Trachemys scripta elegans (red-eared slider): 117879198
Help
Entry
117879198 CDS
T07347
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117879198 (AFF3)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
117879198 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
117879198
NCBI-ProteinID:
XP_034630144
LinkDB
All DBs
Position
1:complement(230523214..230713314)
Genome browser
AA seq
867 aa
AA seq
DB search
MTHSWPPPLSAIHTPGKVEQSKFPFANKESQQVSTGHSNPRKGDAEPKNPENSASHTSML
EDDLKLSSDEEENNQQAAQRSALRVLSDSIVVPQPSSRTSGLSSKRSSSSSSSESESSSE
SDSESESSSCESDGSKPSHYSSPEPEQPSSNKWQLDKWLNKVNPHKTSILNQNDKHGLES
NQYYSRIKDEGQECEKIPAICQTDLRDKEIKNPSKEELRPRTANKAPGNKGGKQKSPPTA
AAVSGDSSPQRRTTCKKQPRRTERTSGGDALNCHTSEDLALSQVVLENNICEQPKARPCN
NRTGHRKEPRSVAACEKRRTRGPSKTAPKSKEFIETESSSSSSSSDSDSESEQEEYPLPK
PQTVASASGGSDQRLKDSVSSNTNKTNSSCSAFGSINARTSNDIAKELEEQFYTLVPFGR
NELLSPLKDSDEVKSLWVKIDLTLLSRVPERLPEESLAMSTGGKEEASLQQNNCTYPPAE
KVVPKSRRKRKCENEEEDREIKKTHLERECSSRLIASAPGISTANHCNRNEHSLAMPINK
NEKMLRSPISPLSDASKHKYSTDDLTSSSRPNGSSLLPSLSSSKKHKSEIQPQPHPADCN
KAVHINSESVLCNKPHSQTEPWPSLSRAHKDCRRTKLIFDNIPRNADHFMQEAKRKKHKA
DAMVRTFSFQLCCSVLFLYAVRLKTHAGPNATPEDKQLAALCYRCLALLYWRMFRLKRDH
AVKYSKALIDYFKNSSKAAQAPSPWGASGKSTGTPSPMSPSPSPVSSVGSQGSTGAPSPS
STISIPQRIHQMAANHVSITNSILHSYDYWEMADNLAKENREFFNELDALMGPVTLHSSM
EHLVQYTQQGLHWVRSSAHAKDCVPFK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgacccattcttggcctcccccactctcagctattcacacacctggaaaagtggaacag
agcaagtttccatttgcaaacaaggagtcgcagcaggtgtctacaggacacagcaatcca
aggaaaggtgatgctgagccaaagaatccagaaaacagtgcatcacatacatcaatgcta
gaagatgacctcaagttaagtagtgatgaagaagagaataatcagcaggcagcacagaga
tctgctctccgcgttctgtctgacagcattgtcgtgccgcagcccagtagcagaacctcg
gggctctccagcaagaggtcaagcagcagcagctccagtgaatccgagagcagttccgaa
tctgactcagagagtgaaagcagttcctgtgagagtgacggcagcaagccctctcattac
tccagcccagagcctgagcagccatcatcaaacaagtggcagttggataaatggctaaat
aaagttaatcctcacaaaacatctattcttaaccaaaatgataagcatggactggagagc
aatcagtattacagcagaataaaggatgaaggacaggagtgtgagaaaataccagctatt
tgccaaactgaccttagagacaaggaaattaagaaccccagcaaagaggagttgaggcct
agaactgctaataaagctccaggaaataaaggagggaagcagaaatcacctcctacggct
gctgctgtttctggagacagcagccctcagagaaggacgacttgtaagaaacagccaaga
agaacagagaggacctctggtggggatgcgttgaactgccatacatctgaggatctcgct
ttgagccaagtagttttggaaaataacatctgtgaacaacctaaagccaggccctgcaac
aacagaactgggcacagaaaagagccccgctctgttgctgcgtgtgaaaagagacgtacc
agagggccaagcaaaactgcccccaaatccaaggaatttatcgagacggagtcttcgtct
tcatcatcttcctcagattcagattcagaatccgaacaagaggaatatcctctgcccaaa
cctcaaactgtggcctctgcttcaggtgggagtgatcagaggttgaaggactccgtgagc
agtaacaccaacaaaactaacagcagctgcagtgcctttggctccattaatgccaggact
agtaatgatatagcaaaggagctggaggaacagttttatactctagttccttttggcagg
aatgagctcctgtctcctctgaaagacagtgatgaggtaaaatcactgtgggtcaaaatt
gatttgactcttttgtccagagttccagaacgtttacctgaggagtcattggcaatgagc
actggaggaaaagaagaagccagccttcagcagaataattgtacttacccaccagcagaa
aaggttgtgccaaaatctagaaggaaacgcaagtgtgaaaatgaagaagaggacagggag
atcaagaagactcatttagagcgagagtgttcttcacgattaattgcctctgccccaggt
atttcaacagcaaatcattgcaacaggaacgaacatagcttggcgatgccaataaataaa
aatgagaaaatgcttcggtcacccatctcacccctctctgatgcatcaaaacacaaatac
tccactgatgatttaacttcttccagtagacctaatggcagcagtctattaccttccttg
tcctccagcaaaaaacataagagtgaaatccagccacagccacatcccgcagactgcaat
aaagcagttcacatcaattcagaaagtgttctctgcaacaagccacactcccaaacagag
ccttggccatctttatccagggcacacaaagactgcagaagaacaaagctcatctttgat
aatataccacgcaatgcagatcactttatgcaagaagctaaacggaagaagcataaagca
gacgcgatggtgagaacattttctttccagttatgttgttccgtattatttttgtatgct
gtgagactaaaaacccacgcaggccctaatgccactccagaggacaaacagctagcagca
ttatgttatcgctgtttggcacttctatactggagaatgttccgactcaaaagagatcat
gctgtaaagtattcaaaagcacttattgattatttcaagaattcatcgaaagctgcccag
gctccatctccatggggtgccagtggaaagagcacaggaactccatcccccatgtctcct
agcccttctcctgtcagctcagtaggatcccaggggagcactggtgccccttccccctct
tccactatcagcattccacagcgtattcatcagatggcagccaatcacgtcagtattacc
aacagcatcctgcacagctatgactactgggagatggctgacaatctagccaaggaaaat
agagagttttttaatgagttggatgcactgatgggacctgtcaccctacacagcagtatg
gaacatttagttcagtacactcaacaaggacttcactgggtacggagtagtgctcacgca
aaagactgtgtgccattcaaatga
DBGET
integrated database retrieval system
