggagcaaagcgcctcagcgggct
ccagccagcactgaacctggggatcagctgaaaaggccatttggaacatttagatctata
atggagactctaagcgggaaccagaacaacaacaacaactgtcaaacagcaaacctgatg
aaaacctcatcaacattgccctttacctcattaggaagaaaggctacagatagcaaggga
aatccagcagctccttctaaaggaaaaaataagacagggccttactccagctacaccaat
ctttcctctagcatgctgattgaagaccgtctgtgtaactatgcatggcataatgacatc
aataggaaaagtctgaaatcttacagccaaaaaagtattgaagagccagagctgcaggaa
ttcttcctctaa
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