Trachemys scripta elegans (red-eared slider): 117879226
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Entry
117879226 CDS
T07347
Symbol
NEDD4L
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04120
Ubiquitin mediated proteolysis
tst04144
Endocytosis
tst04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117879226 (NEDD4L)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117879226 (NEDD4L)
09144 Cellular community - eukaryotes
04530 Tight junction
117879226 (NEDD4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117879226 (NEDD4L)
04121 Ubiquitin system [BR:
tst04121
]
117879226 (NEDD4L)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117879226 (NEDD4L)
Membrane trafficking [BR:
tst04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117879226 (NEDD4L)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
HECT type E3
117879226 (NEDD4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
117879226
NCBI-ProteinID:
XP_034630147
LinkDB
All DBs
Position
6:18619054..18956648
Genome browser
AA seq
1286 aa
AA seq
DB search
MAHRLRFHFGSGRSNTAPESEILDREREDDFFMAFHTLPRRNSPHPFSRHGADYGGGDLQ
EVGSLKRSTSMFIPQLLNNIEVRPTRSSSMQISLQRKAVNGCADECGAPESPEETLPCKF
SDFREHYTCPVDSHSFSPSSPQVTPENSPPRMPEETGQRLNGAVSCNHRIFCTIPSNNQN
DDVATTAEEDEASEAASGLNISGVRIQHRASSADMHQVMLSPFGSEVQDNAPASEPRRWS
LQHLPDTSANSGKKLFVFQLQQSQASGPGTGSDYNFGFTGTKGNRLVRYPRIRLERSTSY
PVQPQPEQISLVEGGGNSELHGNSRNGSEISRSNSVERIPQGQGCLFKIRPDQNTRQQHF
RILVTRGTEEQNQVPDEDVPDTSGHTVTSATTRDDFLGQVDVPLNHLPTEDPTMERPYTF
KDFLLRPRSHKSRVKGFLRLKMAYMPKNGGQEEETTEQREESERAWEVVDSNDSVSHHQE
ELPPPPLPPGWEEKVDNLGRTYYVNHNNRTTQWHRPSLIDVASDSDNNIRQINQEAAHRR
FRSRRHISEDLEPEPSESGDASEPWETISEEASLSGDSLSLSLPPPPASPVSRTSPQELS
DELNRRLQVTPDSNGEQFGSLIQRDPSSRLRSCSVTDAVAEQSHLSLQSGPSRRARSSTV
TGGEEPTPSVAYVHTTPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIMQLAEDGAVGS
AANSNNHLSEPQIRRPRSLSSPTVTLSAPLEFAKDSPVRRAVKDTLSNPQSPQPSPYNSP
KPQHKVTQSFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRLKFPVHLRSKASLNPNDLG
PLPPGWEERIHLDGRTFYIDHRSQVLICGDIDTRDLVPSYDSKITQWEDPRLQNPAITGP
AVPYSREFKQKYDYFRKKLKKPADIPNRFEMKLHRNNIFEESYRRIMSVKRSDVLKARLW
IEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSY
FTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLKDMESVDSEYYNSLKWILENDPT
ELDLMFCIDEENFGQTYQVDLKPNGSEIMVTNENKREYIDLVIQWRFVNRVQKQMNAFLE
GFTELLPIDLIKIFDENELELLMCGLGDVDVNDWRQHTIYKNGYCPNHPVIQWYWKAVLL
MDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGSPEKLPRAHTCFNRLDLP
PYESFEDLREKLLMAVENAQGFEGVD
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggcccatcggctgcggtttcattttggctctggacgaagcaacacggcccctgaatct
gagatcctagaccgagagagagaagatgactttttcatggcattccacactttgccaaga
agaaacagtcctcatcctttctcccgacatggagcggattatggtggcggtgatttgcaa
gaagtgggctccttaaaaagaagcacatcgatgtttattcctcagctgctgaacaatatt
gaggtgcgtccaacaaggagctcatctatgcagatttctcttcagcgcaaagctgtgaat
ggctgtgctgatgagtgtggagccccagagtctcctgaggagactcttccatgtaaattc
tcagacttcagggagcattacacgtgcccagttgacagtcattctttttctccaagcagt
ccacaagtaaccccagagaattctccaccgaggatgcctgaagagactgggcaacggctt
aatggagctgtttcctgtaatcacagaatattttgtacaattccttccaataaccagaat
gatgatgttgcaacgactgccgaagaagatgaagcaagtgaagcggcttcagggttaaac
ataagtggtgtaagaattcagcatcgcgcttcaagcgcagatatgcatcaggttatgcta
tcgccctttggttccgaggttcaggataacgcccctgcctctgaacccagacgctggtct
ttgcagcatctgccagacacgtcagcaaattcagggaaaaagttgtttgttttccagttg
cagcaatcacaggcaagtggtccaggtacaggaagcgactataattttggttttactggc
acaaaaggaaatagattggtcaggtatcctcgcatacggctggagaggagtacttcctac
cctgtccagccgcaaccagaacaaattagccttgtagaaggcggagggaattcagaactg
catggaaatagcagaaatgggtcagaaatatctagaagcaattcggtagagaggattcct
caagggcagggatgcttgtttaaaatcagaccagatcaaaacacaaggcagcaacacttc
agaattcttgtaacccgtggtactgaagaacaaaatcaagttcctgatgaagacgtccct
gatacctctgggcatacagtgaccagtgccacaactagagacgacttcctgggtcaagtg
gacgtgccacttaatcatctaccgacagaagacccaaccatggaacggccatacacattt
aaggatttccttctcagaccaagaagccacaaatctcgggtaaagggtttcttaagactg
aaaatggcctatatgccaaaaaatggaggacaagaggaagaaactactgaacaaagggag
gaatctgagcgtgcatgggaggtggttgactccaatgactctgtatctcatcatcaagag
gagttaccacctcctccactgcctcctggatgggaagaaaaagtggacaatttgggacgt
acttactatgtcaaccataacaacaggacaactcagtggcaccgaccaagtttaattgac
gttgcatctgattctgacaacaacatcagacagataaaccaagaggcagcccatagacgg
tttcgttctcggagacacattagtgaggatttggagcctgagccttcggagagtggagat
gcatctgaaccctgggaaaccatttcagaggaagcgagtctaagtggagattccttaagc
ctgtcactgccaccacccccggcttctccagtctctcggaccagtcctcaggagctgtct
gatgaattgaacagaagacttcaggtcactcctgattccaatggggaacaatttggttct
ttgattcagagagatccttcttcaagattgagatcttgcagtgtaacagatgcagttgct
gaacagtctcacttatcactgcagagtggtccatctaggagagctcgttcttcaactgtc
acaggtggtgaagaaccaacgccatcagtggcctacgtacatactacaccaggcttacct
tcaggctgggaagaaagaaaagatgctaagggacgtacatattatgtcaatcataacaat
cgaaccacaacttggactcggcccattatgcagcttgcagaagatggtgcagttgggtca
gcagcaaacagtaacaaccatctaagtgagcctcagataaggcggcctcgtagcctcagc
tcacccacagtaactttatctgctccacttgagtttgccaaggactcgcctgtgcgcaga
gctgtcaaggacaccctttccaatccacagtctccacagccgtcaccctataattctcct
aagccccaacacaaagtgacacagagcttcttgccacctggttgggagatgagaatagct
ccaaatggcaggcccttcttcattgatcataatactaagactaccacatgggaagatcca
cggctgaaatttccagtgcatttgagatcaaaagcttctttgaaccctaatgatttgggc
cctcttcctcctggttgggaggaaagaatccatttggatggaagaacattttatatagat
catagaagccaggtgttgatatgtggagacattgataccagagacttagtgccctcatac
gatagtaaaattactcagtgggaagaccccagattgcagaaccctgctattactggtcct
gctgttccctattccagagagttcaaacagaaatacgattacttcaggaagaagttaaag
aaaccagctgatattccaaacagatttgagatgaaactacacagaaacaatatttttgag
gaatcctatagaagaatcatgtctgtgaagaggtctgatgtactaaaagccagactctgg
attgaatttgagtcagaaaaaggacttgactatggaggcgtggctagagaatggttcttc
ctgttgtctaaggagatgtttaatccttattatggtctctttgaatattcagcaacggac
aactatacccttcagattaatcccaattcaggtctttgtaatgaagatcatctgtcctat
ttcacgtttattggacgagttgctggcctggcagtgtttcatgggaagctattagatggc
ttcttcatcaggcctttttataagatgatgctagggaaacaaataacgctgaaagacatg
gagtcagtggatagtgaatattataactctttgaaatggatcctggaaaatgaccctacg
gagctggatctcatgttttgcatagatgaggaaaactttggacagacgtatcaagtcgat
ttgaagccaaatgggtcagaaatcatggtaacaaatgaaaacaaaagggaatatattgac
ttagtcatccagtggaggtttgtaaacagagttcagaaacaaatgaacgctttcttggag
ggattcacagaactccttcctatagacttgattaaaatttttgatgaaaatgagttggag
ttattaatgtgtggccttggcgatgttgatgttaacgactggagacaacacacaatctac
aagaatggttactgcccaaatcatcctgtcatccagtggtactggaaggctgtcttactg
atggacgctgaaaagcgtatccggttgttgcagtttgttactgggacatcacgagtgcct
atgaatggatttgctgaactttatggttcaaatggtcctcagctgtttacaatagagcaa
tggggaagtcctgaaaaattgcccagagctcacacatgctttaatcgccttgacttacct
ccttatgaatcttttgaagatttacgagagaagcttcttatggcagttgaaaatgctcaa
ggatttgaaggagtggattaa
DBGET
integrated database retrieval system
