Trachemys scripta elegans (red-eared slider): 117879165
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Entry
117879165 CDS
T07347
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04068
FoxO signaling pathway
tst04110
Cell cycle
tst04120
Ubiquitin mediated proteolysis
tst04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117879165 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
117879165 (SKP2)
04150 mTOR signaling pathway
117879165 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117879165 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117879165 (SKP2)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117879165 (SKP2)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_9
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
117879165
NCBI-ProteinID:
XP_034630050
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All DBs
Position
6:22547064..22569756
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AA seq
426 aa
AA seq
DB search
MPLRQATMHRRHLQEIPAADSNVSTSFTWSWDPTKTSELLSGMGVSVLKKEKLGSENTPQ
ELLVSLYPPQKRQKVKEKDKDFVIARRPRLLRETESGISWDALPDELLLGIFAYLPLADL
LKVSQICKRWQRLAFDESLWLTLDLTGKNLLPGVIGQLLPVGVTVFRCPRSCIGKPLFKN
NRPLRVQHMDMSNCTINVADLHTVLCRCDRLQNLSLEGLVLSDDIIRSIAQNSSLVRLNL
SGCSEFSAEALEIMLISCSGLEELNLSWCDFTTDHIKAAVNHISANVTQLNFSGYRQSLQ
ISDIKTLVTRCPYLIQLDLSDSAMLKPECFQYFHQLICLQHLSLSRCYQISPADLLELGE
IPTLKTLQVFGIVTDNSLQLLKETLPHIKINCSHFTTIARPTVGSKKNQEIWGIKCRLTL
RNPSGL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcgccaggccaccatgcacaggagacatctccaggaaatcccagctgcagac
agcaatgtttccacaagcttcacatggtcatgggaccccaccaagacatcagagctactc
tccggcatgggagtgtctgtccttaagaaagagaagctgggcagtgagaacacccctcag
gagctgctagtgtctctttatcctcctcagaaacgacagaaagtgaaagagaaggacaag
gactttgtgattgcacgcaggcctaggctgctccgagagacagagtcaggtatttcttgg
gatgcactgccagatgaattgctattggggatctttgcatacttacccctagctgacctg
ctaaaagtttcccagatttgcaagaggtggcaacgcctagcgtttgatgaatcgctctgg
ctgacacttgatctgactggtaaaaatctgctgccaggagtgattgggcagttgctccct
gtaggtgtaactgtattccgttgtccaagatcctgtattgggaaaccactgtttaaaaac
aaccgacctcttagagtgcaacatatggacatgtccaactgcacaataaatgttgcagat
ctccatactgttctttgtcgttgtgatcgactacagaacctcagcttggaaggactggtg
ctttctgatgatatcattagaagcatcgctcagaattccagtttggtgcgattaaatctc
tctggatgttctgaattttctgcagaagcattggagataatgttgatcagctgttctgga
ttagaagagctaaacttgtcctggtgtgacttcacaactgatcacattaaagcagcagtc
aaccacatttctgcaaatgtaacccaactaaattttagcggatacagacaaagtctacag
atatcagatatcaagacattggtgacaagatgcccttatctcatccagttagatttaagt
gacagtgcaatgttgaagcctgaatgttttcaatattttcatcagctcatctgcctacag
catttgtctcttagtagatgttatcagatatctcctgctgacttacttgagcttggtgaa
attcccacactaaagactcttcaagtttttggaatagtgactgacaattccctacagctc
ctaaaagaaacgcttccccacataaagatcaattgttcgcattttacaaccattgcacgg
ccaactgttggcagcaaaaagaaccaggagatctggggcatcaaatgcagactgacactg
agaaatcccagtggtttgtga
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