Trachemys scripta elegans (red-eared slider): 117879230
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Entry
117879230 CDS
T07347
Symbol
ITGA2
Name
(RefSeq) integrin alpha-2
KO
K06481
integrin alpha 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03271
Virion - Rotavirus
tst04145
Phagosome
tst04510
Focal adhesion
tst04512
ECM-receptor interaction
tst04810
Regulation of actin cytoskeleton
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
117879230 (ITGA2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117879230 (ITGA2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117879230 (ITGA2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117879230 (ITGA2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117879230 (ITGA2)
04810 Regulation of actin cytoskeleton
117879230 (ITGA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117879230 (ITGA2)
04515 Cell adhesion molecules [BR:
tst04515
]
117879230 (ITGA2)
04090 CD molecules [BR:
tst04090
]
117879230 (ITGA2)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117879230 (ITGA2)
Exosomal proteins of bladder cancer cells
117879230 (ITGA2)
Cell adhesion molecules [BR:
tst04515
]
Integrins
Integrin alpha subunits
117879230 (ITGA2)
CD molecules [BR:
tst04090
]
Proteins
117879230 (ITGA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
VWA_2
Integrin_A_Ig_1
FG-GAP_3
FG-GAP_2
Integrin_alpha
FN3_IL27B_N
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
117879230
NCBI-ProteinID:
XP_034630159
LinkDB
All DBs
Position
6:30152070..30253244
Genome browser
AA seq
1178 aa
AA seq
DB search
MEPGGMWLSLLLLSQGILHNCCEAYNVGLPEAKLFSGPSSEQFGYAVQQFINHQGKWLLV
GSPWSGYPSNRMGDIYTCPVDSLETTCKKLNLQTLTRIPNVTEIKEQMNLGLTLIRNSKT
GGFLTCGPLWAQQCGSQYYATGVCSEISPSFQILRSFSPALQNCSSFIDVVVVCDESNSI
YPWTAVSAFLTKFVQGLDIGPTKTQVGLIQYGNDPRVVFNLNTYKTKDDVVKAMSQTFQK
GGDLTNTFKAIDYARRQAFSSESGGRPTATKVMVVVTDGESHDGSSLKEVITKCNEDKIT
RFGIAVLGYLIRNELDTKNLIKEIKGIASLPTEKYFFNVSSEAALLEEAGTLGERIFSIE
GTDQGDTFQMEMSQVGFSAYYSQKKDVLMLGAVGAYDWSGTVVQETSNQVTTFPNQAFEK
ILQDRNHSSYLGYSVAIISTQNTVYFVAGAPRSNYTGRVVVYDIDSHGRVMVVQSQRGDQ
IGSYFGSVVCAVDVNRDSVTDVLLVAAPMFMNELKKEEGRVYMFSITKGILDQQELLEGP
QGLENARFGSAMATLSDIDLDGFNDVIIGAPLENQNSGAVYIYNGNLRTIRTKYSQKILG
SNSAFGQPLLYFGRSVDGHRDLNGDGITDVSIGADGNVVQLWSQSIANVSIRASFVPEKI
SLLNKNTEIAVKICFSAKFRPANRNNQVDIRYNATLDADLQSSRVTSRGLFKENNERYIQ
KNIVVSSAETCVEHIFNVQEPSDAVNSLSLRIDISLKNPGSSPVLDIYSPATVAYSIPFV
KDCGEDELCISDLVLEVQQKTDDGKRPFIVSSKNRRLTFSVKLRNKKENAYNTRIQATFS
ENLFFASSSLPADGTEISCQMGTGHKSVICQVSYPVFKVGQQVYFDINFDFNLKNLQDMA
KISFHALSESNEEQEADNQVYLSIPLRYDAEIHLTRLTNINFYEVYSDRNIPSTVNNFEE
IGPAFNFSVKVTTGSIPVKVASVKIHFPESTKGNNPLMYLTALDTDQAGGVSCDAKINPL
QIGKTSYSASFKKENFRAAKELNCKNTHCNTITCSLKDLTLKGEYFVNVSTRIWNGTFAA
STFQMLQLTADAEIDTHNPELFVIGENTLTIPVTIMKPEEKAEVPIGVVIGSILAGLLLL
LALVAVLWKLGFFKRKYEKMTKDVEDIDEITELTKDKD
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggcggcatgtggctctctctgctcctcctcagccaaggcattcttcataat
tgctgtgaagcatacaacgttgggctcccagaagcaaaattgttttctggtccttcaagt
gagcagtttggatatgcagttcaacagtttataaatcatcaaggcaaatggctgcttgtt
ggctcgccatggagtgggtatccatctaacagaatgggagatatctacacatgtcctgtt
gactcacttgaaaccacatgtaaaaaactgaatttacaaactttaacacgcatcccaaat
gttactgagataaaggaacagatgaaccttggcttgacactaataagaaactcaaaaact
ggaggatttttgacttgtggtcctttgtgggcccagcagtgtggaagtcagtactatgca
acgggagtctgttctgaaatcagtccaagtttccagatcttaagaagcttttcacctgct
cttcaaaactgttcctccttcatagatgttgttgttgtgtgtgatgagtcaaacagcatt
tatccgtggactgcagtgagtgcgtttttgacaaaatttgtccaaggcttagatataggc
cccacaaaaactcaggtgggcttaattcagtatggtaatgatccaagggtagtgttcaac
ttgaatacctacaaaacaaaagatgatgttgttaaagcaatgtcacagacctttcaaaaa
ggaggagacttgactaatactttcaaagcaattgactatgcaagacgtcaggctttttcc
tctgaatctggtggacggcccacagccacaaaagtaatggtcgttgtgacagatggtgaa
tcacatgatggctcaagtttgaaagaagtgataactaaatgcaatgaggacaaaataacc
agatttggcatagctgttttgggatacttaatcagaaatgaactcgatactaaaaattta
attaaagaaatcaaaggaattgcgagtcttccgacagaaaagtatttttttaacgtgtca
tctgaggctgcactattggaagaagcaggaacactgggagaacgcatatttagcatagaa
ggtaccgatcaaggtgatacattccaaatggaaatgtcacaagtgggcttcagtgcgtat
tactcacaaaaaaaggatgttctgatgctaggtgctgttggggcttatgattggagtggg
actgtagtccaggagacctcaaatcaagtgactacattccctaatcaagcatttgaaaaa
attctacaagacagaaaccatagctcgtatttaggttattctgtcgctattatctcaacc
caaaacactgtctattttgttgctggtgcgccaagatcaaactacactggcagagtagtg
gtttatgacattgacagccatggcagagtcatggttgttcagtcccagagaggggatcag
attggctcctactttggcagtgtggtgtgtgcagtggatgttaacagagattcagttaca
gatgtgctgctagtagctgcaccaatgttcatgaatgagctaaagaaagaagagggaaga
gtttatatgttttccatcacaaagggaattttggatcaacaagaactcttagaaggtcca
caagggttagaaaatgctcgatttggatctgctatggcgaccctttcagatattgatttg
gatggttttaatgatgtgataataggtgcacctttagaaaatcagaactctggagcagtt
tacatttacaatggcaatctaaggactatacgtaccaaatattcacagaaaattttagga
tcaaattctgctttcggacaaccactcctgtactttggaagatcagtagatggccataga
gacttaaatggtgatggcattacagatgtatctattggtgccgatggaaatgtggttcaa
ctctggtcacaaagcattgcaaatgtgtccataagagcatcatttgtacctgagaaaatc
agtctgctgaataagaacactgagatagccgtcaaaatatgtttcagtgccaagtttaga
cctgctaatagaaataaccaagtggatatcagatacaatgcaacactggatgctgatctc
cagtcatctagagtgacttctagaggattattcaaagaaaacaatgagagatatatacag
aaaaatattgttgtaagttctgcagagacctgtgttgagcacatctttaatgtacaggag
ccttctgatgctgtaaactcccttagtctgcgcattgatattagcctcaagaatcctggc
tccagtcctgtcctcgatatatattcacctgccactgtggcctacagtatcccttttgtt
aaggactgtggtgaggacgaactctgtatttctgatcttgttcttgaggttcaacagaaa
accgatgatggcaaacggccctttattgtcagcagcaagaacagaaggctaacattcagt
gtgaagctgagaaataaaaaagaaaatgcctacaacaccagaatccaggctacattttca
gaaaacttgttttttgcttcatcttctttaccagctgatgggactgaaatctcgtgtcag
atgggcactggccataaatcagtaatttgccaagtcagctatcctgtttttaaagtggga
caacaggtatatttcgatattaattttgactttaatctaaaaaatcttcaggatatggca
aaaataagttttcatgctttgagtgaaagtaatgaagagcaagaagcagacaaccaggtc
tacctgtcaattcctctgcggtatgatgcagaaattcacttaacaaggcttaccaacata
aatttctatgaagtatattctgatcgtaatattccttccactgtgaataattttgaagag
attggtcctgcgttcaatttttcagtgaaggttacaacgggaagcattccagtaaaggtg
gcttctgtaaaaatccattttccagagtcaactaaaggaaacaatcctctgatgtatcta
acggcactggatacagatcaggctggaggtgtcagttgtgatgcaaagattaatcctttg
caaataggaaaaacatcttattctgcatctttcaagaaagaaaacttcagagctgcaaaa
gaactaaactgtaagaatacgcattgtaatacaattacatgcagtctgaaagacctcaca
ctgaaaggagagtattttgtaaatgtgtctaccagaatctggaatgggacctttgcagct
tcaactttccagatgttacagctgacagcagatgcagaaattgatacgcataacccagaa
ttatttgtaattggagagaataccctaactatcccagtgacaataatgaagcctgaggag
aaagcggaggtgccaatcggagttgtgataggaagtatactggcaggactactattgctg
ttagcattggttgctgttttatggaagcttggcttcttcaagagaaaatatgaaaaaatg
acaaaggatgtagaagatattgacgaaattacagaactcacaaaggacaaagattga
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integrated database retrieval system
